RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 TTC26A0AVF1 554 aa17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 VPS37CA5D8V6 355 aaPredicted RBP17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 SYN3O14994 580 aa17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 CXCL8P10145 99 aa17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 NPR3P17342 541 aa17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 SCP2P22307 547 aa17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 CLCN5P51795 746 aa17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 NTHL1P78549 312 aa17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 RESTQ13127 1097 aa17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 MAPK8IP2Q13387 824 aaPredicted RBP17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 HTR4Q13639 388 aa17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 PPM1LQ5SGD2 360 aa17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 VARS2Q5ST30 1063 aaKnown RBP17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 CWF19L1Q69YN2 538 aaKnown RBP17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 ASTLQ6HA08 431 aaPredicted RBP17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 USP49Q70CQ1 688 aa17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 GET4Q7L5D6 327 aaPredicted RBP17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 SLC44A3Q8N4M1 653 aa17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 BACH2Q9BYV9 841 aa17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 PLEKHA5Q9HAU0 1116 aa17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 PARVGQ9HBI0 331 aa17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 TBX20Q9UMR3 447 aa17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 CLIC4Q9Y696 253 aa17.31■□□□□ 0.36
SPTLC1P1-201ENST00000447199 ZFHX2Q9C0A1 2572 aaPredicted RBP17.3■□□□□ 0.36
SPTLC1P1-201ENST00000447199 CCL16O15467 120 aa17.3■□□□□ 0.36
SPTLC1P1-201ENST00000447199 GALR2O43603 387 aaPredicted RBP17.3■□□□□ 0.36
SPTLC1P1-201ENST00000447199 ADRB2P07550 413 aa17.3■□□□□ 0.36
SPTLC1P1-201ENST00000447199 CLTAP09496 248 aa17.3■□□□□ 0.36
SPTLC1P1-201ENST00000447199 SYT1P21579 422 aa17.3■□□□□ 0.36
SPTLC1P1-201ENST00000447199 FSHRP23945 695 aa17.3■□□□□ 0.36
SPTLC1P1-201ENST00000447199 ROR1Q01973 937 aa17.3■□□□□ 0.36
SPTLC1P1-201ENST00000447199 DHX8Q14562 1220 aaKnown RBP17.3■□□□□ 0.36
SPTLC1P1-201ENST00000447199 ZBTB6Q15916 424 aa17.3■□□□□ 0.36
SPTLC1P1-201ENST00000447199 TMEM130Q8N3G9 435 aa17.3■□□□□ 0.36
SPTLC1P1-201ENST00000447199 MYCT1Q8N699 235 aa17.3■□□□□ 0.36
SPTLC1P1-201ENST00000447199 EPSTI1Q96J88 318 aa17.3■□□□□ 0.36
SPTLC1P1-201ENST00000447199 SUSD3Q96L08 255 aa17.3■□□□□ 0.36
SPTLC1P1-201ENST00000447199 TUBGCP4Q9UGJ1 667 aa17.3■□□□□ 0.36
SPTLC1P1-201ENST00000447199 FBXO2Q9UK22 296 aaPredicted RBP17.3■□□□□ 0.36
SPTLC1P1-201ENST00000447199 ZFP37Q9Y6Q3 630 aaPredicted RBP17.3■□□□□ 0.36
SPTLC1P1-201ENST00000447199 WDR27A2RRH5 827 aa17.29■□□□□ 0.36
SPTLC1P1-201ENST00000447199 XYLBO75191 536 aa17.29■□□□□ 0.36
SPTLC1P1-201ENST00000447199 ABLIM3O94929 683 aa17.29■□□□□ 0.36
SPTLC1P1-201ENST00000447199 LRPAP1P30533 357 aa17.29■□□□□ 0.36
SPTLC1P1-201ENST00000447199 DDIT3P35638 169 aa17.29■□□□□ 0.36
SPTLC1P1-201ENST00000447199 TNFSF9P41273 254 aa17.29■□□□□ 0.36
SPTLC1P1-201ENST00000447199 GTF2BQ00403 316 aa17.29■□□□□ 0.36
SPTLC1P1-201ENST00000447199 ENOX2Q16206 610 aaKnown RBP17.29■□□□□ 0.36
SPTLC1P1-201ENST00000447199 ZBTB41Q5SVQ8 909 aa17.29■□□□□ 0.36
SPTLC1P1-201ENST00000447199 FAM173BQ6P4H8 233 aa17.29■□□□□ 0.36
SPTLC1P1-201ENST00000447199 SLC39A4Q6P5W5 647 aa17.29■□□□□ 0.36
SPTLC1P1-201ENST00000447199 LARP4BQ92615 738 aaKnown RBP17.29■□□□□ 0.36
SPTLC1P1-201ENST00000447199 INTS4Q96HW7 963 aaKnown RBP17.29■□□□□ 0.36
SPTLC1P1-201ENST00000447199 CDH7Q9ULB5 785 aa17.29■□□□□ 0.36
SPTLC1P1-201ENST00000447199 SRPRBQ9Y5M8 271 aaKnown RBP17.29■□□□□ 0.36
SPTLC1P1-201ENST00000447199 MORC2Q9Y6X9 1032 aaPredicted RBP17.29■□□□□ 0.36
SPTLC1P1-201ENST00000447199 WDR87Q6ZQQ6 2873 aa17.29■□□□□ 0.36
SPTLC1P1-201ENST00000447199 A0A0B4J269 797 aa17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 ARHGEF37A1IGU5 675 aa17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 K7ENM7 598 aa17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 HNRNPDLO14979 420 aaKnown RBP17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 TRAK2O60296 914 aa17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 FAM13AO94988 1023 aa17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 SRFP11831 508 aa17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 SPECC1Q5M775 1068 aa17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 MAP4K3Q8IVH8 894 aa17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 ZNF461Q8TAF7 563 aa17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 ITFG1Q8TB96 612 aa17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 FGF13Q92913 245 aa17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 BICD1Q96G01 975 aa17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 MFSD1Q9H3U5 465 aa17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 ST6GALNAC4Q9H4F1 302 aa17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 HCFC1R1Q9NWW0 138 aa17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 DNMT3BQ9UBC3 853 aaKnown RBP17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 WNT16Q9UBV4 365 aa17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 NUB1Q9Y5A7 615 aa17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 NUMBLQ9Y6R0 609 aa17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 CFAP54Q96N23 3096 aa17.28■□□□□ 0.36
SPTLC1P1-201ENST00000447199 CITO14578 2027 aa17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 DOCK6Q96HP0 2047 aa17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 KRBA1A5PL33 1030 aa17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 LACTBL1A8MY62 500 aa17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 OGTO15294 1046 aa17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 ATF2P15336 505 aa17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 AOC1P19801 751 aa17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 CYP3A5P20815 502 aa17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 MARCKSP29966 332 aaPredicted RBP17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 NMT1P30419 496 aaKnown RBP17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 AARSP49588 968 aaKnown RBP eCLIP17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 LIG4P49917 911 aa17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 SPAG1Q07617 926 aa17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 KYAT1Q16773 422 aa17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 TCEAL8Q8IYN2 117 aa17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 SIX5Q8N196 739 aa17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 RASSF8Q8NHQ8 419 aa17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 FGF14Q92915 247 aa17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 CLIC6Q96NY7 704 aa17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 RPP25Q9BUL9 199 aaKnown RBP17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 AVENQ9NQS1 362 aaPredicted RBP17.27■□□□□ 0.36
SPTLC1P1-201ENST00000447199 FBXL5Q9UKA1 691 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms