RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 IFT122Q9HBG6 1241 aa10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 STIM2Q9P246 746 aa10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 CPSF3Q9UKF6 684 aaKnown RBP10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 GINS2Q9Y248 185 aa10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 NOC2LQ9Y3T9 749 aaKnown RBP10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 PGRMC1O00264 195 aaKnown RBP10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 CES2O00748 559 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 MAGEB2O15479 319 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 DYNC1LI2O43237 492 aaPredicted RBP10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 KRT19P08727 400 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 CLTAP09496 248 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 TMEM191BP0C7N4 346 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 CD58P19256 250 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 BPIFB4P59827 614 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 TNNC1P63316 161 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 GUCY2DQ02846 1103 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 PPFIA1Q13136 1202 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 TERF2Q15554 542 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 CLEC16AQ2KHT3 1053 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 DUSP28Q4G0W2 176 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 ZNF394Q53GI3 561 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 NAA35Q5VZE5 725 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 MTHFD1LQ6UB35 978 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 ILDR2Q71H61 639 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 TMEM192Q8IY95 271 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 ZNF564Q8TBZ8 553 aaPredicted RBP10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 ACTRT1Q8TDG2 376 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 IFT81Q8WYA0 676 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 EPB41L5Q9HCM4 733 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 CNOT8Q9UFF9 292 aaKnown RBP10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 MCM3APO60318 1980 aa10.2□□□□□ -0.78
COL6A4P1-201ENST00000446690 ESYT3A0FGR9 886 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 ABLIM1O14639 778 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 MAP2K7O14733 419 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 DDX3YO15523 660 aaKnown RBP10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 HEXIM1O94992 359 aaKnown RBP10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 FGGP02679 453 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 GLI1P08151 1106 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 MMP3P08254 477 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 CFHP08603 1231 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 ACO1P21399 889 aaKnown RBP10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 COMTP21964 271 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 TBXAS1P24557 533 aaPredicted RBP10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 GNA15P30679 374 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 AP3M2P53677 418 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 TNFAIP2Q03169 654 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 TMEM62Q0P6H9 643 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 DGKDQ16760 1214 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 GLE1Q53GS7 698 aaKnown RBP10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 EMID1Q96A84 441 aaPredicted RBP10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 CYFIP2Q96F07 1278 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 CDT1Q9H211 546 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 RPF1Q9H9Y2 349 aaKnown RBP10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 PTPRHQ9HD43 1115 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 PRMT7Q9NVM4 692 aaPredicted RBP10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 SLC5A4Q9NY91 659 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 ZSCAN5CA6NGD5 496 aaPredicted RBP10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 GPR25O00155 361 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 ADCY6O43306 1168 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 THAP12O43422 761 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 SPOPO43791 374 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 TNNC2P02585 160 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 CXCL8P10145 99 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 ITGA4P13612 1032 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 PROZP22891 400 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 IRX5P78411 483 aaPredicted RBP10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 GRIK4Q16099 956 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 IQSEC1Q6DN90 963 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 SCARA5Q6ZMJ2 495 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 UBL4BQ8N7F7 174 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 RBBP8NLQ8NC74 664 aaPredicted RBP10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 ZCCHC17Q9NP64 241 aaKnown RBP10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 SETD4Q9NVD3 440 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 NXF1Q9UBU9 619 aaKnown RBP10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 TNFSF13BQ9Y275 285 aa10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 ZNFX1Q9P2E3 1918 aaKnown RBP10.19□□□□□ -0.78
COL6A4P1-201ENST00000446690 SLC15A5A6NIM6 579 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 IGF2BP3O00425 579 aaKnown RBP eCLIP10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 RAD51CO43502 376 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 CYP1A2P05177 515 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 WEE2P0C1S8 567 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 UNGP13051 313 aaPredicted RBP10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 FGFR4P22455 802 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 OAS2P29728 719 aaKnown RBP10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 NSFP46459 744 aaKnown RBP10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 GPS2Q13227 327 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 SURF1Q15526 300 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 TAF1CQ15572 869 aaPredicted RBP10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 SGSM1Q2NKQ1 1148 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 DCAF12L1Q5VU92 463 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 AADACL2Q6P093 401 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 CPNE8Q86YQ8 564 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 IFT20Q8IY31 132 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 TMEM130Q8N3G9 435 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 ALG3Q92685 438 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 KRT35Q92764 455 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 CCDC102AQ96A19 550 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 LENG1Q96BZ8 264 aaPredicted RBP10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 ANKRD36BP1Q96IX9 119 aa10.18□□□□□ -0.78
COL6A4P1-201ENST00000446690 RNPC3Q96LT9 517 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms