RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 SPOCK3Q9BQ16 436 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 TLL2Q9Y6L7 1015 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 LOC102724428A0A0B4J2F2 783 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 SH3PXD2BA1X283 911 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 SLC37A4O43826 429 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 ZNF862O60290 1169 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 ADAM23O75077 832 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 FXR2P51116 673 aaKnown RBP eCLIP10.24□□□□□ -0.77
LINC01940-201ENST00000455228 ADCY7P51828 1080 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 AP3M2P53677 418 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 SIK1P57059 783 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 PPP2R2AP63151 447 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 ZNF844Q08AG5 666 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 ZNF423Q2M1K9 1284 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 VPS36Q86VN1 386 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 ZNF75CPQ92670 426 aaPredicted RBP10.24□□□□□ -0.77
LINC01940-201ENST00000455228 NUDT12Q9BQG2 462 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 UQCC2Q9BRT2 126 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 TRIM31Q9BZY9 425 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 DPH5Q9H2P9 285 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 PPP1R9AQ9ULJ8 1098 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 DYTNA2CJ06 578 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 PIK3CDO00329 1044 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 ENPP3O14638 875 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 CETN3O15182 167 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 PYGMP11217 842 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 GTF2H1P32780 548 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 RGS2P41220 211 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 NT5C2P49902 561 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 MAGOHP61326 146 aaKnown RBP10.24□□□□□ -0.77
LINC01940-201ENST00000455228 ORC2Q13416 577 aaPredicted RBP10.24□□□□□ -0.77
LINC01940-201ENST00000455228 DIXDC1Q155Q3 683 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 CDONQ4KMG0 1287 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 KCNK18Q7Z418 384 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 DNAJC9Q8WXX5 260 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 MAGOHBQ96A72 148 aaKnown RBP10.24□□□□□ -0.77
LINC01940-201ENST00000455228 ASIC4Q96FT7 647 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 ANKRD2Q9GZV1 360 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 RAB17Q9H0T7 212 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 FAM114A2Q9NRY5 505 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 AMACRQ9UHK6 382 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 UTP11Q9Y3A2 253 aaKnown RBP10.24□□□□□ -0.77
LINC01940-201ENST00000455228 SLC22A1O15245 554 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 DAPK3O43293 454 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 GBP1P32455 592 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 CACNB1Q02641 598 aaPredicted RBP10.24□□□□□ -0.77
LINC01940-201ENST00000455228 PTK2Q05397 1052 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 DHX9Q08211 1270 aaKnown RBP10.24□□□□□ -0.77
LINC01940-201ENST00000455228 KCTD19Q17RG1 926 aaPredicted RBP10.24□□□□□ -0.77
LINC01940-201ENST00000455228 SNX30Q5VWJ9 437 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 COA7Q96BR5 231 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 HAUS1Q96CS2 278 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 MTMR9Q96QG7 549 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 CTRCQ99895 268 aa10.24□□□□□ -0.77
LINC01940-201ENST00000455228 NOC2LQ9Y3T9 749 aaKnown RBP10.24□□□□□ -0.77
LINC01940-201ENST00000455228 LINC00854A0A1B0GVQ3 168 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 SPECC1L-ADORA2AF8WAN1 911 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 SNX2O60749 519 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 HOXA7P31268 230 aaPredicted RBP10.23□□□□□ -0.77
LINC01940-201ENST00000455228 NIPAL4Q0D2K0 466 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 KCNH2Q12809 1159 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 EPHA7Q15375 998 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 C10orf76Q5T2E6 689 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 TCERG1LQ5VWI1 586 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 ALKBH5Q6P6C2 394 aaKnown RBP10.23□□□□□ -0.77
LINC01940-201ENST00000455228 FHDC1Q9C0D6 1143 aaPredicted RBP10.23□□□□□ -0.77
LINC01940-201ENST00000455228 AIPL1Q9NZN9 384 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 SHANK3Q9BYB0 1731 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 RGS13O14921 159 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 SPTLC1O15269 473 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 B3GALNT1O75752 331 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 RASA1P20936 1047 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 HSD17B4P51659 736 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 CREB5Q02930 508 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 SPDYAQ5MJ70 313 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 AGBL2Q5U5Z8 902 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 KIAA1841Q6NSI8 718 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 PHLDB2Q86SQ0 1253 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 DNAAF5Q86Y56 855 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 NLRP3Q96P20 1036 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 DLEC1Q9Y238 1755 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 FRMPD2Q68DX3 1309 aaPredicted RBP10.23□□□□□ -0.77
LINC01940-201ENST00000455228 CCDC188H7C350 402 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 OLFM2O95897 454 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 ACTN1P12814 892 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 ARFIP2P53365 341 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 GSTO1P78417 241 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 DCTN2Q13561 401 aaKnown RBP10.23□□□□□ -0.77
LINC01940-201ENST00000455228 CYLC2Q14093 348 aaPredicted RBP10.23□□□□□ -0.77
LINC01940-201ENST00000455228 DCAF17Q5H9S7 520 aaPredicted RBP10.23□□□□□ -0.77
LINC01940-201ENST00000455228 WASHC2DQ5SRD0 308 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 VASH1Q7L8A9 365 aaPredicted RBP10.23□□□□□ -0.77
LINC01940-201ENST00000455228 MAP7D3Q8IWC1 876 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 BRSK2Q8IWQ3 736 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 ACTRT1Q8TDG2 376 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 CENPKQ9BS16 269 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 KRT82Q9NSB4 513 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 PCDHA12Q9UN75 941 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 SATB2Q9UPW6 733 aa10.23□□□□□ -0.77
LINC01940-201ENST00000455228 A0A1B0GUL6 1792 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms