RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 GPR152Q8TDT2 470 aa19.89■□□□□ 0.77
COL9A1-205ENST00000447041 FGF14Q92915 247 aa19.89■□□□□ 0.77
COL9A1-205ENST00000447041 REEP2Q9BRK0 252 aa19.89■□□□□ 0.77
COL9A1-205ENST00000447041 IRF2BPLQ9H1B7 796 aa19.89■□□□□ 0.77
COL9A1-205ENST00000447041 WNT16Q9UBV4 365 aa19.89■□□□□ 0.77
COL9A1-205ENST00000447041 TUBGCP4Q9UGJ1 667 aa19.89■□□□□ 0.77
COL9A1-205ENST00000447041 CDH7Q9ULB5 785 aa19.89■□□□□ 0.77
COL9A1-205ENST00000447041 MYH15Q9Y2K3 1946 aa19.89■□□□□ 0.77
COL9A1-205ENST00000447041 NOTCH4Q99466 2003 aa19.88■□□□□ 0.77
COL9A1-205ENST00000447041 WDR27A2RRH5 827 aa19.88■□□□□ 0.77
COL9A1-205ENST00000447041 POU2F2P09086 479 aa19.88■□□□□ 0.77
COL9A1-205ENST00000447041 CXCL8P10145 99 aa19.88■□□□□ 0.77
COL9A1-205ENST00000447041 MATR3P43243 847 aaKnown RBP eCLIP19.88■□□□□ 0.77
COL9A1-205ENST00000447041 UVSSAQ2YD98 709 aa19.88■□□□□ 0.77
COL9A1-205ENST00000447041 PARM1Q6UWI2 310 aa19.88■□□□□ 0.77
COL9A1-205ENST00000447041 GPBP1Q86WP2 473 aa19.88■□□□□ 0.77
COL9A1-205ENST00000447041 FGF13Q92913 245 aa19.88■□□□□ 0.77
COL9A1-205ENST00000447041 CALML4Q96GE6 196 aa19.88■□□□□ 0.77
COL9A1-205ENST00000447041 RPP25Q9BUL9 199 aaKnown RBP19.88■□□□□ 0.77
COL9A1-205ENST00000447041 BLOC1S4Q9NUP1 217 aa19.88■□□□□ 0.77
COL9A1-205ENST00000447041 LARSQ9P2J5 1176 aaKnown RBP19.88■□□□□ 0.77
COL9A1-205ENST00000447041 KCNG1Q9UIX4 513 aa19.88■□□□□ 0.77
COL9A1-205ENST00000447041 ODF2LQ9ULJ1 636 aa19.88■□□□□ 0.77
COL9A1-205ENST00000447041 NUB1Q9Y5A7 615 aa19.88■□□□□ 0.77
COL9A1-205ENST00000447041 CLDN3O15551 220 aa19.87■□□□□ 0.77
COL9A1-205ENST00000447041 PLCG1P19174 1290 aa19.87■□□□□ 0.77
COL9A1-205ENST00000447041 RPL9P32969 192 aaKnown RBP19.87■□□□□ 0.77
COL9A1-205ENST00000447041 UBA7P41226 1012 aa19.87■□□□□ 0.77
COL9A1-205ENST00000447041 SPAG1Q07617 926 aa19.87■□□□□ 0.77
COL9A1-205ENST00000447041 KARSQ15046 597 aaKnown RBP19.87■□□□□ 0.77
COL9A1-205ENST00000447041 SF3A1Q15459 793 aaKnown RBP19.87■□□□□ 0.77
COL9A1-205ENST00000447041 SLC8B1Q6J4K2 584 aa19.87■□□□□ 0.77
COL9A1-205ENST00000447041 HAUS6Q7Z4H7 955 aa19.87■□□□□ 0.77
COL9A1-205ENST00000447041 BRAPQ7Z569 592 aa19.87■□□□□ 0.77
COL9A1-205ENST00000447041 BICD1Q96G01 975 aa19.87■□□□□ 0.77
COL9A1-205ENST00000447041 DNMT3BQ9UBC3 853 aaKnown RBP19.87■□□□□ 0.77
COL9A1-205ENST00000447041 ZFP37Q9Y6Q3 630 aaPredicted RBP19.87■□□□□ 0.77
COL9A1-205ENST00000447041 VPS37CA5D8V6 355 aaPredicted RBP19.86■□□□□ 0.77
COL9A1-205ENST00000447041 K7ENM7 598 aa19.86■□□□□ 0.77
COL9A1-205ENST00000447041 SYN3O14994 580 aa19.86■□□□□ 0.77
COL9A1-205ENST00000447041 SLC26A4O43511 780 aa19.86■□□□□ 0.77
COL9A1-205ENST00000447041 TBC1D4O60343 1298 aa19.86■□□□□ 0.77
COL9A1-205ENST00000447041 MCM4P33991 863 aa19.86■□□□□ 0.77
COL9A1-205ENST00000447041 TNFSF9P41273 254 aa19.86■□□□□ 0.77
COL9A1-205ENST00000447041 ARPP19P56211 112 aa19.86■□□□□ 0.77
COL9A1-205ENST00000447041 MCM6Q14566 821 aa19.86■□□□□ 0.77
COL9A1-205ENST00000447041 PABPC1LQ4VXU2 614 aaKnown RBP19.86■□□□□ 0.77
COL9A1-205ENST00000447041 CCDC105Q8IYK2 499 aa19.86■□□□□ 0.77
COL9A1-205ENST00000447041 COL4A3Q01955 1670 aa19.86■□□□□ 0.77
COL9A1-205ENST00000447041 H0YCG3 227 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 STK25O00506 426 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 GFRA3O60609 400 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 FAM13AO94988 1023 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 BMP15O95972 392 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 LONP1P36776 959 aaKnown RBP19.85■□□□□ 0.77
COL9A1-205ENST00000447041 LIG4P49917 911 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 CUL4AQ13619 759 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 MRPL58Q14197 206 aaKnown RBP19.85■□□□□ 0.77
COL9A1-205ENST00000447041 ZBTB41Q5SVQ8 909 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 NPAS3Q8IXF0 933 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 MYCT1Q8N699 235 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 RASSF8Q8NHQ8 419 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 ZNF461Q8TAF7 563 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 ING5Q8WYH8 240 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 RAD54LQ92698 747 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 KCNN1Q92952 543 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 SUSD3Q96L08 255 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 RTP3Q9BQQ7 232 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 TBC1D17Q9HA65 648 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 ARHGEF3Q9NR81 526 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 SLC2A4RGQ9NR83 387 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 FBXL5Q9UKA1 691 aa19.85■□□□□ 0.77
COL9A1-205ENST00000447041 CACNA1HO95180 2353 aa19.84■□□□□ 0.77
COL9A1-205ENST00000447041 TTC26A0AVF1 554 aa19.84■□□□□ 0.77
COL9A1-205ENST00000447041 HNRNPDLO14979 420 aaKnown RBP19.84■□□□□ 0.77
COL9A1-205ENST00000447041 FAM189A1O60320 539 aa19.84■□□□□ 0.77
COL9A1-205ENST00000447041 ABLIM3O94929 683 aa19.84■□□□□ 0.77
COL9A1-205ENST00000447041 RFX1P22670 979 aa19.84■□□□□ 0.77
COL9A1-205ENST00000447041 ZNF131P52739 623 aa19.84■□□□□ 0.77
COL9A1-205ENST00000447041 SLC5A9Q2M3M2 681 aa19.84■□□□□ 0.77
COL9A1-205ENST00000447041 CTXN3Q4LDR2 81 aa19.84■□□□□ 0.77
COL9A1-205ENST00000447041 RTL10Q7L3V2 364 aa19.84■□□□□ 0.77
COL9A1-205ENST00000447041 DDX12PQ92771 950 aa19.84■□□□□ 0.77
COL9A1-205ENST00000447041 KIF12Q96FN5 646 aa19.84■□□□□ 0.77
COL9A1-205ENST00000447041 PARVGQ9HBI0 331 aa19.84■□□□□ 0.77
COL9A1-205ENST00000447041 TBX20Q9UMR3 447 aa19.84■□□□□ 0.77
COL9A1-205ENST00000447041 ARHGEF37A1IGU5 675 aa19.83■□□□□ 0.77
COL9A1-205ENST00000447041 H7C4K7 107 aa19.83■□□□□ 0.77
COL9A1-205ENST00000447041 PRRG1O14668 218 aa19.83■□□□□ 0.77
COL9A1-205ENST00000447041 SEC24AO95486 1093 aa19.83■□□□□ 0.77
COL9A1-205ENST00000447041 LRG1P02750 347 aa19.83■□□□□ 0.77
COL9A1-205ENST00000447041 KRT18P05783 430 aaKnown RBP19.83■□□□□ 0.77
COL9A1-205ENST00000447041 RHOP08100 348 aa19.83■□□□□ 0.77
COL9A1-205ENST00000447041 CLTAP09496 248 aa19.83■□□□□ 0.77
COL9A1-205ENST00000447041 ELF1P32519 619 aa19.83■□□□□ 0.77
COL9A1-205ENST00000447041 GPC5P78333 572 aa19.83■□□□□ 0.77
COL9A1-205ENST00000447041 PPP2R3AQ06190 1150 aa19.83■□□□□ 0.77
COL9A1-205ENST00000447041 ZNF280DQ6N043 979 aa19.83■□□□□ 0.77
COL9A1-205ENST00000447041 MTSS1LQ765P7 747 aa19.83■□□□□ 0.77
COL9A1-205ENST00000447041 DTWD2Q8NBA8 298 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms