RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 MCM4P33991 863 aa16.89■□□□□ 0.29
LIMS1-210ENST00000449684 TNFSF9P41273 254 aa16.89■□□□□ 0.29
LIMS1-210ENST00000449684 PPM1LQ5SGD2 360 aa16.89■□□□□ 0.29
LIMS1-210ENST00000449684 ADALQ6DHV7 355 aa16.89■□□□□ 0.29
LIMS1-210ENST00000449684 LILRA6Q6PI73 481 aa16.89■□□□□ 0.29
LIMS1-210ENST00000449684 TRIM67Q6ZTA4 783 aa16.89■□□□□ 0.29
LIMS1-210ENST00000449684 ZNF720Q7Z2F6 126 aa16.89■□□□□ 0.29
LIMS1-210ENST00000449684 ZDHHC14Q8IZN3 488 aa16.89■□□□□ 0.29
LIMS1-210ENST00000449684 C3orf58Q8NDZ4 430 aa16.89■□□□□ 0.29
LIMS1-210ENST00000449684 MFSD14AQ96MC6 490 aa16.89■□□□□ 0.29
LIMS1-210ENST00000449684 HAPLN2Q9GZV7 340 aa16.89■□□□□ 0.29
LIMS1-210ENST00000449684 LIMD1Q9UGP4 676 aa16.89■□□□□ 0.29
LIMS1-210ENST00000449684 RAPGEFL1Q9UHV5 662 aa16.89■□□□□ 0.29
LIMS1-210ENST00000449684 CFAP45Q9UL16 551 aa16.89■□□□□ 0.29
LIMS1-210ENST00000449684 UBQLN1Q9UMX0 589 aaKnown RBP16.89■□□□□ 0.29
LIMS1-210ENST00000449684 POLIQ9UNA4 740 aa16.89■□□□□ 0.29
LIMS1-210ENST00000449684 PCDHB13Q9Y5F0 798 aa16.89■□□□□ 0.29
LIMS1-210ENST00000449684 CDY1Q9Y6F8 540 aa16.89■□□□□ 0.29
LIMS1-210ENST00000449684 PLXNA3P51805 1871 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 A0A0B4J269 797 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 LACTBL1A8MY62 500 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 H7C4K7 107 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 ZMYND10O75800 440 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 IGFBP6P24592 240 aaPredicted RBP16.88■□□□□ 0.29
LIMS1-210ENST00000449684 AMPD3Q01432 767 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 MTMR3Q13615 1198 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 POSTNQ15063 836 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 CD302Q8IX05 232 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 CCDC65Q8IXS2 484 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 SYCP3Q8IZU3 236 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 KCNG4Q8TDN1 519 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 POMGNT1Q8WZA1 660 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 HVCN1Q96D96 273 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 FIZ1Q96SL8 496 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 PRKD2Q9BZL6 878 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 ST6GALNAC4Q9H4F1 302 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 PANK4Q9NVE7 773 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 MTRRQ9UBK8 725 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 TUBGCP4Q9UGJ1 667 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 SORCS3Q9UPU3 1222 aa16.88■□□□□ 0.29
LIMS1-210ENST00000449684 TTC26A0AVF1 554 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 TMEM221A6NGB7 291 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 M0R296 226 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 SYN3O14994 580 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 XYLBO75191 536 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 C8AP07357 584 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 ELF1P32519 619 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 ME1P48163 572 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 ARPP19P56211 112 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 SIGLEC14Q08ET2 396 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 RAB33AQ14088 237 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 ENOX2Q16206 610 aaKnown RBP16.87■□□□□ 0.29
LIMS1-210ENST00000449684 VARS2Q5ST30 1063 aaKnown RBP16.87■□□□□ 0.29
LIMS1-210ENST00000449684 ATL3Q6DD88 541 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 APPL2Q8NEU8 664 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 BEST2Q8NFU1 509 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 FEZF2Q8TBJ5 459 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 PBXIP1Q96AQ6 731 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 DHX58Q96C10 678 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 DNAJC19Q96DA6 116 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 ACCSQ96QU6 501 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 TSPAN18Q96SJ8 248 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 WDR6Q9NNW5 1121 aaKnown RBP16.87■□□□□ 0.29
LIMS1-210ENST00000449684 FAM13BQ9NYF5 915 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 FBXW11Q9UKB1 542 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 AGO2Q9UKV8 859 aaKnown RBP16.87■□□□□ 0.29
LIMS1-210ENST00000449684 BACE2Q9Y5Z0 518 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 CLUHO75153 1309 aa16.87■□□□□ 0.29
LIMS1-210ENST00000449684 A0A087X0B3 334 aa16.86■□□□□ 0.29
LIMS1-210ENST00000449684 ANKRD63C9JTQ0 380 aa16.86■□□□□ 0.29
LIMS1-210ENST00000449684 ADAM12O43184 909 aa16.86■□□□□ 0.29
LIMS1-210ENST00000449684 ASGR2P07307 311 aa16.86■□□□□ 0.29
LIMS1-210ENST00000449684 HNRNPA1P09651 372 aaKnown RBP eCLIP16.86■□□□□ 0.29
LIMS1-210ENST00000449684 CYP3A5P20815 502 aa16.86■□□□□ 0.29
LIMS1-210ENST00000449684 ACOT2P49753 483 aa16.86■□□□□ 0.29
LIMS1-210ENST00000449684 ALCAMQ13740 583 aa16.86■□□□□ 0.29
LIMS1-210ENST00000449684 ZBTB41Q5SVQ8 909 aa16.86■□□□□ 0.29
LIMS1-210ENST00000449684 AXDND1Q5T1B0 1012 aaPredicted RBP16.86■□□□□ 0.29
LIMS1-210ENST00000449684 CD300LGQ6UXG3 332 aa16.86■□□□□ 0.29
LIMS1-210ENST00000449684 HFE2Q6ZVN8 426 aa16.86■□□□□ 0.29
LIMS1-210ENST00000449684 STXBP4Q6ZWJ1 553 aa16.86■□□□□ 0.29
LIMS1-210ENST00000449684 UBALD2Q8IYN6 164 aa16.86■□□□□ 0.29
LIMS1-210ENST00000449684 IQUBQ8NA54 791 aa16.86■□□□□ 0.29
LIMS1-210ENST00000449684 SLC7A14Q8TBB6 771 aa16.86■□□□□ 0.29
LIMS1-210ENST00000449684 SUSD3Q96L08 255 aa16.86■□□□□ 0.29
LIMS1-210ENST00000449684 RHOBTB2Q9BYZ6 727 aa16.86■□□□□ 0.29
LIMS1-210ENST00000449684 TNMDQ9H2S6 317 aa16.86■□□□□ 0.29
LIMS1-210ENST00000449684 CUEDC2Q9H467 287 aa16.86■□□□□ 0.29
LIMS1-210ENST00000449684 MTCL1Q9Y4B5 1905 aaKnown RBP16.86■□□□□ 0.29
LIMS1-210ENST00000449684 MEFVO15553 781 aaPredicted RBP16.85■□□□□ 0.29
LIMS1-210ENST00000449684 TMEM132DQ14C87 1099 aa16.85■□□□□ 0.29
LIMS1-210ENST00000449684 UVSSAQ2YD98 709 aa16.85■□□□□ 0.29
LIMS1-210ENST00000449684 CTXN3Q4LDR2 81 aa16.85■□□□□ 0.29
LIMS1-210ENST00000449684 L1TD1Q5T7N2 865 aaKnown RBP16.85■□□□□ 0.29
LIMS1-210ENST00000449684 SLC39A4Q6P5W5 647 aa16.85■□□□□ 0.29
LIMS1-210ENST00000449684 DSTYKQ6XUX3 929 aa16.85■□□□□ 0.29
LIMS1-210ENST00000449684 USP37Q86T82 979 aa16.85■□□□□ 0.29
LIMS1-210ENST00000449684 SUGP1Q8IWZ8 645 aaKnown RBP16.85■□□□□ 0.29
LIMS1-210ENST00000449684 ZNF707Q96C28 371 aaPredicted RBP16.85■□□□□ 0.29
LIMS1-210ENST00000449684 OLFML3Q9NRN5 406 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms