RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 ZNF699Q32M78 642 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 PAXIP1Q6ZW49 1069 aaPredicted RBP14.61□□□□□ -0.07
CLK3-203ENST00000454830 VTA1Q9NP79 307 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 EVPLQ92817 2033 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 LCTP09848 1927 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 ZBTB42B2RXF5 422 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 ZNF157P51786 506 aaPredicted RBP14.61□□□□□ -0.07
CLK3-203ENST00000454830 ITIH3Q06033 890 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 PAK2Q13177 524 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 TRADDQ15628 312 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 SPRYD7Q5W111 196 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 ACAD10Q6JQN1 1059 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 DDX42Q86XP3 938 aaKnown RBP eCLIP14.61□□□□□ -0.07
CLK3-203ENST00000454830 FAM81BQ96LP2 452 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 CELF4Q9BZC1 486 aaKnown RBP14.61□□□□□ -0.07
CLK3-203ENST00000454830 CENPHQ9H3R5 247 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 DIS3Q9Y2L1 958 aaKnown RBP14.61□□□□□ -0.07
CLK3-203ENST00000454830 STYXL1Q9Y6J8 313 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 PCNTO95613 3336 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 ACKR2O00590 384 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 PIGRP01833 764 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 SCP2P22307 547 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 ZNF792Q3KQV3 632 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 CCDC26Q8TAB7 109 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 OLIG1Q8TAK6 271 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 ADAM22Q9P0K1 906 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 GOLGA6BA6NDN3 693 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 IBSPP21815 317 aaPredicted RBP14.6□□□□□ -0.07
CLK3-203ENST00000454830 RRM1P23921 792 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 TAF1CQ15572 869 aaPredicted RBP14.6□□□□□ -0.07
CLK3-203ENST00000454830 LIN9Q5TKA1 542 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 TAPT1Q6NXT6 567 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 HES6Q96HZ4 224 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 GTF3C4Q9UKN8 822 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 FAN1Q9Y2M0 1017 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 MYO1FO00160 1098 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 MAP2K7O14733 419 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 CYP2B6P20813 491 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 TBXAS1P24557 533 aaPredicted RBP14.6□□□□□ -0.07
CLK3-203ENST00000454830 EPHB4P54760 987 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 CLEC16AQ2KHT3 1053 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 GLE1Q53GS7 698 aaKnown RBP14.6□□□□□ -0.07
CLK3-203ENST00000454830 SLFN11Q7Z7L1 901 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 CCDC50Q8IVM0 306 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 TMEM192Q8IY95 271 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 ALG3Q92685 438 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 PTENP60484 403 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 ORC1Q13415 861 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 ACVR2BQ13705 512 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 ODF2Q5BJF6 829 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 ZNF484Q5JVG2 852 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 ACTRT1Q8TDG2 376 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 LENG1Q96BZ8 264 aaPredicted RBP14.6□□□□□ -0.07
CLK3-203ENST00000454830 NAP1L3Q99457 506 aaPredicted RBP14.6□□□□□ -0.07
CLK3-203ENST00000454830 TINF2Q9BSI4 451 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 SETD4Q9NVD3 440 aa14.6□□□□□ -0.07
CLK3-203ENST00000454830 CFHP08603 1231 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 KIZQ2M2Z5 673 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 WDR72Q3MJ13 1102 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 MMS22LQ6ZRQ5 1243 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 WDR49Q8IV35 697 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 TMEM130Q8N3G9 435 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 TRIM7Q9C029 511 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 SLC5A4Q9NY91 659 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 CNTNAP2Q9UHC6 1331 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 TTI1O43156 1089 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 SNAI1O95863 264 aaPredicted RBP14.59□□□□□ -0.07
CLK3-203ENST00000454830 BRD2P25440 801 aaKnown RBP14.59□□□□□ -0.07
CLK3-203ENST00000454830 MAATS1Q7Z4T9 603 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 ANKRD23Q86SG2 305 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 MAML3Q96JK9 1138 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 APOL6Q9BWW8 343 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 CDT1Q9H211 546 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 ASAP2O43150 1006 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 ZEB2O60315 1214 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 HSF2BPO75031 334 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 C22orf31O95567 290 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 SMPD1P17405 629 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 LACTBP83111 547 aaPredicted RBP14.59□□□□□ -0.07
CLK3-203ENST00000454830 TNFAIP2Q03169 654 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 DAB2IPQ5VWQ8 1189 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 C15orf39Q6ZRI6 1047 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 CASKIN2Q8WXE0 1202 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 PTPN18Q99952 460 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 NMRK2Q9NPI5 230 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 PRMT7Q9NVM4 692 aaPredicted RBP14.59□□□□□ -0.07
CLK3-203ENST00000454830 STXBP5LQ9Y2K9 1186 aa14.59□□□□□ -0.07
CLK3-203ENST00000454830 MAGEB2O15479 319 aa14.58□□□□□ -0.07
CLK3-203ENST00000454830 PPFIA4O75335 1185 aa14.58□□□□□ -0.07
CLK3-203ENST00000454830 GJB6O95452 261 aa14.58□□□□□ -0.07
CLK3-203ENST00000454830 RAP1GAPP47736 663 aa14.58□□□□□ -0.07
CLK3-203ENST00000454830 LMAN1P49257 510 aa14.58□□□□□ -0.07
CLK3-203ENST00000454830 GABPB1Q06547 395 aaPredicted RBP14.58□□□□□ -0.07
CLK3-203ENST00000454830 SURF1Q15526 300 aa14.58□□□□□ -0.07
CLK3-203ENST00000454830 HPCAL4Q9UM19 191 aa14.58□□□□□ -0.07
CLK3-203ENST00000454830 NR2E1Q9Y466 385 aa14.58□□□□□ -0.07
CLK3-203ENST00000454830 PPME1Q9Y570 386 aa14.58□□□□□ -0.07
CLK3-203ENST00000454830 ZNFX1Q9P2E3 1918 aaKnown RBP14.58□□□□□ -0.08
CLK3-203ENST00000454830 MIF4GDA9UHW6 222 aaKnown RBP14.58□□□□□ -0.08
CLK3-203ENST00000454830 GGCXP38435 758 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms