RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 ANO9A1A5B4 782 aa13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 PRCPP42785 496 aa13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 NRIP1P48552 1158 aa13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 AARSP49588 968 aaKnown RBP eCLIP13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 CYP2J2P51589 502 aa13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 POU5F1Q01860 360 aaKnown RBP13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 DSG1Q02413 1049 aa13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 KYAT1Q16773 422 aa13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 COBLL1Q53SF7 1204 aa13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 C1orf220Q5T0J3 134 aa13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 ISM2Q6H9L7 571 aa13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 RSPO2Q6UXX9 243 aaPredicted RBP13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 STXBP4Q6ZWJ1 553 aa13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 RBM23Q86U06 439 aaKnown RBP13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 MRPL43Q8N983 215 aaKnown RBP13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 OR5B17Q8NGF7 314 aa13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 TMEM174Q8WUU8 243 aa13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 FAM212AQ96EL1 285 aa13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 GSDMAQ96QA5 445 aa13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 ASB7Q9H672 318 aa13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 ENTPD7Q9NQZ7 604 aa13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 RBAKQ9NYW8 714 aaPredicted RBP13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 SIX4Q9UIU6 781 aa13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 TRAF3IP3Q9Y228 551 aa13.95□□□□□ -0.18
PDLIM2-212ENST00000443561 PDXKO00764 312 aa13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 ADAM12O43184 909 aa13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 KINO60870 393 aaKnown RBP13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 CLASP2O75122 1294 aaKnown RBP13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 CYP3A5P20815 502 aa13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 FGFR3P22607 806 aa13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 TKTP29401 623 aaKnown RBP13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 KRT17Q04695 432 aa13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 CYP24A1Q07973 514 aa13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 ADAM15Q13444 863 aa13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 MORC3Q14149 939 aa13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 ZNF658Q5TYW1 1059 aaPredicted RBP13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 PRSS55Q6UWB4 352 aaPredicted RBP13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 TMC7Q7Z402 723 aa13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 SLC9A9Q8IVB4 645 aa13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 ZC3H3Q8IXZ2 948 aaKnown RBP13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 C1orf127Q8N9H9 656 aa13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 SLC22A17Q8WUG5 538 aa13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 ZNF516Q92618 1163 aa13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 DDX27Q96GQ7 796 aaKnown RBP13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 BORCS6Q96GS4 357 aa13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 MED15Q96RN5 788 aa13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 COLEC11Q9BWP8 271 aa13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 CLEC1BQ9P126 229 aa13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 UBQLN1Q9UMX0 589 aaKnown RBP13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 C2CD2Q9Y426 696 aa13.94□□□□□ -0.18
PDLIM2-212ENST00000443561 C5orf42Q9H799 3197 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 TRIM49BA6NDI0 452 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 PPP1R3GB7ZBB8 358 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 BIN1O00499 593 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 PIRO00625 290 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 C2CD2LO14523 706 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 B3GAT3O94766 335 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 CXCL14O95715 111 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 NR3C1P04150 777 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 CNPP09543 421 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 RPL17P18621 184 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 SMC1AQ14683 1233 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 TMEM132DQ14C87 1099 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 SNRNP35Q16560 246 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 CAMK4Q16566 473 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 NFIL3Q16649 462 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 C9orf57Q5W0N0 161 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 DCLRE1AQ6PJP8 1040 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 CD302Q8IX05 232 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 ADSSL1Q8N142 457 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 EFHBQ8N7U6 833 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 XXYLT1Q8NBI6 393 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 LNX1Q8TBB1 728 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 SMARCE1Q969G3 411 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 MSLNLQ96KJ4 702 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 MFSD14AQ96MC6 490 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 UROC1Q96N76 676 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 KLHL5Q96PQ7 755 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 CLSTN2Q9H4D0 955 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 UBE2ZQ9H832 354 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 RXFP1Q9HBX9 757 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 NGRNQ9NPE2 291 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 SLC38A7Q9NVC3 462 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 CDH22Q9UJ99 828 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 BARX2Q9UMQ3 279 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 DERAQ9Y315 318 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 NOTCH4Q99466 2003 aa13.93□□□□□ -0.18
PDLIM2-212ENST00000443561 SF3B1O75533 1304 aaKnown RBP eCLIP13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 KIAA0391O15091 583 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 TEX28O15482 410 aa13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 TBC1D4O60343 1298 aa13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 AKAP3O75969 853 aa13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 IL18RAPO95256 599 aa13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 LDHAP00338 332 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 EPCAMP16422 314 aa13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 GLUD2P49448 558 aa13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 MCCD1P59942 119 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 SNRPFP62306 86 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 DLG4P78352 724 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms