RNA–Protein interactions for RNA: ENST00000448656.5

CCDC148-205, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best)

Gene CCDC148, Length 1,786 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-205ENST00000448656 TBXAS1P24557 533 aaPredicted RBP12.74□□□□□ -0.37
CCDC148-205ENST00000448656 CASQ1P31415 396 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 NOP14P78316 857 aaKnown RBP12.74□□□□□ -0.37
CCDC148-205ENST00000448656 NFX1Q12986 1120 aaKnown RBP12.74□□□□□ -0.37
CCDC148-205ENST00000448656 BMS1Q14692 1282 aaKnown RBP12.74□□□□□ -0.37
CCDC148-205ENST00000448656 TMEM132DQ14C87 1099 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 SGSM1Q2NKQ1 1148 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 SLC10A6Q3KNW5 377 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 SHC3Q92529 594 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 APOL6Q9BWW8 343 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 TRMT13Q9NUP7 481 aaKnown RBP12.74□□□□□ -0.37
CCDC148-205ENST00000448656 TFR2Q9UP52 801 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 PTPN22Q9Y2R2 807 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 RBAK-RBAKDNI3L0D1 243 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 CYP26A1O43174 497 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 ARHGAP25P42331 645 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 MYL6P60660 151 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 PTK7Q13308 1070 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 CUL2Q13617 745 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 ZNF699Q32M78 642 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 ZNF569Q5MCW4 686 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 C10orf76Q5T2E6 689 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 TWF2Q6IBS0 349 aaKnown RBP12.74□□□□□ -0.37
CCDC148-205ENST00000448656 FAM228AQ86W67 206 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 FAM71AQ8IYT1 594 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 DHX38Q92620 1227 aaKnown RBP12.74□□□□□ -0.37
CCDC148-205ENST00000448656 WNT8BQ93098 351 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 KIF12Q96FN5 646 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 IRX2Q9BZI1 471 aaPredicted RBP12.74□□□□□ -0.37
CCDC148-205ENST00000448656 TRIM10Q9UDY6 481 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 PARP2Q9UGN5 583 aa12.74□□□□□ -0.37
CCDC148-205ENST00000448656 TRIP12Q14669 1992 aaPredicted RBP12.73□□□□□ -0.37
CCDC148-205ENST00000448656 A0A1W2PQ45 241 aaPredicted RBP12.73□□□□□ -0.37
CCDC148-205ENST00000448656 A0A1W2PQY0 241 aa12.73□□□□□ -0.37
CCDC148-205ENST00000448656 GPR182O15218 404 aa12.73□□□□□ -0.37
CCDC148-205ENST00000448656 ASS1P00966 412 aaKnown RBP12.73□□□□□ -0.37
CCDC148-205ENST00000448656 CHRNA1P02708 482 aa12.73□□□□□ -0.37
CCDC148-205ENST00000448656 ITGB3P05106 788 aa12.73□□□□□ -0.37
CCDC148-205ENST00000448656 PDE6CP51160 858 aa12.73□□□□□ -0.37
CCDC148-205ENST00000448656 NAP1L1P55209 391 aaKnown RBP12.73□□□□□ -0.37
CCDC148-205ENST00000448656 ALKBH5Q6P6C2 394 aaKnown RBP12.73□□□□□ -0.37
CCDC148-205ENST00000448656 ZNF662Q6ZS27 426 aa12.73□□□□□ -0.37
CCDC148-205ENST00000448656 RPAINQ86UA6 219 aa12.73□□□□□ -0.37
CCDC148-205ENST00000448656 NT5DC4Q86YG4 428 aa12.73□□□□□ -0.37
CCDC148-205ENST00000448656 GLYCTKQ8IVS8 523 aa12.73□□□□□ -0.37
CCDC148-205ENST00000448656 U2AF1L4Q8WU68 220 aaKnown RBP12.73□□□□□ -0.37
CCDC148-205ENST00000448656 AGPAT1Q99943 283 aa12.73□□□□□ -0.37
CCDC148-205ENST00000448656 SENP6Q9GZR1 1112 aaPredicted RBP12.73□□□□□ -0.37
CCDC148-205ENST00000448656 UNC93B1Q9H1C4 597 aa12.73□□□□□ -0.37
CCDC148-205ENST00000448656 PLEKHA5Q9HAU0 1116 aa12.73□□□□□ -0.37
CCDC148-205ENST00000448656 APOBEC3GQ9HC16 384 aaKnown RBP12.73□□□□□ -0.37
CCDC148-205ENST00000448656 MYO1AQ9UBC5 1043 aa12.73□□□□□ -0.37
CCDC148-205ENST00000448656 ST3GAL5Q9UNP4 418 aa12.73□□□□□ -0.37
CCDC148-205ENST00000448656 HES2Q9Y543 173 aa12.73□□□□□ -0.37
CCDC148-205ENST00000448656 NUB1Q9Y5A7 615 aa12.73□□□□□ -0.37
CCDC148-205ENST00000448656 PCDHB4Q9Y5E5 795 aa12.73□□□□□ -0.37
CCDC148-205ENST00000448656 A0A0U1RQG5 324 aaPredicted RBP12.72□□□□□ -0.37
CCDC148-205ENST00000448656 MACROD2A1Z1Q3 448 aa12.72□□□□□ -0.37
CCDC148-205ENST00000448656 RCCD1A6NED2 376 aa12.72□□□□□ -0.37
CCDC148-205ENST00000448656 SGPL1O95470 568 aa12.72□□□□□ -0.37
CCDC148-205ENST00000448656 ABL1P00519 1130 aa12.72□□□□□ -0.37
CCDC148-205ENST00000448656 ZSCAN20P17040 1043 aaPredicted RBP12.72□□□□□ -0.37
CCDC148-205ENST00000448656 RPUSD2Q8IZ73 545 aaKnown RBP12.72□□□□□ -0.37
CCDC148-205ENST00000448656 C1orf127Q8N9H9 656 aa12.72□□□□□ -0.37
CCDC148-205ENST00000448656 SECISBP2LQ93073 1101 aaKnown RBP12.72□□□□□ -0.37
CCDC148-205ENST00000448656 ARID3AQ99856 593 aa12.72□□□□□ -0.37
CCDC148-205ENST00000448656 LACRTQ9GZZ8 138 aa12.72□□□□□ -0.37
CCDC148-205ENST00000448656 NXF3Q9H4D5 531 aaKnown RBP12.72□□□□□ -0.37
CCDC148-205ENST00000448656 WBP1LQ9NX94 342 aa12.72□□□□□ -0.37
CCDC148-205ENST00000448656 NAGPAQ9UK23 515 aa12.72□□□□□ -0.37
CCDC148-205ENST00000448656 C2CD2Q9Y426 696 aa12.72□□□□□ -0.37
CCDC148-205ENST00000448656 TMCO5BA8MYB1 307 aa12.71□□□□□ -0.37
CCDC148-205ENST00000448656 DDX3XO00571 662 aaKnown RBP eCLIP12.71□□□□□ -0.37
CCDC148-205ENST00000448656 AKAP5P24588 427 aa12.71□□□□□ -0.37
CCDC148-205ENST00000448656 BPIFB4P59827 614 aa12.71□□□□□ -0.37
CCDC148-205ENST00000448656 MGAT3Q09327 533 aa12.71□□□□□ -0.37
CCDC148-205ENST00000448656 NAB2Q15742 525 aa12.71□□□□□ -0.37
CCDC148-205ENST00000448656 TAF3Q5VWG9 929 aa12.71□□□□□ -0.37
CCDC148-205ENST00000448656 SLC47A2Q86VL8 602 aa12.71□□□□□ -0.37
CCDC148-205ENST00000448656 LNX1Q8TBB1 728 aaPredicted RBP12.71□□□□□ -0.37
CCDC148-205ENST00000448656 TAF4BQ92750 862 aa12.71□□□□□ -0.37
CCDC148-205ENST00000448656 SNX27Q96L92 541 aa12.71□□□□□ -0.37
CCDC148-205ENST00000448656 DEFB118Q96PH6 123 aa12.71□□□□□ -0.37
CCDC148-205ENST00000448656 NIF3L1Q9GZT8 377 aa12.71□□□□□ -0.37
CCDC148-205ENST00000448656 DPP3Q9NY33 737 aa12.71□□□□□ -0.37
CCDC148-205ENST00000448656 CENPFP49454 3210 aa12.71□□□□□ -0.37
CCDC148-205ENST00000448656 MEFVO15553 781 aaPredicted RBP12.71□□□□□ -0.38
CCDC148-205ENST00000448656 RECQL4O94761 1208 aa12.71□□□□□ -0.38
CCDC148-205ENST00000448656 CYP11B1P15538 503 aa12.71□□□□□ -0.38
CCDC148-205ENST00000448656 POLR2BP30876 1174 aaKnown RBP12.71□□□□□ -0.38
CCDC148-205ENST00000448656 PAK2Q13177 524 aa12.71□□□□□ -0.38
CCDC148-205ENST00000448656 ZNF667Q5HYK9 610 aa12.71□□□□□ -0.38
CCDC148-205ENST00000448656 UBXN11Q5T124 520 aa12.71□□□□□ -0.38
CCDC148-205ENST00000448656 SCARA3Q6AZY7 606 aa12.71□□□□□ -0.38
CCDC148-205ENST00000448656 TMEM270Q6UE05 265 aa12.71□□□□□ -0.38
CCDC148-205ENST00000448656 SCARA5Q6ZMJ2 495 aa12.71□□□□□ -0.38
CCDC148-205ENST00000448656 HACE1Q8IYU2 909 aa12.71□□□□□ -0.38
CCDC148-205ENST00000448656 SLC35F6Q8N357 371 aa12.71□□□□□ -0.38
CCDC148-205ENST00000448656 BEST2Q8NFU1 509 aa12.71□□□□□ -0.38
CCDC148-205ENST00000448656 EPS8L1Q8TE68 723 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms