RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 LRRC34Q8IZ02 419 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 ZBED8Q8IZ13 594 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 SEMA4DQ92854 862 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 KLHL29Q96CT2 875 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 HVCN1Q96D96 273 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 GMCL1Q96IK5 515 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 JPH1Q9HDC5 661 aaPredicted RBP11.87□□□□□ -0.51
DDR1-240ENST00000454612 TBC1D22BQ9NU19 505 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 LAMB1P07942 1786 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 RARAP10276 462 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 VCAM1P19320 739 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 ITGA8P53708 1063 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 GSCP56915 257 aaPredicted RBP11.87□□□□□ -0.51
DDR1-240ENST00000454612 CAPRIN2Q6IMN6 1127 aaKnown RBP11.87□□□□□ -0.51
DDR1-240ENST00000454612 LMNTD2Q8IXW0 634 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 NSUN6Q8TEA1 469 aaKnown RBP11.87□□□□□ -0.51
DDR1-240ENST00000454612 LENG9Q96B70 501 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 SEC16BQ96JE7 1060 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 MCEEQ96PE7 176 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 PCDHB18PQ96TA0 734 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 STMN4Q9H169 189 aaPredicted RBP11.87□□□□□ -0.51
DDR1-240ENST00000454612 SLC9A2Q9UBY0 812 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 HACL1Q9UJ83 578 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 PCDHGC5Q9Y5F6 944 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 PJA2O43164 708 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 STAM2O75886 525 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 ETS1P14921 441 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 GCLCP48506 637 aaPredicted RBP11.87□□□□□ -0.51
DDR1-240ENST00000454612 DBN1Q16643 649 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 IZUMO3Q5VZ72 239 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 OR6B2Q6IFH4 312 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 KCNV1Q6PIU1 500 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 HEXIM2Q96MH2 286 aaKnown RBP11.87□□□□□ -0.51
DDR1-240ENST00000454612 SUCLA2Q9P2R7 463 aaPredicted RBP11.87□□□□□ -0.51
DDR1-240ENST00000454612 CASZ1Q86V15 1759 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 CCDC78A2IDD5 438 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 P3H1Q32P28 736 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 ERICH1Q86X53 443 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 GPD1LQ8N335 351 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 NETO2Q8NC67 525 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 CNKSR2Q8WXI2 1034 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 FAM149B1Q96BN6 582 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 TRIM4Q9C037 500 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 MIS12Q9H081 205 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 ATP6V0A4Q9HBG4 840 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 SEL1LQ9UBV2 794 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 SYNGAP1Q96PV0 1343 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 SLC16A3O15427 465 aaKnown RBP11.86□□□□□ -0.51
DDR1-240ENST00000454612 PRLRP16471 622 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 PSMA2P25787 234 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 HNRNPH3P31942 346 aaKnown RBP11.86□□□□□ -0.51
DDR1-240ENST00000454612 RAP1GAPP47736 663 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 CLK2P49760 499 aaKnown RBP11.86□□□□□ -0.51
DDR1-240ENST00000454612 SETDB1Q15047 1291 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 QPCTQ16769 361 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 LRRC23Q53EV4 343 aaPredicted RBP11.86□□□□□ -0.51
DDR1-240ENST00000454612 C15orf52Q6ZUT6 534 aaKnown RBP11.86□□□□□ -0.51
DDR1-240ENST00000454612 SYN2Q92777 582 aaPredicted RBP11.86□□□□□ -0.51
DDR1-240ENST00000454612 PDCD2LQ9BRP1 358 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 SLITRK6Q9H5Y7 841 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 CSADQ9Y600 493 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 CREB1P16220 341 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 MAPK7Q13164 816 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 GPR162Q16538 588 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 AMHR2Q16671 573 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 MIS18BP1Q6P0N0 1132 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 SLC13A5Q86YT5 568 aaPredicted RBP11.86□□□□□ -0.51
DDR1-240ENST00000454612 C1orf131Q8NDD1 294 aaKnown RBP11.86□□□□□ -0.51
DDR1-240ENST00000454612 ZNF302Q9NR11 478 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 KLHL14Q9P2G3 628 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 CCDC88AQ3V6T2 1871 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 ANKRD31Q8N7Z5 1873 aa11.86□□□□□ -0.51
DDR1-240ENST00000454612 BANF1O75531 89 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 KITP10721 976 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 CDC25CP30307 473 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 GTF2H1P32780 548 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 ARSEP51690 589 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 CDH8P55286 799 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 NLRP11P59045 1033 aaKnown RBP11.85□□□□□ -0.51
DDR1-240ENST00000454612 ACTR2P61160 394 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 C1orf228Q6PIY5 440 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 EGFL6Q8IUX8 553 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 UBA3Q8TBC4 463 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 CHMP6Q96FZ7 201 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 TSC22D3Q99576 134 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 ZSWIM1Q9BR11 485 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 IDI2Q9BXS1 227 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 USH1CQ9Y6N9 552 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 TMEM120BA0PK00 339 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 GGPS1O95749 300 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 COILP38432 576 aaPredicted RBP11.85□□□□□ -0.51
DDR1-240ENST00000454612 SEMA3FQ13275 785 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 GJC2Q5T442 439 aaPredicted RBP11.85□□□□□ -0.51
DDR1-240ENST00000454612 ZNF354CQ86Y25 554 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 CEP120Q8N960 986 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 KCTD6Q8NC69 237 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 CFAP36Q96G28 342 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 TMBIM4Q9HC24 238 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 A0A0G2JND7 137 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms