RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 THEGQ9P2T0 379 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 R3HCC1Q9Y3T6 440 aaKnown RBP9.63□□□□□ -0.87
COL8A1-203ENST00000452013 PCDHA5Q9Y5H7 936 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 MICAL3Q7RTP6 2002 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.62□□□□□ -0.87
COL8A1-203ENST00000452013 ARHGEF37A1IGU5 675 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 HIDE1A8MVS5 230 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 C2CD2LO14523 706 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 MEFVO15553 781 aaPredicted RBP9.62□□□□□ -0.87
COL8A1-203ENST00000452013 LILRB3O75022 631 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 KIF4AO95239 1232 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 C1RP00736 705 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 RPL13P26373 211 aaKnown RBP9.62□□□□□ -0.87
COL8A1-203ENST00000452013 LRPAP1P30533 357 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 PPP1R2P41236 205 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 CYP2J2P51589 502 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 DSG1Q02413 1049 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 SOX4Q06945 474 aaPredicted RBP9.62□□□□□ -0.87
COL8A1-203ENST00000452013 STIM1Q13586 685 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 PTPN14Q15678 1187 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 CTC1Q2NKJ3 1217 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 PUS10Q3MIT2 529 aaKnown RBP9.62□□□□□ -0.87
COL8A1-203ENST00000452013 ELMSAN1Q6PJG2 1045 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.62□□□□□ -0.87
COL8A1-203ENST00000452013 ADGRD2Q7Z7M1 963 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 CEP57Q86XR8 500 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 SLC9A9Q8IVB4 645 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.62□□□□□ -0.87
COL8A1-203ENST00000452013 RNF168Q8IYW5 571 aaPredicted RBP9.62□□□□□ -0.87
COL8A1-203ENST00000452013 RDH13Q8NBN7 331 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 SPATA20Q8TB22 786 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 HASPINQ8TF76 798 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 TMEM174Q8WUU8 243 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 RIN2Q8WYP3 895 aaPredicted RBP9.62□□□□□ -0.87
COL8A1-203ENST00000452013 FBXL18Q96ME1 805 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 KLHL5Q96PQ7 755 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 FNBP1Q96RU3 617 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 VN1R3Q9BXE9 311 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 UBE2ZQ9H832 354 aaPredicted RBP9.62□□□□□ -0.87
COL8A1-203ENST00000452013 GOLGA2P5Q9HBQ8 144 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 DPP3Q9NY33 737 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 FNIP2Q9P278 1114 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 DPP7Q9UHL4 492 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 TRAF3IP3Q9Y228 551 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 PCDHGC5Q9Y5F6 944 aa9.62□□□□□ -0.87
COL8A1-203ENST00000452013 ARID2Q68CP9 1835 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 F8W810 466 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 H7C4K7 107 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 SYN3O14994 580 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 CLASP2O75122 1294 aaKnown RBP9.61□□□□□ -0.87
COL8A1-203ENST00000452013 ADH1AP07327 375 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 FGFR3P22607 806 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 NDUFV1P49821 464 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 TFAMQ00059 246 aaKnown RBP9.61□□□□□ -0.87
COL8A1-203ENST00000452013 COL19A1Q14993 1142 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 SNRNP35Q16560 246 aaKnown RBP9.61□□□□□ -0.87
COL8A1-203ENST00000452013 NFIL3Q16649 462 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 DUOXA2Q1HG44 320 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 COBLL1Q53SF7 1204 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 CD300LGQ6UXG3 332 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 DSTYKQ6XUX3 929 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 TMEM184AQ6ZMB5 413 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 ANKS3Q6ZW76 656 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 CBWD2Q8IUF1 395 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 APPL2Q8NEU8 664 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 AUTS2Q8WXX7 1259 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 CASP10Q92851 521 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 ANKRD36BP1Q96IX9 119 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 TSG101Q99816 390 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 KCTD10Q9H3F6 313 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 DMAC2Q9NW81 257 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 CACNG4Q9UBN1 327 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 TUBGCP4Q9UGJ1 667 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 MAPK8IP1Q9UQF2 711 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 FAM50BQ9Y247 325 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 FRMD4BQ9Y2L6 1034 aa9.61□□□□□ -0.87
COL8A1-203ENST00000452013 ANO9A1A5B4 782 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 PIRO00625 290 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 TNNC2P02585 160 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 NR3C1P04150 777 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 NFICP08651 508 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 CNPP09543 421 aaKnown RBP9.6□□□□□ -0.87
COL8A1-203ENST00000452013 TMEM191BP0C7N4 346 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 HOXB8P17481 243 aaPredicted RBP9.6□□□□□ -0.87
COL8A1-203ENST00000452013 TNNI1P19237 187 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 KCNA5P22460 613 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 GTF2F1P35269 517 aaKnown RBP eCLIP9.6□□□□□ -0.87
COL8A1-203ENST00000452013 PNPLA4P41247 253 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 BRCC3P46736 316 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 AP3M2P53677 418 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 RBP5P82980 135 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 ADAM9Q13443 819 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 PSMD6Q15008 389 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 KLHL40Q2TBA0 621 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 LEXMQ3ZCV2 418 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 C9orf57Q5W0N0 161 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 USP37Q86T82 979 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 WDR49Q8IV35 697 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 CSGALNACT2Q8N6G5 542 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 ZSWIM2Q8NEG5 633 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms