RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 TCF12Q99081 682 aa6.17□□□□□ -1.42
SBDSP1-204ENST00000453858 VN1R3Q9BXE9 311 aa6.17□□□□□ -1.42
SBDSP1-204ENST00000453858 ADAMTS10Q9H324 1103 aa6.17□□□□□ -1.42
SBDSP1-204ENST00000453858 SLC32A1Q9H598 525 aa6.17□□□□□ -1.42
SBDSP1-204ENST00000453858 LATS2Q9NRM7 1088 aa6.17□□□□□ -1.42
SBDSP1-204ENST00000453858 HEBP1Q9NRV9 189 aa6.17□□□□□ -1.42
SBDSP1-204ENST00000453858 CLIP2Q9UDT6 1046 aa6.17□□□□□ -1.42
SBDSP1-204ENST00000453858 MKL2Q9ULH7 1088 aa6.17□□□□□ -1.42
SBDSP1-204ENST00000453858 SYNPO2Q9UMS6 1093 aa6.17□□□□□ -1.42
SBDSP1-204ENST00000453858 PTPRBP23467 1997 aa6.17□□□□□ -1.42
SBDSP1-204ENST00000453858 TSC2P49815 1807 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 CCDC163A0A0D9SF12 145 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 SLC28A2O43868 658 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 RFPL2O75678 378 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 RPP40O75818 363 aaKnown RBP6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 CNPP09543 421 aaKnown RBP6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 FGFR1P11362 822 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 GNAT1P11488 350 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 ITPKAP23677 461 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 CALML3P27482 149 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 RDXP35241 583 aaKnown RBP6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 POLGP54098 1239 aaPredicted RBP6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 IRX4P78413 519 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 GIT2Q14161 759 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 CELF3Q5SZQ8 465 aaKnown RBP6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 TMED8Q6PL24 325 aaPredicted RBP6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 NXPE4Q6UWF7 544 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 GPR155Q7Z3F1 870 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 WFDC8Q8IUA0 241 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 CHURC1Q8WUH1 139 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 SDR42E1Q8WUS8 393 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 FCRL3Q96P31 734 aaPredicted RBP6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 RGS18Q9NS28 235 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 NOP53Q9NZM5 478 aaKnown RBP6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 CCPG1Q9ULG6 757 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 PPM1HQ9ULR3 514 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 PPME1Q9Y570 386 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 PAXBP1Q9Y5B6 917 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 CDY2AQ9Y6F7 541 aa6.16□□□□□ -1.42
SBDSP1-204ENST00000453858 A0A096LPE4 126 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 A0A1W2PPZ6 126 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 PTPDC1A2A3K4 754 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 MBLAC1A4D2B0 266 aaPredicted RBP6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 TRABD2BA6NFA1 517 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 PATE3B3GLJ2 98 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 GNB5O14775 395 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 AKAP3O75969 853 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 STAT2P52630 851 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 UAP1L1Q3KQV9 507 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 MARCH8Q5T0T0 291 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 GORABQ5T7V8 394 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 SLFN13Q68D06 897 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 HIST2H2BCQ6DN03 193 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 TAF2Q6P1X5 1199 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 PDXDC1Q6P996 788 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 ZNF574Q6ZN55 896 aaPredicted RBP6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 RNF207Q6ZRF8 634 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 FAM160B2Q86V87 743 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 ZNF280BQ86YH2 543 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 IL22RA1Q8N6P7 574 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 PNPLA1Q8N8W4 532 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 PLA2G2FQ9BZM2 168 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 TMEM117Q9H0C3 514 aa6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 NDRG2Q9UN36 371 aaKnown RBP6.15□□□□□ -1.42
SBDSP1-204ENST00000453858 PRRC2CQ9Y520 2896 aaKnown RBP6.15□□□□□ -1.43
SBDSP1-204ENST00000453858 NUP205Q92621 2012 aa6.15□□□□□ -1.43
SBDSP1-204ENST00000453858 MAP1AP78559 2803 aaPredicted RBP6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 CCDC194A0A1B0GVG4 234 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 NT5C1B-RDH14C9J2C7 533 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 MAN2B1O00754 1011 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 INPPL1O15357 1258 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 PRKAB2O43741 272 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 LGALS2P05162 132 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 NID1P14543 1247 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 ACPPP15309 386 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 ADSSP30520 456 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 ZNF76P36508 570 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 EIF2S3P41091 472 aaKnown RBP6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 ARL4DP49703 201 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 LY6DQ14210 128 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 DTHD1Q6ZMT9 781 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 FAM43BQ6ZT52 329 aaPredicted RBP6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 SLC24A5Q71RS6 500 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 TMPRSS7Q7RTY8 843 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 DDX53Q86TM3 631 aaKnown RBP6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 ASAP3Q8TDY4 903 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 BCL7CQ8WUZ0 217 aaPredicted RBP6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 DNAJB3Q8WWF6 145 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 SMG7Q92540 1137 aaKnown RBP6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 SPATA33Q96N06 139 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 CRNKL1Q9BZJ0 848 aaKnown RBP6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 NT5C3AQ9H0P0 336 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 RANBP17Q9H2T7 1088 aaKnown RBP6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 ZNF768Q9H5H4 540 aaKnown RBP6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 ABCB6Q9NP58 842 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 MAN1C1Q9NR34 630 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 MTMR4Q9NYA4 1195 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 CDH7Q9ULB5 785 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 SOX13Q9UN79 622 aa6.14□□□□□ -1.43
SBDSP1-204ENST00000453858 TRIM33Q9UPN9 1127 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms