RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 EXOC3O60645 756 aa23.82■■□□□ 1.4
APOE-204ENST00000446996 B3GAT3O94766 335 aa23.82■■□□□ 1.4
APOE-204ENST00000446996 KIF4AO95239 1232 aa23.82■■□□□ 1.4
APOE-204ENST00000446996 MBD3O95983 291 aa23.82■■□□□ 1.4
APOE-204ENST00000446996 RPL13P26373 211 aaKnown RBP23.82■■□□□ 1.4
APOE-204ENST00000446996 IRS1P35568 1242 aa23.82■■□□□ 1.4
APOE-204ENST00000446996 CYP2J2P51589 502 aa23.82■■□□□ 1.4
APOE-204ENST00000446996 ZCWPW2Q504Y3 356 aa23.82■■□□□ 1.4
APOE-204ENST00000446996 FOXR2Q6PJQ5 311 aa23.82■■□□□ 1.4
APOE-204ENST00000446996 CD300LGQ6UXG3 332 aa23.82■■□□□ 1.4
APOE-204ENST00000446996 CBWD2Q8IUF1 395 aa23.82■■□□□ 1.4
APOE-204ENST00000446996 MRPL43Q8N983 215 aaKnown RBP23.82■■□□□ 1.4
APOE-204ENST00000446996 DHTKD1Q96HY7 919 aaPredicted RBP23.82■■□□□ 1.4
APOE-204ENST00000446996 MFSD14AQ96MC6 490 aa23.82■■□□□ 1.4
APOE-204ENST00000446996 CDCA3Q99618 268 aaPredicted RBP23.82■■□□□ 1.4
APOE-204ENST00000446996 NUP62CLQ9H1M0 184 aa23.82■■□□□ 1.4
APOE-204ENST00000446996 GOLGA2P5Q9HBQ8 144 aa23.82■■□□□ 1.4
APOE-204ENST00000446996 ENTPD7Q9NQZ7 604 aa23.82■■□□□ 1.4
APOE-204ENST00000446996 CHST7Q9NS84 486 aa23.82■■□□□ 1.4
APOE-204ENST00000446996 NR3C1P04150 777 aa23.81■■□□□ 1.4
APOE-204ENST00000446996 NFICP08651 508 aa23.81■■□□□ 1.4
APOE-204ENST00000446996 SPAG1Q07617 926 aa23.81■■□□□ 1.4
APOE-204ENST00000446996 PSMD6Q15008 389 aa23.81■■□□□ 1.4
APOE-204ENST00000446996 CAMK4Q16566 473 aa23.81■■□□□ 1.4
APOE-204ENST00000446996 USP41Q3LFD5 358 aa23.81■■□□□ 1.4
APOE-204ENST00000446996 SMYD4Q8IYR2 804 aaPredicted RBP23.81■■□□□ 1.4
APOE-204ENST00000446996 GPR62Q9BZJ7 368 aa23.81■■□□□ 1.4
APOE-204ENST00000446996 CACNG4Q9UBN1 327 aa23.81■■□□□ 1.4
APOE-204ENST00000446996 TUBGCP4Q9UGJ1 667 aa23.81■■□□□ 1.4
APOE-204ENST00000446996 CXCL14O95715 111 aa23.8■■□□□ 1.4
APOE-204ENST00000446996 DSG1Q02413 1049 aa23.8■■□□□ 1.4
APOE-204ENST00000446996 ENPEPQ07075 957 aa23.8■■□□□ 1.4
APOE-204ENST00000446996 CYP24A1Q07973 514 aa23.8■■□□□ 1.4
APOE-204ENST00000446996 TCEAL5Q5H9L2 206 aa23.8■■□□□ 1.4
APOE-204ENST00000446996 KIAA0319Q5VV43 1072 aa23.8■■□□□ 1.4
APOE-204ENST00000446996 EFCAB13Q8IY85 973 aa23.8■■□□□ 1.4
APOE-204ENST00000446996 GPT2Q8TD30 523 aa23.8■■□□□ 1.4
APOE-204ENST00000446996 PDE11AQ9HCR9 933 aa23.8■■□□□ 1.4
APOE-204ENST00000446996 PRUNE2Q8WUY3 3088 aa23.8■■□□□ 1.4
APOE-204ENST00000446996 ANO9A1A5B4 782 aa23.79■■□□□ 1.4
APOE-204ENST00000446996 F8W810 466 aa23.79■■□□□ 1.4
APOE-204ENST00000446996 PIRO00625 290 aa23.79■■□□□ 1.4
APOE-204ENST00000446996 PSMA7O14818 248 aa23.79■■□□□ 1.4
APOE-204ENST00000446996 LILRB3O75022 631 aa23.79■■□□□ 1.4
APOE-204ENST00000446996 CCNE1P24864 410 aa23.79■■□□□ 1.4
APOE-204ENST00000446996 MCM4P33991 863 aa23.79■■□□□ 1.4
APOE-204ENST00000446996 GLUD2P49448 558 aa23.79■■□□□ 1.4
APOE-204ENST00000446996 LRRC63Q05C16 580 aa23.79■■□□□ 1.4
APOE-204ENST00000446996 COL19A1Q14993 1142 aa23.79■■□□□ 1.4
APOE-204ENST00000446996 PLPP4Q5VZY2 271 aa23.79■■□□□ 1.4
APOE-204ENST00000446996 PDXDC1Q6P996 788 aa23.79■■□□□ 1.4
APOE-204ENST00000446996 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.79■■□□□ 1.4
APOE-204ENST00000446996 WDR49Q8IV35 697 aa23.79■■□□□ 1.4
APOE-204ENST00000446996 RDH13Q8NBN7 331 aa23.79■■□□□ 1.4
APOE-204ENST00000446996 C3orf58Q8NDZ4 430 aa23.79■■□□□ 1.4
APOE-204ENST00000446996 NOC3LQ8WTT2 800 aaKnown RBP23.79■■□□□ 1.4
APOE-204ENST00000446996 RABGGTAQ92696 567 aa23.79■■□□□ 1.4
APOE-204ENST00000446996 TSG101Q99816 390 aa23.79■■□□□ 1.4
APOE-204ENST00000446996 MRPL17Q9NRX2 175 aaKnown RBP23.79■■□□□ 1.4
APOE-204ENST00000446996 INTS13Q9NVM9 706 aa23.79■■□□□ 1.4
APOE-204ENST00000446996 DPP3Q9NY33 737 aa23.79■■□□□ 1.4
APOE-204ENST00000446996 FRMD4BQ9Y2L6 1034 aa23.79■■□□□ 1.4
APOE-204ENST00000446996 C2orf71A6NGG8 1288 aa23.78■■□□□ 1.4
APOE-204ENST00000446996 C1RP00736 705 aa23.78■■□□□ 1.4
APOE-204ENST00000446996 URODP06132 367 aa23.78■■□□□ 1.4
APOE-204ENST00000446996 BMP6P22004 513 aa23.78■■□□□ 1.4
APOE-204ENST00000446996 NR2F2P24468 414 aa23.78■■□□□ 1.4
APOE-204ENST00000446996 WNT7BP56706 349 aa23.78■■□□□ 1.4
APOE-204ENST00000446996 MCCD1P59942 119 aaPredicted RBP23.78■■□□□ 1.4
APOE-204ENST00000446996 ADAM9Q13443 819 aa23.78■■□□□ 1.4
APOE-204ENST00000446996 PTPN14Q15678 1187 aa23.78■■□□□ 1.4
APOE-204ENST00000446996 TAS1R1Q7RTX1 841 aa23.78■■□□□ 1.4
APOE-204ENST00000446996 MICALL1Q8N3F8 863 aa23.78■■□□□ 1.4
APOE-204ENST00000446996 ANKRD36BP1Q96IX9 119 aa23.78■■□□□ 1.4
APOE-204ENST00000446996 FNBP1Q96RU3 617 aa23.78■■□□□ 1.4
APOE-204ENST00000446996 MKNK1Q9BUB5 465 aa23.78■■□□□ 1.4
APOE-204ENST00000446996 RXFP1Q9HBX9 757 aa23.78■■□□□ 1.4
APOE-204ENST00000446996 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.78■■□□□ 1.44e-8■■□□□ 12.8
APOE-204ENST00000446996 NUB1Q9Y5A7 615 aa23.78■■□□□ 1.4
APOE-204ENST00000446996 PPP1R3GB7ZBB8 358 aa23.77■■□□□ 1.4
APOE-204ENST00000446996 SYN3O14994 580 aa23.77■■□□□ 1.4
APOE-204ENST00000446996 FGFR3P22607 806 aa23.77■■□□□ 1.4
APOE-204ENST00000446996 AARSP49588 968 aaKnown RBP eCLIP23.77■■□□□ 1.4
APOE-204ENST00000446996 AP3M2P53677 418 aa23.77■■□□□ 1.4
APOE-204ENST00000446996 CREMQ03060 361 aa23.77■■□□□ 1.4
APOE-204ENST00000446996 CCDC85BQ15834 202 aaPredicted RBP23.77■■□□□ 1.4
APOE-204ENST00000446996 DUSP6Q16828 381 aa23.77■■□□□ 1.4
APOE-204ENST00000446996 DUOXA2Q1HG44 320 aa23.77■■□□□ 1.4
APOE-204ENST00000446996 C9orf57Q5W0N0 161 aa23.77■■□□□ 1.4
APOE-204ENST00000446996 ISM2Q6H9L7 571 aa23.77■■□□□ 1.4
APOE-204ENST00000446996 KIAA1841Q6NSI8 718 aa23.77■■□□□ 1.4
APOE-204ENST00000446996 ZC3H3Q8IXZ2 948 aaKnown RBP23.77■■□□□ 1.4
APOE-204ENST00000446996 SUSD3Q96L08 255 aa23.77■■□□□ 1.4
APOE-204ENST00000446996 CGRRF1Q99675 332 aa23.77■■□□□ 1.4
APOE-204ENST00000446996 TTPALQ9BTX7 342 aa23.77■■□□□ 1.4
APOE-204ENST00000446996 TLE6Q9H808 572 aa23.77■■□□□ 1.4
APOE-204ENST00000446996 FNIP2Q9P278 1114 aa23.77■■□□□ 1.4
APOE-204ENST00000446996 ITGA11Q9UKX5 1188 aa23.77■■□□□ 1.4
APOE-204ENST00000446996 CUL9Q8IWT3 2517 aa23.77■■□□□ 1.4
APOE-204ENST00000446996 VWA8A3KMH1 1905 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms