RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 BRD1O95696 1058 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 ZSCAN22P10073 491 aaPredicted RBP10.55□□□□□ -0.72
USP54-207ENST00000451492 KCNE1P15382 129 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 NASPP49321 788 aaPredicted RBP10.55□□□□□ -0.72
USP54-207ENST00000451492 XKR4Q5GH76 650 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 PPM1LQ5SGD2 360 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 DCLRE1AQ6PJP8 1040 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 CD300LGQ6UXG3 332 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 RSPO2Q6UXX9 243 aaPredicted RBP10.55□□□□□ -0.72
USP54-207ENST00000451492 CCDC73Q6ZRK6 1079 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 MAP4K3Q8IVH8 894 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 LINC00301Q8NCQ3 95 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 SLC7A14Q8TBB6 771 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 DHX58Q96C10 678 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 ACSF2Q96CM8 615 aaPredicted RBP10.55□□□□□ -0.72
USP54-207ENST00000451492 FIZ1Q96SL8 496 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 MRPL44Q9H9J2 332 aaKnown RBP10.55□□□□□ -0.72
USP54-207ENST00000451492 RPF1Q9H9Y2 349 aaKnown RBP10.55□□□□□ -0.72
USP54-207ENST00000451492 LIMD1Q9UGP4 676 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 DPP7Q9UHL4 492 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 FBXW11Q9UKB1 542 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 SCN1AP35498 2009 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 TECTAO75443 2155 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 LACTBL1A8MY62 500 aa10.54□□□□□ -0.72
USP54-207ENST00000451492 OGTO15294 1046 aa10.54□□□□□ -0.72
USP54-207ENST00000451492 C8AP07357 584 aa10.54□□□□□ -0.72
USP54-207ENST00000451492 CLTAP09496 248 aa10.54□□□□□ -0.72
USP54-207ENST00000451492 FGFR3P22607 806 aa10.54□□□□□ -0.72
USP54-207ENST00000451492 ACOT2P49753 483 aa10.54□□□□□ -0.72
USP54-207ENST00000451492 NTHL1P78549 312 aa10.54□□□□□ -0.72
USP54-207ENST00000451492 MTMR3Q13615 1198 aa10.54□□□□□ -0.72
USP54-207ENST00000451492 ENOX2Q16206 610 aaKnown RBP10.54□□□□□ -0.72
USP54-207ENST00000451492 VARS2Q5ST30 1063 aaKnown RBP10.54□□□□□ -0.72
USP54-207ENST00000451492 ADALQ6DHV7 355 aa10.54□□□□□ -0.72
USP54-207ENST00000451492 JADE1Q6IE81 842 aa10.54□□□□□ -0.72
USP54-207ENST00000451492 PDXDC1Q6P996 788 aa10.54□□□□□ -0.72
USP54-207ENST00000451492 C15orf39Q6ZRI6 1047 aa10.54□□□□□ -0.72
USP54-207ENST00000451492 TRIM67Q6ZTA4 783 aa10.54□□□□□ -0.72
USP54-207ENST00000451492 GRASPQ7Z6J2 395 aaPredicted RBP10.54□□□□□ -0.72
USP54-207ENST00000451492 PBXIP1Q96AQ6 731 aa10.54□□□□□ -0.72
USP54-207ENST00000451492 ZNF707Q96C28 371 aaPredicted RBP10.54□□□□□ -0.72
USP54-207ENST00000451492 DNAJC19Q96DA6 116 aa10.54□□□□□ -0.72
USP54-207ENST00000451492 FGFBP2Q9BYJ0 223 aa10.54□□□□□ -0.72
USP54-207ENST00000451492 PLEKHA4Q9H4M7 779 aa10.54□□□□□ -0.72
USP54-207ENST00000451492 MTRRQ9UBK8 725 aa10.54□□□□□ -0.72
USP54-207ENST00000451492 NOTCH4Q99466 2003 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 TTC26A0AVF1 554 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 PPEF2O14830 753 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 FAM189A1O60320 539 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 N4BP1O75113 896 aaKnown RBP10.53□□□□□ -0.72
USP54-207ENST00000451492 ZMYND10O75800 440 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 PDGFBP01127 241 aaPredicted RBP10.53□□□□□ -0.72
USP54-207ENST00000451492 PIGRP01833 764 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 NFICP08651 508 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 CASP5P51878 434 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 GTF2BQ00403 316 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 SIGLEC14Q08ET2 396 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 KCNA1Q09470 495 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 AXDND1Q5T1B0 1012 aaPredicted RBP10.53□□□□□ -0.72
USP54-207ENST00000451492 LILRA6Q6PI73 481 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 ANKS3Q6ZW76 656 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 OTOP3Q7RTS5 596 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 PLCD3Q8N3E9 789 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 POMGNT1Q8WZA1 660 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 HPS3Q969F9 1004 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 SAAL1Q96ER3 474 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 PRKD2Q9BZL6 878 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 PANK4Q9NVE7 773 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 HCFC1R1Q9NWW0 138 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 ZDHHC7Q9NXF8 308 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 AGO2Q9UKV8 859 aaKnown RBP10.53□□□□□ -0.72
USP54-207ENST00000451492 SORCS3Q9UPU3 1222 aa10.53□□□□□ -0.72
USP54-207ENST00000451492 TIMM13Q9Y5L4 95 aaPredicted RBP10.53□□□□□ -0.72
USP54-207ENST00000451492 A0A0B4J269 797 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 WDR27A2RRH5 827 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 XPOTO43592 962 aaKnown RBP10.52□□□□□ -0.73
USP54-207ENST00000451492 CUTAO60888 179 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 PPP6R2O75170 966 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 YEATS4O95619 227 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 CPB1P15086 417 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 GAP43P17677 238 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 CASP1P29466 404 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 ME1P48163 572 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 CDR1P51861 262 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 ASIC1P78348 528 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 ROR1Q01973 937 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 DNM1Q05193 864 aaKnown RBP10.52□□□□□ -0.73
USP54-207ENST00000451492 TMEM132DQ14C87 1099 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 CTXN3Q4LDR2 81 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 L1TD1Q5T7N2 865 aaKnown RBP10.52□□□□□ -0.73
USP54-207ENST00000451492 SHC4Q6S5L8 630 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 DSTYKQ6XUX3 929 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 ZNF720Q7Z2F6 126 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 SUGP1Q8IWZ8 645 aaKnown RBP10.52□□□□□ -0.73
USP54-207ENST00000451492 ZDHHC14Q8IZN3 488 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 SYCP3Q8IZU3 236 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 ZSWIM2Q8NEG5 633 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 BEST2Q8NFU1 509 aa10.52□□□□□ -0.73
USP54-207ENST00000451492 CMASQ8NFW8 434 aaPredicted RBP10.52□□□□□ -0.73
USP54-207ENST00000451492 HDAC7Q8WUI4 952 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms