RNA–Protein interactions for RNA: ENST00000451871.1

KARSP1-201, Transcript of lysyl-tRNA synthetase pseudogene 1, humanhuman

BASIC

Gene KARSP1, Length 1,752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP1-201ENST00000451871 ITGB1P05556 798 aa6.95□□□□□ -1.3
KARSP1-201ENST00000451871 SLFN14P0C7P3 912 aa6.95□□□□□ -1.3
KARSP1-201ENST00000451871 SP100P23497 879 aaPredicted RBP6.95□□□□□ -1.3
KARSP1-201ENST00000451871 CALML3P27482 149 aa6.95□□□□□ -1.3
KARSP1-201ENST00000451871 NTF4P34130 210 aa6.95□□□□□ -1.3
KARSP1-201ENST00000451871 ARHGAP1Q07960 439 aa6.95□□□□□ -1.3
KARSP1-201ENST00000451871 SBK1Q52WX2 424 aa6.95□□□□□ -1.3
KARSP1-201ENST00000451871 SHISA2Q6UWI4 295 aa6.95□□□□□ -1.3
KARSP1-201ENST00000451871 SLC30A10Q6XR72 485 aa6.95□□□□□ -1.3
KARSP1-201ENST00000451871 KCTD1Q719H9 257 aa6.95□□□□□ -1.3
KARSP1-201ENST00000451871 AACSQ86V21 672 aa6.95□□□□□ -1.3
KARSP1-201ENST00000451871 SERINC5Q86VE9 423 aa6.95□□□□□ -1.3
KARSP1-201ENST00000451871 DNERQ8NFT8 737 aa6.95□□□□□ -1.3
KARSP1-201ENST00000451871 RIN3Q8TB24 985 aa6.95□□□□□ -1.3
KARSP1-201ENST00000451871 SLC7A14Q8TBB6 771 aa6.95□□□□□ -1.3
KARSP1-201ENST00000451871 ATP8B4Q8TF62 1192 aa6.95□□□□□ -1.3
KARSP1-201ENST00000451871 DDX1Q92499 740 aaKnown RBP6.95□□□□□ -1.3
KARSP1-201ENST00000451871 ZNF689Q96CS4 500 aaPredicted RBP6.95□□□□□ -1.3
KARSP1-201ENST00000451871 MPHOSPH6Q99547 160 aaKnown RBP6.95□□□□□ -1.3
KARSP1-201ENST00000451871 SMOC2Q9H3U7 446 aa6.95□□□□□ -1.3
KARSP1-201ENST00000451871 RC3H2Q9HBD1 1191 aaKnown RBP6.95□□□□□ -1.3
KARSP1-201ENST00000451871 ZIM2Q9NZV7 527 aa6.95□□□□□ -1.3
KARSP1-201ENST00000451871 ADAM30Q9UKF2 790 aa6.95□□□□□ -1.3
KARSP1-201ENST00000451871 PER2O15055 1255 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 CBFA2T2O43439 604 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 PI15O43692 258 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 UBOX5O94941 541 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 F2P00734 622 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 CHGBP05060 677 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 ARP10275 920 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 DRD2P14416 443 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 PMS1P54277 932 aaKnown RBP6.94□□□□□ -1.3
KARSP1-201ENST00000451871 RBM10P98175 930 aaKnown RBP6.94□□□□□ -1.3
KARSP1-201ENST00000451871 ID3Q02535 119 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 BIRC2Q13490 618 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 BTG3Q14201 252 aaPredicted RBP6.94□□□□□ -1.3
KARSP1-201ENST00000451871 ZNF460Q14592 562 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 GRIK4Q16099 956 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 HP1BP3Q5SSJ5 553 aaPredicted RBP6.94□□□□□ -1.3
KARSP1-201ENST00000451871 RCSD1Q6JBY9 416 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 PKN3Q6P5Z2 889 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 RNF207Q6ZRF8 634 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.94□□□□□ -1.3
KARSP1-201ENST00000451871 FGD2Q7Z6J4 655 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 ZNF227Q86WZ6 799 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 SCUBE1Q8IWY4 988 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 CCDC105Q8IYK2 499 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 DCLK2Q8N568 766 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 CYP2W1Q8TAV3 490 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 POF1BQ8WVV4 589 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 MTMR8Q96EF0 704 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 NEK1Q96PY6 1258 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 RPS6KC1Q96S38 1066 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 WNT10AQ9GZT5 417 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 S1PR5Q9H228 398 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 TLE6Q9H808 572 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 CRIM1Q9NZV1 1036 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 SUCOQ9UBS9 1254 aaKnown RBP6.94□□□□□ -1.3
KARSP1-201ENST00000451871 MKL2Q9ULH7 1088 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 CEP295Q9C0D2 2601 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 NBEAQ8NFP9 2946 aa6.94□□□□□ -1.3
KARSP1-201ENST00000451871 MEGF11A6BM72 1044 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 B4DLN1 442 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 WIPF1O43516 503 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 PRDM1O75626 825 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 ZNF286BP0CG31 522 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 PABPC1P11940 636 aaKnown RBP6.93□□□□□ -1.3
KARSP1-201ENST00000451871 AOC1P19801 751 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 SDHBP21912 280 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 MRPL12P52815 198 aaKnown RBP6.93□□□□□ -1.3
KARSP1-201ENST00000451871 ATXN1P54253 815 aaKnown RBP6.93□□□□□ -1.3
KARSP1-201ENST00000451871 RPS6P62753 249 aaKnown RBP6.93□□□□□ -1.3
KARSP1-201ENST00000451871 ITKQ08881 620 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 CWF19L1Q69YN2 538 aaKnown RBP6.93□□□□□ -1.3
KARSP1-201ENST00000451871 HEATR6Q6AI08 1181 aaKnown RBP6.93□□□□□ -1.3
KARSP1-201ENST00000451871 IGF2-ASQ6U949 168 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 MCATQ8IVS2 390 aaKnown RBP6.93□□□□□ -1.3
KARSP1-201ENST00000451871 FAM9BQ8IZU0 186 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 AGGF1Q8N302 714 aaeCLIP6.93□□□□□ -1.3
KARSP1-201ENST00000451871 ZNF513Q8N8E2 541 aaPredicted RBP6.93□□□□□ -1.3
KARSP1-201ENST00000451871 DTWD2Q8NBA8 298 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 FLCNQ8NFG4 579 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 VN1R2Q8NFZ6 395 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 CLEC4DQ8WXI8 215 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 RUBCNQ92622 972 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 APBB2Q92870 758 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 FANCD2OSQ96PS1 177 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 MRPL4Q9BYD3 311 aaKnown RBP6.93□□□□□ -1.3
KARSP1-201ENST00000451871 FBRSQ9HAH7 460 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 TRIM39Q9HCM9 518 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 DISC1Q9NRI5 854 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 NDOR1Q9UHB4 597 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 SFMBT1Q9UHJ3 866 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 NR2E1Q9Y466 385 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 TNPO3Q9Y5L0 923 aaKnown RBP6.93□□□□□ -1.3
KARSP1-201ENST00000451871 CNTNAP5Q8WYK1 1306 aa6.93□□□□□ -1.3
KARSP1-201ENST00000451871 BLACEA4D250 179 aa6.92□□□□□ -1.3
KARSP1-201ENST00000451871 AKAP10O43572 662 aa6.92□□□□□ -1.3
KARSP1-201ENST00000451871 CT47B1P0C2W7 299 aaPredicted RBP6.92□□□□□ -1.3
KARSP1-201ENST00000451871 ADH5P11766 374 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms