RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 EEF1DP3Q658K8 133 aa17.27■□□□□ 0.35
AP000253.1-201ENST00000449339 EMBQ6PCB8 327 aa17.27■□□□□ 0.35
AP000253.1-201ENST00000449339 IFNL1Q8IU54 200 aa17.27■□□□□ 0.35
AP000253.1-201ENST00000449339 DDX1Q92499 740 aaKnown RBP17.27■□□□□ 0.35
AP000253.1-201ENST00000449339 MED4Q9NPJ6 270 aa17.27■□□□□ 0.35
AP000253.1-201ENST00000449339 KRIT1O00522 736 aa17.26■□□□□ 0.35
AP000253.1-201ENST00000449339 DDX3YO15523 660 aaKnown RBP17.26■□□□□ 0.35
AP000253.1-201ENST00000449339 RAD51CO43502 376 aa17.26■□□□□ 0.35
AP000253.1-201ENST00000449339 CYP2C19P33261 490 aa17.26■□□□□ 0.35
AP000253.1-201ENST00000449339 AARSP49588 968 aaKnown RBP eCLIP17.26■□□□□ 0.35
AP000253.1-201ENST00000449339 OSTNP61366 133 aa17.26■□□□□ 0.35
AP000253.1-201ENST00000449339 FAM193AP78312 1265 aa17.26■□□□□ 0.35
AP000253.1-201ENST00000449339 TNFAIP2Q03169 654 aa17.26■□□□□ 0.35
AP000253.1-201ENST00000449339 IQSEC1Q6DN90 963 aa17.26■□□□□ 0.35
AP000253.1-201ENST00000449339 SND1Q7KZF4 910 aaKnown RBP eCLIP17.26■□□□□ 0.35
AP000253.1-201ENST00000449339 FAM212AQ96EL1 285 aa17.26■□□□□ 0.35
AP000253.1-201ENST00000449339 CGRRF1Q99675 332 aa17.26■□□□□ 0.35
AP000253.1-201ENST00000449339 FZD8Q9H461 694 aa17.26■□□□□ 0.35
AP000253.1-201ENST00000449339 IFT122Q9HBG6 1241 aa17.26■□□□□ 0.35
AP000253.1-201ENST00000449339 CHORDC1Q9UHD1 332 aaPredicted RBP17.26■□□□□ 0.35
AP000253.1-201ENST00000449339 AKT3Q9Y243 479 aa17.26■□□□□ 0.35
AP000253.1-201ENST00000449339 ALG6Q9Y672 507 aa17.26■□□□□ 0.35
AP000253.1-201ENST00000449339 A0A087WZ62 844 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 ESYT3A0FGR9 886 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 ACKR2O00590 384 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 DYNC1LI2O43237 492 aaPredicted RBP17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 CYP2B6P20813 491 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 TMEM132AQ24JP5 1023 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 ATF7IP2Q5U623 682 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 DCAF12L1Q5VU92 463 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 C11orf63Q6NUN7 778 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 MTHFD1LQ6UB35 978 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 C17orf99Q6UX52 265 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 LINC01465Q8N7H1 131 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 ZIC5Q96T25 663 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 FDXACB1Q9BRP7 624 aaPredicted RBP17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 SLC5A4Q9NY91 659 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 MGAMO43451 1857 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 ATMINO43313 823 aaPredicted RBP17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 SLC10A3P09131 477 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 CARSP49589 748 aaKnown RBP17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 MCL1Q07820 350 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 BRSK2Q8IWQ3 736 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 THNSL1Q8IYQ7 743 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 CEP120Q8N960 986 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 FAM71BQ8TC56 605 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 CARD9Q9H257 536 aa17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 TTC7AQ9ULT0 858 aaPredicted RBP17.25■□□□□ 0.35
AP000253.1-201ENST00000449339 CCDC188H7C350 402 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 OGTO15294 1046 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 FGGP02679 453 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 GYS2P54840 703 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 PPFIA1Q13136 1202 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 GRIK4Q16099 956 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 DGKDQ16760 1214 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 ZNF568Q3ZCX4 644 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 MARCH8Q5T0T0 291 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 OLFML2BQ68BL8 750 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 TSHZ1Q6ZSZ6 1077 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 IFT81Q8WYA0 676 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 APOBEC3GQ9HC16 384 aaKnown RBP17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 PTPRHQ9HD43 1115 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 VPS18Q9P253 973 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 NFU1Q9UMS0 254 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 ZSWIM8A7E2V4 1837 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 ASAP2O43150 1006 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 SART1O43290 800 aaKnown RBP17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 MTA2O94776 668 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 HOXD8P13378 290 aaPredicted RBP17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 PROZP22891 400 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 MPZL3Q6UWV2 235 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 TMEM192Q8IY95 271 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 CAVIN3Q969G5 261 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 GTF3C4Q9UKN8 822 aa17.24■□□□□ 0.35
AP000253.1-201ENST00000449339 UMODL1Q5DID0 1318 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 FAM155AB1AL88 458 aaPredicted RBP17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 MAGEB2O15479 319 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 PHACTR2O75167 634 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 CLSTN1O94985 981 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 SYF2O95926 243 aaKnown RBP17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 ITGA4P13612 1032 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 PAK2Q13177 524 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 GRM1Q13255 1194 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 ZNF771Q7L3S4 317 aaPredicted RBP17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 ALG3Q92685 438 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 ZNF653Q96CK0 615 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 RNPC3Q96LT9 517 aaKnown RBP17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 DDX47Q9H0S4 455 aaKnown RBP17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 SETD4Q9NVD3 440 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 CPSF3Q9UKF6 684 aaKnown RBP17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 FAN1Q9Y2M0 1017 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 PCDHB2Q9Y5E7 798 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 PASKQ96RG2 1323 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 MIF4GDA9UHW6 222 aaKnown RBP17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 CYP1A2P05177 515 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 ZNF865P0CJ78 1059 aaPredicted RBP17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 CTGFP29279 349 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 PHKA2P46019 1235 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 CRHR2Q13324 411 aa17.23■□□□□ 0.35
AP000253.1-201ENST00000449339 ACAD10Q6JQN1 1059 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms