RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 CDV3Q9UKY7 258 aaKnown RBP6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ATG2BQ96BY7 2078 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ZMYM2Q9UBW7 1377 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SLC38A8A6NNN8 435 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PODXLO00592 558 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SPTLC1O15269 473 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SOAT2O75908 522 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 VNN2O95498 520 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 MYL4P12829 197 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 NAMPTP43490 491 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SATB1Q01826 763 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 RAD51AP2Q09MP3 1159 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SPEM2Q0P670 501 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 RAB33AQ14088 237 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PCBP1Q15365 356 aaKnown RBP eCLIP6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ZNF174Q15697 407 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CCDC6Q16204 474 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 UPP1Q16831 310 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PRSS36Q5K4E3 855 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CYP26C1Q6V0L0 522 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TAS1R3Q7RTX0 852 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 EXOC8Q8IYI6 725 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 MCPH1Q8NEM0 835 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 HDAC7Q8WUI4 952 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ATRIPQ8WXE1 791 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 NXPE3Q969Y0 559 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SHDQ96IW2 340 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ZFYVE19Q96K21 471 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PRIMPOLQ96LW4 560 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ADPGKQ9BRR6 497 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 RUSC1Q9BVN2 902 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TM6SF1Q9BZW5 370 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 EPC1Q9H2F5 836 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 BHMT2Q9H2M3 363 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SLITRK6Q9H5Y7 841 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CYP4F11Q9HBI6 524 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PCDHGA2Q9Y5H1 932 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TIMM13Q9Y5L4 95 aaPredicted RBP6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 INSL5Q9Y5Q6 135 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PIAS3Q9Y6X2 628 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SPAG17Q6Q759 2223 aa6.59□□□□□ -1.35
HLA-DPA3-207ENST00000454398 RALGAPA1Q6GYQ0 2036 aa6.59□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SPEGQ15772 3267 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 FAM208BQ5VWN6 2430 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SMIM28A0A1B0GU29 152 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CCDC169A6NNP5 214 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ACKR2O00590 384 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PPEF2O14830 753 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 GDF9O60383 454 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 MOSPD3O75425 235 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 LRG1P02750 347 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 OR52Z1P0C646 297 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CDC25AP30304 524 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 GDI1P31150 447 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 HOXA9P31269 272 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CCT6AP40227 531 aaKnown RBP6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ATXN1P54253 815 aaKnown RBP6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PEX3P56589 373 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PFKPQ01813 784 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CACNB1Q02641 598 aaPredicted RBP6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PRKCQQ04759 706 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 POU5F1BQ06416 359 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TWF1Q12792 350 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 GAS6Q14393 721 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TEAD2Q15562 447 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ZRSR1Q15695 479 aaKnown RBP6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 FAM187BQ17R55 369 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 DCAF4L1Q3SXM0 396 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ZBTB41Q5SVQ8 909 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 VITQ6UXI7 678 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PDZD4Q76G19 769 aaPredicted RBP6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 KCNK18Q7Z418 384 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CCDC83Q8IWF9 413 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 DAW1Q8N136 415 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ZBTB44Q8NCP5 570 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 STKLD1Q8NE28 680 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 NELL1Q92832 810 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 NAP1L4Q99733 375 aaKnown RBP6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TARS2Q9BW92 718 aaKnown RBP6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SMG9Q9H0W8 520 aaKnown RBP6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 C2orf40Q9H1Z8 148 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CRISPLD1Q9H336 500 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SEMA4AQ9H3S1 761 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SMOC1Q9H4F8 434 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 BRD9Q9H8M2 597 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 POLR3BQ9NW08 1133 aaPredicted RBP6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ZSCAN32Q9NX65 697 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CEP72Q9P209 647 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 FBXL5Q9UKA1 691 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 FBXO4Q9UKT5 387 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 YIPF1Q9Y548 306 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ZZEF1O43149 2961 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 MYH11P35749 1972 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 WDFY3Q8IZQ1 3526 aa6.58□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ATRXP46100 2492 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PHLPP2Q6ZVD8 1323 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CHURC1-FNTBB4DL54 471 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 E9PMD0 336 aa6.57□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TMEM189-UBE2V1I3L0A0 370 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms