RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 FBXL18Q96ME1 805 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 TRIM5Q9C035 493 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 INTS2Q9H0H0 1204 aaKnown RBP8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 NDST4Q9H3R1 872 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 C1orf112Q9NSG2 853 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 TBC1D13Q9NVG8 400 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 TMEM161AQ9NX61 479 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 DPP3Q9NY33 737 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 CGNQ9P2M7 1197 aaKnown RBP8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 NXF1Q9UBU9 619 aaKnown RBP8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 LIMA1Q9UHB6 759 aaKnown RBP8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 TIMM13Q9Y5L4 95 aaPredicted RBP8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 SQORQ9Y6N5 450 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 ABHD14A-ACY1A0A1B0GW23 586 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 EPHB6O15197 1021 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 HLA-DRAP01903 254 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 THP07101 528 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 CAPN2P17655 700 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 CA8P35219 290 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 BRCC3P46736 316 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 FMO5P49326 533 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 MXI1P50539 228 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 RAB27AP51159 221 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 FAM189BP81408 668 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 BTG3Q14201 252 aaPredicted RBP8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 SYCP1Q15431 976 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 PSRC1Q6PGN9 363 aaPredicted RBP8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 ALKAL1Q6UXT8 129 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 INTS8Q75QN2 995 aaKnown RBP8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 SV2AQ7L0J3 742 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 RRAGAQ7L523 313 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 TRAPPC11Q7Z392 1133 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 TMEM173Q86WV6 379 aaPredicted RBP8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 ZNF710Q8N1W2 664 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 C3orf58Q8NDZ4 430 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 BCL7CQ8WUZ0 217 aaPredicted RBP8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 TATDN2Q93075 761 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 ANKRD36BP1Q96IX9 119 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 FAM193BQ96PV7 902 aaPredicted RBP8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 ARID3AQ99856 593 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 LPIN3Q9BQK8 851 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 NRDE2Q9H7Z3 1164 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 KIAA1586Q9HCI6 787 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 FAM207AQ9NSI2 230 aaPredicted RBP8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 GCNT4Q9P109 453 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 CNTN3Q9P232 1028 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 SIX4Q9UIU6 781 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 GIT1Q9Y2X7 761 aa8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 MRPL42Q9Y6G3 142 aaKnown RBP8.16□□□□□ -1.1
SF3A3P1-201ENST00000446317 LGALS16A8MUM7 142 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 PODXLO00592 558 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 SPTLC1O15269 473 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 TLL1O43897 1013 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 ZNF623O75123 536 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 DGKIO75912 1065 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 KIF4AO95239 1232 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 IL18RAPO95256 599 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 PARNO95453 639 aaKnown RBP8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 ADCY5O95622 1261 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 GNA14O95837 355 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 C4BPAP04003 597 aaKnown RBP8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 TPM2P07951 284 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 CD58P19256 250 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 SCP2P22307 547 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 EEF1GP26641 437 aaKnown RBP8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 SLC11A1P49279 550 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 ZNF75DP51815 510 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 CDH8P55286 799 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 SNRPFP62306 86 aaKnown RBP8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 MLLT1Q03111 559 aaPredicted RBP8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 KCNMA1Q12791 1236 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 TRPC3Q13507 836 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 NCOA4Q13772 614 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 PCBP1Q15365 356 aaKnown RBP eCLIP8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 ARHGAP44Q17R89 818 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 DUOXA2Q1HG44 320 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 TMC6Q7Z403 805 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 WDR49Q8IV35 697 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 HERC6Q8IVU3 1022 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 DRC7Q8IY82 874 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 ANKRD20A12PQ8NF67 263 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 BEST2Q8NFU1 509 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 TMC2Q8TDI7 906 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 HERVK_113Q902F9 699 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 KCNN1Q92952 543 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 TOP1MTQ969P6 601 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 PPP1R10Q96QC0 940 aaKnown RBP8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 MKNK1Q9BUB5 465 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 NKX2-4Q9H2Z4 354 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 APOBEC3GQ9HC16 384 aaKnown RBP8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 METTL14Q9HCE5 456 aaKnown RBP8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 NLRC4Q9NPP4 1024 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 SSUH2Q9Y2M2 353 aa8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 YBX2Q9Y2T7 364 aaKnown RBP8.15□□□□□ -1.1
SF3A3P1-201ENST00000446317 PTPRSQ13332 1948 aa8.15□□□□□ -1.11
SF3A3P1-201ENST00000446317 FSD2A1L4K1 749 aa8.14□□□□□ -1.11
SF3A3P1-201ENST00000446317 C2CD2LO14523 706 aa8.14□□□□□ -1.11
SF3A3P1-201ENST00000446317 NRP1O14786 923 aa8.14□□□□□ -1.11
SF3A3P1-201ENST00000446317 EOMESO95936 686 aa8.14□□□□□ -1.11
SF3A3P1-201ENST00000446317 PFKMP08237 780 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms