RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 RHOVQ96L33 236 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 MYADMQ96S97 322 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 NUP88Q99567 741 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-205ENST00000447267 TCF25Q9BQ70 676 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 RPP25Q9BUL9 199 aaKnown RBP5.97□□□□□ -1.45
SDCBP-205ENST00000447267 EDEM2Q9BV94 578 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 VCPKMTQ9H867 229 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 LTB4R2Q9NPC1 389 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 ENTPD7Q9NQZ7 604 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 POLR3KQ9Y2Y1 108 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-205ENST00000447267 NLRC5Q86WI3 1866 aa5.96□□□□□ -1.45
SDCBP-205ENST00000447267 CELSR3Q9NYQ7 3312 aa5.96□□□□□ -1.45
SDCBP-205ENST00000447267 B8ZZF3 427 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 DNAJA2O60884 412 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 CILPO75339 1184 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 F13A1P00488 732 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 PF4P02776 101 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 EPCAMP16422 314 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 CSRP1P21291 193 aaKnown RBP5.96□□□□□ -1.46
SDCBP-205ENST00000447267 GDNFP39905 211 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 ST13P50502 369 aaKnown RBP5.96□□□□□ -1.46
SDCBP-205ENST00000447267 DYNLL1P63167 89 aaKnown RBP5.96□□□□□ -1.46
SDCBP-205ENST00000447267 GSTO1P78417 241 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 SIM1P81133 766 aaPredicted RBP5.96□□□□□ -1.46
SDCBP-205ENST00000447267 PDE4BQ07343 736 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 LMOD3Q0VAK6 560 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 TRIM26Q12899 539 aaPredicted RBP5.96□□□□□ -1.46
SDCBP-205ENST00000447267 PSMD2Q13200 908 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 LY6DQ14210 128 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 NONOQ15233 471 aaKnown RBP eCLIP5.96□□□□□ -1.46
SDCBP-205ENST00000447267 TSNAXIP1Q2TAA8 658 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 UAP1L1Q3KQV9 507 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 SLC44A4Q53GD3 710 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 ZBTB41Q5SVQ8 909 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 SPOUT1Q5T280 376 aaKnown RBP5.96□□□□□ -1.46
SDCBP-205ENST00000447267 SLC6A19Q695T7 634 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 ATF7IPQ6VMQ6 1270 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 THNSL1Q8IYQ7 743 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 CLDN23Q96B33 292 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 KIRREL1Q96J84 757 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 KLHL5Q96PQ7 755 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 GPR20Q99678 358 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 DDX23Q9BUQ8 820 aaKnown RBP5.96□□□□□ -1.46
SDCBP-205ENST00000447267 SEMA4CQ9C0C4 833 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 SP110Q9HB58 689 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 HSPBP1Q9NZL4 362 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 SLAMF8Q9P0V8 285 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 IL17BQ9UHF5 180 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 SERPINB13Q9UIV8 391 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 COL12A1Q99715 3063 aa5.96□□□□□ -1.46
SDCBP-205ENST00000447267 DBX1A6NMT0 343 aa5.95□□□□□ -1.46
SDCBP-205ENST00000447267 GRM8O00222 908 aa5.95□□□□□ -1.46
SDCBP-205ENST00000447267 GLI1P08151 1106 aa5.95□□□□□ -1.46
SDCBP-205ENST00000447267 CA8P35219 290 aa5.95□□□□□ -1.46
SDCBP-205ENST00000447267 AFMP43652 599 aa5.95□□□□□ -1.46
SDCBP-205ENST00000447267 UBE3AQ05086 875 aa5.95□□□□□ -1.46
SDCBP-205ENST00000447267 MLF2Q15773 248 aaPredicted RBP5.95□□□□□ -1.46
SDCBP-205ENST00000447267 ATP2B3Q16720 1220 aa5.95□□□□□ -1.46
SDCBP-205ENST00000447267 BEND3Q5T5X7 828 aa5.95□□□□□ -1.46
SDCBP-205ENST00000447267 ADGRA1Q86SQ6 560 aa5.95□□□□□ -1.46
SDCBP-205ENST00000447267 CMTR2Q8IYT2 770 aaKnown RBP5.95□□□□□ -1.46
SDCBP-205ENST00000447267 LSM14AQ8ND56 463 aaKnown RBP5.95□□□□□ -1.46
SDCBP-205ENST00000447267 NOL10Q9BSC4 688 aaKnown RBP5.95□□□□□ -1.46
SDCBP-205ENST00000447267 PRORYQ9H606 182 aa5.95□□□□□ -1.46
SDCBP-205ENST00000447267 VTA1Q9NP79 307 aa5.95□□□□□ -1.46
SDCBP-205ENST00000447267 A1CFQ9NQ94 594 aaKnown RBP5.95□□□□□ -1.46
SDCBP-205ENST00000447267 SLC2A4RGQ9NR83 387 aa5.95□□□□□ -1.46
SDCBP-205ENST00000447267 ADAM30Q9UKF2 790 aa5.95□□□□□ -1.46
SDCBP-205ENST00000447267 CEP131Q9UPN4 1083 aa5.95□□□□□ -1.46
SDCBP-205ENST00000447267 TMX2Q9Y320 296 aa5.95□□□□□ -1.46
SDCBP-205ENST00000447267 PCDHB12Q9Y5F1 795 aa5.95□□□□□ -1.46
SDCBP-205ENST00000447267 RELNP78509 3460 aa5.95□□□□□ -1.46
SDCBP-205ENST00000447267 URB1O60287 2271 aaKnown RBP5.95□□□□□ -1.46
SDCBP-205ENST00000447267 SDK1Q7Z5N4 2213 aa5.94□□□□□ -1.46
SDCBP-205ENST00000447267 ZBED4O75132 1171 aa5.94□□□□□ -1.46
SDCBP-205ENST00000447267 GARTP22102 1010 aa5.94□□□□□ -1.46
SDCBP-205ENST00000447267 KIR3DL1P43629 444 aa5.94□□□□□ -1.46
SDCBP-205ENST00000447267 ABCG1P45844 678 aa5.94□□□□□ -1.46
SDCBP-205ENST00000447267 FAM193AP78312 1265 aa5.94□□□□□ -1.46
SDCBP-205ENST00000447267 SATB1Q01826 763 aa5.94□□□□□ -1.46
SDCBP-205ENST00000447267 CAMK2GQ13555 558 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-205ENST00000447267 LETM2Q2VYF4 491 aa5.94□□□□□ -1.46
SDCBP-205ENST00000447267 KRTAP21-3Q3LHN1 58 aa5.94□□□□□ -1.46
SDCBP-205ENST00000447267 ZNF746Q6NUN9 644 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-205ENST00000447267 CHST3Q7LGC8 479 aa5.94□□□□□ -1.46
SDCBP-205ENST00000447267 GPR149Q86SP6 731 aa5.94□□□□□ -1.46
SDCBP-205ENST00000447267 RTN4RL1Q86UN2 441 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-205ENST00000447267 C1QL4Q86Z23 238 aa5.94□□□□□ -1.46
SDCBP-205ENST00000447267 CHST13Q8NET6 341 aa5.94□□□□□ -1.46
SDCBP-205ENST00000447267 FBXO27Q8NI29 283 aa5.94□□□□□ -1.46
SDCBP-205ENST00000447267 PIWIL2Q8TC59 973 aaKnown RBP5.94□□□□□ -1.46
SDCBP-205ENST00000447267 FAM84AQ96KN4 292 aa5.94□□□□□ -1.46
SDCBP-205ENST00000447267 ALPK1Q96QP1 1244 aa5.94□□□□□ -1.46
SDCBP-205ENST00000447267 SLF1Q9BQI6 1058 aa5.94□□□□□ -1.46
SDCBP-205ENST00000447267 OSBPL6Q9BZF3 934 aa5.94□□□□□ -1.46
SDCBP-205ENST00000447267 BICC1Q9H694 974 aaKnown RBP5.94□□□□□ -1.46
SDCBP-205ENST00000447267 C9orf78Q9NZ63 289 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-205ENST00000447267 CTDP1Q9Y5B0 961 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-205ENST00000447267 MCM3APO60318 1980 aa5.94□□□□□ -1.46
SDCBP-205ENST00000447267 SHROOM3Q8TF72 1996 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms