RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 CD300LGQ6UXG3 332 aa19.47■□□□□ 0.71
MSH6-207ENST00000456246 SPATA31D4Q6ZUB0 917 aa19.47■□□□□ 0.71
MSH6-207ENST00000456246 CD302Q8IX05 232 aa19.47■□□□□ 0.71
MSH6-207ENST00000456246 DDX12PQ92771 950 aa19.47■□□□□ 0.71
MSH6-207ENST00000456246 PBXIP1Q96AQ6 731 aa19.47■□□□□ 0.71
MSH6-207ENST00000456246 ZNF707Q96C28 371 aaPredicted RBP19.47■□□□□ 0.71
MSH6-207ENST00000456246 UBQLN1Q9UMX0 589 aaKnown RBP19.47■□□□□ 0.71
MSH6-207ENST00000456246 MYH15Q9Y2K3 1946 aa19.47■□□□□ 0.71
MSH6-207ENST00000456246 A0A0B4J269 797 aa19.46■□□□□ 0.71
MSH6-207ENST00000456246 PPP6R2O75170 966 aa19.46■□□□□ 0.71
MSH6-207ENST00000456246 YEATS4O95619 227 aa19.46■□□□□ 0.71
MSH6-207ENST00000456246 POU2F2P09086 479 aa19.46■□□□□ 0.71
MSH6-207ENST00000456246 CYP3A5P20815 502 aa19.46■□□□□ 0.71
MSH6-207ENST00000456246 TKTP29401 623 aaKnown RBP19.46■□□□□ 0.71
MSH6-207ENST00000456246 UVSSAQ2YD98 709 aa19.46■□□□□ 0.71
MSH6-207ENST00000456246 SEZ6Q53EL9 994 aa19.46■□□□□ 0.71
MSH6-207ENST00000456246 SUGP1Q8IWZ8 645 aaKnown RBP19.46■□□□□ 0.71
MSH6-207ENST00000456246 LINC00301Q8NCQ3 95 aa19.46■□□□□ 0.71
MSH6-207ENST00000456246 MSTO1Q9BUK6 570 aa19.46■□□□□ 0.71
MSH6-207ENST00000456246 HAPLN2Q9GZV7 340 aa19.46■□□□□ 0.71
MSH6-207ENST00000456246 RPF1Q9H9Y2 349 aaKnown RBP19.46■□□□□ 0.71
MSH6-207ENST00000456246 IGSF9Q9P2J2 1179 aa19.46■□□□□ 0.71
MSH6-207ENST00000456246 LIMD1Q9UGP4 676 aa19.46■□□□□ 0.71
MSH6-207ENST00000456246 MUC6Q6W4X9 2439 aa19.46■□□□□ 0.71
MSH6-207ENST00000456246 ZNF318Q5VUA4 2279 aa19.46■□□□□ 0.71
MSH6-207ENST00000456246 H7C4K7 107 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 SPTLC2O15270 562 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 MEFVO15553 781 aaPredicted RBP19.45■□□□□ 0.7
MSH6-207ENST00000456246 FAM189A1O60320 539 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 XYLBO75191 536 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 C8AP07357 584 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 NMT1P30419 496 aaKnown RBP19.45■□□□□ 0.7
MSH6-207ENST00000456246 LRPAP1P30533 357 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 OR1D2P34982 312 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 PLA2G5P39877 138 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 BRCC3P46736 316 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 POU5F1Q01860 360 aaKnown RBP19.45■□□□□ 0.7
MSH6-207ENST00000456246 ALCAMQ13740 583 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 PPM1LQ5SGD2 360 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 SLC8B1Q6J4K2 584 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 DYMQ7RTS9 669 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 APPL2Q8NEU8 664 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 C18orf25Q96B23 403 aaPredicted RBP19.45■□□□□ 0.7
MSH6-207ENST00000456246 FAM122AQ96E09 287 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 KIF12Q96FN5 646 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 ASIC4Q96FT7 647 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 SUSD3Q96L08 255 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 LRRC27Q9C0I9 530 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 OLFML3Q9NRN5 406 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.45■□□□□ 0.73e-10■■■■■ 28.1
MSH6-207ENST00000456246 CDY1Q9Y6F8 540 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 ZDBF2Q9HCK1 2354 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 MYO10Q9HD67 2058 aa19.45■□□□□ 0.7
MSH6-207ENST00000456246 ADRB2P07550 413 aa19.44■□□□□ 0.7
MSH6-207ENST00000456246 PAX3P23760 479 aa19.44■□□□□ 0.7
MSH6-207ENST00000456246 MCM4P33991 863 aa19.44■□□□□ 0.7
MSH6-207ENST00000456246 ZBTB6Q15916 424 aa19.44■□□□□ 0.7
MSH6-207ENST00000456246 VARS2Q5ST30 1063 aaKnown RBP19.44■□□□□ 0.7
MSH6-207ENST00000456246 ZNF720Q7Z2F6 126 aa19.44■□□□□ 0.7
MSH6-207ENST00000456246 SFR1Q86XK3 245 aa19.44■□□□□ 0.7
MSH6-207ENST00000456246 FBXL6Q8N531 539 aa19.44■□□□□ 0.7
MSH6-207ENST00000456246 FEZF2Q8TBJ5 459 aa19.44■□□□□ 0.7
MSH6-207ENST00000456246 NXPE3Q969Y0 559 aa19.44■□□□□ 0.7
MSH6-207ENST00000456246 CUEDC2Q9H467 287 aa19.44■□□□□ 0.7
MSH6-207ENST00000456246 MRPL44Q9H9J2 332 aaKnown RBP19.44■□□□□ 0.7
MSH6-207ENST00000456246 EPS15L1Q9UBC2 864 aa19.44■□□□□ 0.7
MSH6-207ENST00000456246 EXOC7Q9UPT5 735 aa19.44■□□□□ 0.7
MSH6-207ENST00000456246 ZFP37Q9Y6Q3 630 aaPredicted RBP19.44■□□□□ 0.7
MSH6-207ENST00000456246 MYMKA6NI61 221 aa19.43■□□□□ 0.7
MSH6-207ENST00000456246 I3L4J1 428 aa19.43■□□□□ 0.7
MSH6-207ENST00000456246 ADAM12O43184 909 aa19.43■□□□□ 0.7
MSH6-207ENST00000456246 PPP1R37O75864 691 aa19.43■□□□□ 0.7
MSH6-207ENST00000456246 MYBP10242 640 aa19.43■□□□□ 0.7
MSH6-207ENST00000456246 GBP2P32456 591 aaPredicted RBP19.43■□□□□ 0.7
MSH6-207ENST00000456246 TNFSF9P41273 254 aa19.43■□□□□ 0.7
MSH6-207ENST00000456246 POSTNQ15063 836 aa19.43■□□□□ 0.7
MSH6-207ENST00000456246 ENOX2Q16206 610 aaKnown RBP19.43■□□□□ 0.7
MSH6-207ENST00000456246 AXDND1Q5T1B0 1012 aaPredicted RBP19.43■□□□□ 0.7
MSH6-207ENST00000456246 ATL3Q6DD88 541 aa19.43■□□□□ 0.7
MSH6-207ENST00000456246 ZNF280DQ6N043 979 aa19.43■□□□□ 0.7
MSH6-207ENST00000456246 SLC7A14Q8TBB6 771 aa19.43■□□□□ 0.7
MSH6-207ENST00000456246 DNAJC19Q96DA6 116 aa19.43■□□□□ 0.7
MSH6-207ENST00000456246 PRRX2Q99811 253 aa19.43■□□□□ 0.7
MSH6-207ENST00000456246 OXCT2Q9BYC2 517 aaPredicted RBP19.43■□□□□ 0.7
MSH6-207ENST00000456246 ASB7Q9H672 318 aa19.43■□□□□ 0.7
MSH6-207ENST00000456246 TUBGCP4Q9UGJ1 667 aa19.43■□□□□ 0.7
MSH6-207ENST00000456246 CPSF3Q9UKF6 684 aaKnown RBP19.43■□□□□ 0.7
MSH6-207ENST00000456246 DERAQ9Y315 318 aa19.43■□□□□ 0.7
MSH6-207ENST00000456246 GTF3C3Q9Y5Q9 886 aa19.43■□□□□ 0.7
MSH6-207ENST00000456246 STYXL1Q9Y6J8 313 aa19.43■□□□□ 0.7
MSH6-207ENST00000456246 ASGR2P07307 311 aa19.42■□□□□ 0.7
MSH6-207ENST00000456246 ZSCAN22P10073 491 aaPredicted RBP19.42■□□□□ 0.7
MSH6-207ENST00000456246 IGFBP6P24592 240 aaPredicted RBP19.42■□□□□ 0.7
MSH6-207ENST00000456246 TDGQ13569 410 aa19.42■□□□□ 0.7
MSH6-207ENST00000456246 MRPL58Q14197 206 aaKnown RBP19.42■□□□□ 0.7
MSH6-207ENST00000456246 ZC2HC1CQ53FD0 456 aaPredicted RBP19.42■□□□□ 0.7
MSH6-207ENST00000456246 ADALQ6DHV7 355 aa19.42■□□□□ 0.7
MSH6-207ENST00000456246 SLC39A4Q6P5W5 647 aa19.42■□□□□ 0.7
MSH6-207ENST00000456246 BEST2Q8NFU1 509 aa19.42■□□□□ 0.7
MSH6-207ENST00000456246 ZNF461Q8TAF7 563 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms