RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 TOPORSQ9NS56 1045 aaPredicted RBP5.39□□□□□ -1.55
RIF1-207ENST00000454583 CALCOCO1Q9P1Z2 691 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 SALL4Q9UJQ4 1053 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 RAB21Q9UL25 225 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 TRIM17Q9Y577 477 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 ENPP3O14638 875 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 RAD21O60216 631 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 SMC2O95347 1197 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 C1RP00736 705 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 CFHP08603 1231 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 ASIC1P78348 528 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 GCNT1Q02742 428 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 ODR4Q5SWX8 454 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 PAPD7Q5XG87 772 aaKnown RBP5.39□□□□□ -1.55
RIF1-207ENST00000454583 SLFN11Q7Z7L1 901 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 SCML4Q8N228 414 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 SPATA18Q8TC71 538 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 CD101Q93033 1021 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 TARS2Q9BW92 718 aaKnown RBP5.39□□□□□ -1.55
RIF1-207ENST00000454583 NDST4Q9H3R1 872 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 TMEM8AQ9HCN3 771 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 CSNK1G1Q9HCP0 422 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 ZHX1Q9UKY1 873 aaPredicted RBP5.39□□□□□ -1.55
RIF1-207ENST00000454583 ZNF215Q9UL58 517 aaPredicted RBP5.39□□□□□ -1.55
RIF1-207ENST00000454583 PPP2R2CQ9Y2T4 447 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 TICRRQ7Z2Z1 1910 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 ARHGEF35A5YM69 484 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 F8VZ95 297 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 OGTO15294 1046 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 NFICP08651 508 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 UBASH3AP57075 661 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 TRIM60Q495X7 471 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 TPRNQ4KMQ1 711 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 TRNP1Q6NT89 227 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 SLC27A1Q6PCB7 646 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 ECHDC2Q86YB7 292 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 GPR65Q8IYL9 337 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 EHBP1Q8NDI1 1231 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 HERVK_113Q902F9 699 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 CPB2Q96IY4 423 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 POP1Q99575 1024 aaKnown RBP5.39□□□□□ -1.55
RIF1-207ENST00000454583 GDF15Q99988 308 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 TUBGCP2Q9BSJ2 902 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 GBP3Q9H0R5 595 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 NXF3Q9H4D5 531 aaKnown RBP5.39□□□□□ -1.55
RIF1-207ENST00000454583 CHST7Q9NS84 486 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 TMEM59LQ9UK28 342 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 NUB1Q9Y5A7 615 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 PAXBP1Q9Y5B6 917 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 IVNS1ABPQ9Y6Y0 642 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 DOCK8Q8NF50 2099 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.38□□□□□ -1.55
RIF1-207ENST00000454583 LACTBL1A8MY62 500 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 TACC1O75410 805 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 DDHD2O94830 711 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 GNA14O95837 355 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 PRKCBP05771 671 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 MARK3P27448 753 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 ZNF76P36508 570 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 ZNF252P-AS1Q0IIN9 211 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 TAZQ16635 292 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 PTPN21Q16825 1174 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 IQCEQ6IPM2 695 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 SV2AQ7L0J3 742 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 TRAPPC11Q7Z392 1133 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 PALB2Q86YC2 1186 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 SPC24Q8NBT2 197 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 MSANTD4Q8NCY6 345 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 PTCD2Q8WV60 388 aaKnown RBP5.38□□□□□ -1.55
RIF1-207ENST00000454583 NT5C3BQ969T7 300 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 P2RY11Q96G91 374 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 TWNKQ96RR1 684 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 PCDHB18PQ96TA0 734 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 SRRTQ9BXP5 876 aaKnown RBP5.38□□□□□ -1.55
RIF1-207ENST00000454583 ASB7Q9H672 318 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 KMT5AQ9NQR1 393 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 PADI3Q9ULW8 664 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 PCDHGC3Q9UN70 934 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 ST3GAL5Q9UNP4 418 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 SOWAHDA6NJG2 315 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 IGLV3-25P01717 112 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 SLC9A1P19634 815 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 KCNH2Q12809 1159 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 CCDC142Q17RM4 750 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 DCAF4L1Q3SXM0 396 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 COL13A1Q5TAT6 717 aaPredicted RBP5.38□□□□□ -1.55
RIF1-207ENST00000454583 ATF7IP2Q5U623 682 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 ISM2Q6H9L7 571 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 PDXDC1Q6P996 788 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 FAM178BQ8IXR5 827 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 RSPH1Q8WYR4 309 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 PAAF1Q9BRP4 392 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 LRRC3Q9BY71 257 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 TRIM5Q9C035 493 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 ISCUQ9H1K1 167 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 EXOC1Q9NV70 894 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 PCDH10Q9P2E7 1040 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 DOCK6Q96HP0 2047 aa5.38□□□□□ -1.55
RIF1-207ENST00000454583 BICDL2A1A5D9 508 aa5.37□□□□□ -1.55
RIF1-207ENST00000454583 F8W810 466 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms