RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 RXFP1Q9HBX9 757 aa27.18■■□□□ 1.94
UFD1-204ENST00000447868 USP15Q9Y4E8 981 aaPredicted RBP27.18■■□□□ 1.94
UFD1-204ENST00000447868 FAM237AA0A1B0GTK4 181 aa27.17■■□□□ 1.94
UFD1-204ENST00000447868 TULP1O00294 542 aaPredicted RBP27.17■■□□□ 1.94
UFD1-204ENST00000447868 ADH1AP07327 375 aa27.17■■□□□ 1.94
UFD1-204ENST00000447868 RPL9P32969 192 aaKnown RBP27.17■■□□□ 1.94
UFD1-204ENST00000447868 SMAD2Q15796 467 aaKnown RBP27.17■■□□□ 1.94
UFD1-204ENST00000447868 SAAL1Q96ER3 474 aa27.17■■□□□ 1.94
UFD1-204ENST00000447868 UBQLN1Q9UMX0 589 aaKnown RBP27.17■■□□□ 1.94
UFD1-204ENST00000447868 VWA8A3KMH1 1905 aa27.17■■□□□ 1.94
UFD1-204ENST00000447868 PVALEFA0A1B0GWK0 134 aa27.16■■□□□ 1.94
UFD1-204ENST00000447868 HOXB8P17481 243 aaPredicted RBP27.16■■□□□ 1.94
UFD1-204ENST00000447868 JADE1Q6IE81 842 aa27.16■■□□□ 1.94
UFD1-204ENST00000447868 CD302Q8IX05 232 aa27.16■■□□□ 1.94
UFD1-204ENST00000447868 C12orf76Q8N812 135 aaPredicted RBP27.16■■□□□ 1.94
UFD1-204ENST00000447868 ZSWIM2Q8NEG5 633 aa27.16■■□□□ 1.94
UFD1-204ENST00000447868 NOC3LQ8WTT2 800 aaKnown RBP27.16■■□□□ 1.94
UFD1-204ENST00000447868 FAM213AQ9BRX8 229 aa27.16■■□□□ 1.94
UFD1-204ENST00000447868 S1PR5Q9H228 398 aa27.16■■□□□ 1.94
UFD1-204ENST00000447868 PCIF1Q9H4Z3 704 aa27.16■■□□□ 1.94
UFD1-204ENST00000447868 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.16■■□□□ 1.94
UFD1-204ENST00000447868 NUB1Q9Y5A7 615 aa27.16■■□□□ 1.94
UFD1-204ENST00000447868 ANK1P16157 1881 aa27.16■■□□□ 1.94
UFD1-204ENST00000447868 PLXNA3P51805 1871 aa27.16■■□□□ 1.94
UFD1-204ENST00000447868 SPDYE4A6NLX3 237 aa27.15■■□□□ 1.94
UFD1-204ENST00000447868 EIF3DO15371 548 aaKnown RBP eCLIP27.15■■□□□ 1.94
UFD1-204ENST00000447868 TRAPPC3O43617 180 aa27.15■■□□□ 1.94
UFD1-204ENST00000447868 ADRB2P07550 413 aa27.15■■□□□ 1.94
UFD1-204ENST00000447868 GUCY2FP51841 1108 aa27.15■■□□□ 1.94
UFD1-204ENST00000447868 CREMQ03060 361 aa27.15■■□□□ 1.94
UFD1-204ENST00000447868 EHHADHQ08426 723 aa27.15■■□□□ 1.94
UFD1-204ENST00000447868 ZBTB6Q15916 424 aa27.15■■□□□ 1.94
UFD1-204ENST00000447868 RARS2Q5T160 578 aaKnown RBP27.15■■□□□ 1.94
UFD1-204ENST00000447868 KANK3Q6NY19 840 aa27.15■■□□□ 1.94
UFD1-204ENST00000447868 CRELD2Q6UXH1 353 aaPredicted RBP27.15■■□□□ 1.94
UFD1-204ENST00000447868 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.15■■□□□ 1.94
UFD1-204ENST00000447868 EPM2AIP1Q7L775 607 aaPredicted RBP27.15■■□□□ 1.94
UFD1-204ENST00000447868 PALB2Q86YC2 1186 aa27.15■■□□□ 1.94
UFD1-204ENST00000447868 FBXL18Q96ME1 805 aa27.15■■□□□ 1.94
UFD1-204ENST00000447868 CBWD1Q9BRT8 395 aa27.15■■□□□ 1.94
UFD1-204ENST00000447868 SLC39A2Q9NP94 309 aa27.15■■□□□ 1.94
UFD1-204ENST00000447868 DZANK1Q9NVP4 752 aa27.15■■□□□ 1.94
UFD1-204ENST00000447868 FNIP2Q9P278 1114 aa27.15■■□□□ 1.94
UFD1-204ENST00000447868 GOLGA8IPA6NC78 632 aa27.14■■□□□ 1.94
UFD1-204ENST00000447868 GOLGA8JA6NMD2 632 aa27.14■■□□□ 1.94
UFD1-204ENST00000447868 TNFRSF10AO00220 468 aa27.14■■□□□ 1.94
UFD1-204ENST00000447868 XPOTO43592 962 aaKnown RBP27.14■■□□□ 1.94
UFD1-204ENST00000447868 NFICP08651 508 aa27.14■■□□□ 1.94
UFD1-204ENST00000447868 GARTP22102 1010 aa27.14■■□□□ 1.94
UFD1-204ENST00000447868 FGFR3P22607 806 aa27.14■■□□□ 1.94
UFD1-204ENST00000447868 TKTP29401 623 aaKnown RBP27.14■■□□□ 1.94
UFD1-204ENST00000447868 HOXD13P35453 343 aa27.14■■□□□ 1.94
UFD1-204ENST00000447868 PSMD5Q16401 504 aa27.14■■□□□ 1.94
UFD1-204ENST00000447868 ARMCX5Q6P1M9 558 aa27.14■■□□□ 1.94
UFD1-204ENST00000447868 NELFCDQ8IXH7 590 aa27.14■■□□□ 1.94
UFD1-204ENST00000447868 GPR65Q8IYL9 337 aa27.14■■□□□ 1.94
UFD1-204ENST00000447868 LNX1Q8TBB1 728 aaPredicted RBP27.14■■□□□ 1.94
UFD1-204ENST00000447868 ZNF507Q8TCN5 953 aa27.14■■□□□ 1.94
UFD1-204ENST00000447868 PIK3R5Q8WYR1 880 aa27.14■■□□□ 1.94
UFD1-204ENST00000447868 TTC28Q96AY4 2481 aa27.13■■□□□ 1.93
UFD1-204ENST00000447868 GOLGA6L4A6NEF3 574 aa27.13■■□□□ 1.93
UFD1-204ENST00000447868 KLRC4O43908 158 aa27.13■■□□□ 1.93
UFD1-204ENST00000447868 GLUD1P00367 558 aa27.13■■□□□ 1.93
UFD1-204ENST00000447868 SPATA31D3P0C874 917 aa27.13■■□□□ 1.93
UFD1-204ENST00000447868 CYP3A5P20815 502 aa27.13■■□□□ 1.93
UFD1-204ENST00000447868 TMEM132DQ14C87 1099 aa27.13■■□□□ 1.93
UFD1-204ENST00000447868 SPATA31D4Q6ZUB0 917 aa27.13■■□□□ 1.93
UFD1-204ENST00000447868 TSPAN18Q96SJ8 248 aa27.13■■□□□ 1.93
UFD1-204ENST00000447868 MAN1C1Q9NR34 630 aa27.13■■□□□ 1.93
UFD1-204ENST00000447868 EXOC1Q9NV70 894 aa27.13■■□□□ 1.93
UFD1-204ENST00000447868 CDH22Q9UJ99 828 aa27.13■■□□□ 1.93
UFD1-204ENST00000447868 LRPAP1P30533 357 aa27.12■■□□□ 1.93
UFD1-204ENST00000447868 SSTR3P32745 418 aaPredicted RBP27.12■■□□□ 1.93
UFD1-204ENST00000447868 MCM4P33991 863 aa27.12■■□□□ 1.93
UFD1-204ENST00000447868 ANP32AP39687 249 aaKnown RBP27.12■■□□□ 1.93
UFD1-204ENST00000447868 KMT5BQ4FZB7 885 aa27.12■■□□□ 1.93
UFD1-204ENST00000447868 PDXDC1Q6P996 788 aa27.12■■□□□ 1.93
UFD1-204ENST00000447868 KRBA2Q6ZNG9 492 aa27.12■■□□□ 1.93
UFD1-204ENST00000447868 BEST2Q8NFU1 509 aa27.12■■□□□ 1.93
UFD1-204ENST00000447868 SCFD1Q8WVM8 642 aa27.12■■□□□ 1.93
UFD1-204ENST00000447868 ASB7Q9H672 318 aa27.12■■□□□ 1.93
UFD1-204ENST00000447868 CD320Q9NPF0 282 aa27.12■■□□□ 1.93
UFD1-204ENST00000447868 PRKAG3Q9UGI9 489 aa27.12■■□□□ 1.93
UFD1-204ENST00000447868 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.12■■□□□ 1.93
UFD1-204ENST00000447868 CUL9Q8IWT3 2517 aa27.11■■□□□ 1.93
UFD1-204ENST00000447868 C5orf42Q9H799 3197 aa27.11■■□□□ 1.93
UFD1-204ENST00000447868 ZNF202O95125 648 aa27.11■■□□□ 1.93
UFD1-204ENST00000447868 LDHAP00338 332 aaKnown RBP27.11■■□□□ 1.93
UFD1-204ENST00000447868 WEE2P0C1S8 567 aa27.11■■□□□ 1.93
UFD1-204ENST00000447868 PRR29P0C7W0 189 aa27.11■■□□□ 1.93
UFD1-204ENST00000447868 ZP2Q05996 745 aa27.11■■□□□ 1.93
UFD1-204ENST00000447868 SPATA1Q5VX52 437 aa27.11■■□□□ 1.93
UFD1-204ENST00000447868 CES5AQ6NT32 575 aa27.11■■□□□ 1.93
UFD1-204ENST00000447868 ADHFE1Q8IWW8 467 aa27.11■■□□□ 1.93
UFD1-204ENST00000447868 SUSD6Q92537 303 aa27.11■■□□□ 1.93
UFD1-204ENST00000447868 CLSTN3Q9BQT9 956 aa27.11■■□□□ 1.93
UFD1-204ENST00000447868 ADAM7Q9H2U9 754 aa27.11■■□□□ 1.93
UFD1-204ENST00000447868 CIZ1Q9ULV3 898 aaPredicted RBP27.11■■□□□ 1.93
UFD1-204ENST00000447868 DERAQ9Y315 318 aa27.11■■□□□ 1.93
UFD1-204ENST00000447868 UBE4BO95155 1302 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms