RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 HTRA4P83105 476 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-206ENST00000454852 TFAMQ00059 246 aaKnown RBP12.15□□□□□ -0.46
TRAF4-206ENST00000454852 MYL7Q01449 175 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 KCNMA1Q12791 1236 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 TUSC3Q13454 348 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 FKBP15Q5T1M5 1219 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 DPY19L2P1Q6NXN4 242 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 GBP6Q6ZN66 633 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 OTOP2Q7RTS6 562 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 CREBRFQ8IUR6 639 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 C1orf127Q8N9H9 656 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 FBXL13Q8NEE6 735 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 BEST2Q8NFU1 509 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 URGCPQ8TCY9 931 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 HELQQ8TDG4 1101 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 TAF4BQ92750 862 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 FAM212AQ96EL1 285 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 UROC1Q96N76 676 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 MTMR12Q9C0I1 747 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 PLCB1Q9NQ66 1216 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 TBC1D13Q9NVG8 400 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 DPP3Q9NY33 737 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 KLK14Q9P0G3 267 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 SIX4Q9UIU6 781 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 FBXL5Q9UKA1 691 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 PLAGL2Q9UPG8 496 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 SIK3Q9Y2K2 1263 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 TDRD15B5MCY1 1934 aaKnown RBP12.15□□□□□ -0.46
TRAF4-206ENST00000454852 CARNS1A5YM72 827 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 TEX33O43247 280 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 GJB5O95377 273 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 VNN1O95497 513 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 FGFR1P11362 822 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 CDC25BP30305 580 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 ATICP31939 592 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 BMP8BP34820 402 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 ZNF75DP51815 510 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 AFF1P51825 1210 aaKnown RBP12.14□□□□□ -0.47
TRAF4-206ENST00000454852 UBXN1Q04323 297 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 SOX4Q06945 474 aaPredicted RBP12.14□□□□□ -0.47
TRAF4-206ENST00000454852 EXOC3L4Q17RC7 722 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 FIGNQ5HY92 759 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 GLRA4Q5JXX5 417 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 CMTR2Q8IYT2 770 aaKnown RBP12.14□□□□□ -0.47
TRAF4-206ENST00000454852 ABI1Q8IZP0 508 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 LRRC43Q8N309 656 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 LRRC52Q8N7C0 313 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 RNF169Q8NCN4 708 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 EHBP1Q8NDI1 1231 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 TAS1R2Q8TE23 839 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 IQCDQ96DY2 449 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 DDX27Q96GQ7 796 aaKnown RBP12.14□□□□□ -0.47
TRAF4-206ENST00000454852 TRIM5Q9C035 493 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 XYLT2Q9H1B5 865 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 FAM124BQ9H5Z6 455 aaPredicted RBP12.14□□□□□ -0.47
TRAF4-206ENST00000454852 RAB20Q9NX57 234 aa12.14□□□□□ -0.47
TRAF4-206ENST00000454852 CXXC1Q9P0U4 656 aaPredicted RBP12.14□□□□□ -0.47
TRAF4-206ENST00000454852 TMEM189-UBE2V1I3L0A0 370 aa12.13□□□□□ -0.47
TRAF4-206ENST00000454852 ASS1P00966 412 aaKnown RBP12.13□□□□□ -0.47
TRAF4-206ENST00000454852 HLA-DRAP01903 254 aa12.13□□□□□ -0.47
TRAF4-206ENST00000454852 RFX1P22670 979 aa12.13□□□□□ -0.47
TRAF4-206ENST00000454852 PON1P27169 355 aa12.13□□□□□ -0.47
TRAF4-206ENST00000454852 PNPLA4P41247 253 aa12.13□□□□□ -0.47
TRAF4-206ENST00000454852 RBP5P82980 135 aa12.13□□□□□ -0.47
TRAF4-206ENST00000454852 NCOA4Q13772 614 aa12.13□□□□□ -0.47
TRAF4-206ENST00000454852 SGSM1Q2NKQ1 1148 aa12.13□□□□□ -0.47
TRAF4-206ENST00000454852 C9orf57Q5W0N0 161 aa12.13□□□□□ -0.47
TRAF4-206ENST00000454852 LMBRD2Q68DH5 695 aaPredicted RBP12.13□□□□□ -0.47
TRAF4-206ENST00000454852 TRIM65Q6PJ69 517 aa12.13□□□□□ -0.47
TRAF4-206ENST00000454852 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.13□□□□□ -0.47
TRAF4-206ENST00000454852 VSTM4Q8IW00 320 aa12.13□□□□□ -0.47
TRAF4-206ENST00000454852 COLGALT2Q8IYK4 626 aa12.13□□□□□ -0.47
TRAF4-206ENST00000454852 SP7Q8TDD2 431 aaPredicted RBP12.13□□□□□ -0.47
TRAF4-206ENST00000454852 C18orf25Q96B23 403 aaPredicted RBP12.13□□□□□ -0.47
TRAF4-206ENST00000454852 FAM81BQ96LP2 452 aa12.13□□□□□ -0.47
TRAF4-206ENST00000454852 TMEM175Q9BSA9 504 aa12.13□□□□□ -0.47
TRAF4-206ENST00000454852 TUBGCP4Q9UGJ1 667 aa12.13□□□□□ -0.47
TRAF4-206ENST00000454852 SLC4A7Q9Y6M7 1214 aa12.13□□□□□ -0.47
TRAF4-206ENST00000454852 DDHD2O94830 711 aa12.12□□□□□ -0.47
TRAF4-206ENST00000454852 CST3P01034 146 aaPredicted RBP12.12□□□□□ -0.47
TRAF4-206ENST00000454852 POMCP01189 267 aa12.12□□□□□ -0.47
TRAF4-206ENST00000454852 ITGB3P05106 788 aa12.12□□□□□ -0.47
TRAF4-206ENST00000454852 FAM163BP0C2L3 166 aa12.12□□□□□ -0.47
TRAF4-206ENST00000454852 AARSP49588 968 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRAF4-206ENST00000454852 GCNT1Q02742 428 aa12.12□□□□□ -0.47
TRAF4-206ENST00000454852 BIRC3Q13489 604 aa12.12□□□□□ -0.47
TRAF4-206ENST00000454852 SYCP1Q15431 976 aa12.12□□□□□ -0.47
TRAF4-206ENST00000454852 UPP1Q16831 310 aa12.12□□□□□ -0.47
TRAF4-206ENST00000454852 HERC6Q8IVU3 1022 aa12.12□□□□□ -0.47
TRAF4-206ENST00000454852 SEMA4DQ92854 862 aa12.12□□□□□ -0.47
TRAF4-206ENST00000454852 JAKMIP2Q96AA8 810 aa12.12□□□□□ -0.47
TRAF4-206ENST00000454852 FAM84AQ96KN4 292 aa12.12□□□□□ -0.47
TRAF4-206ENST00000454852 ZNF560Q96MR9 790 aa12.12□□□□□ -0.47
TRAF4-206ENST00000454852 EDEM3Q9BZQ6 932 aa12.12□□□□□ -0.47
TRAF4-206ENST00000454852 SIX2Q9NPC8 291 aa12.12□□□□□ -0.47
TRAF4-206ENST00000454852 GCNT4Q9P109 453 aa12.12□□□□□ -0.47
TRAF4-206ENST00000454852 INPP5FQ9Y2H2 1132 aa12.12□□□□□ -0.47
TRAF4-206ENST00000454852 TBKBP1A7MCY6 615 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 ZBBXA8MT70 800 aa12.11□□□□□ -0.47
TRAF4-206ENST00000454852 H0YGN5 161 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms