RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 DUOXA2Q1HG44 320 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 C1orf220Q5T0J3 134 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 NT5DC4Q86YG4 428 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 TRIM59Q8IWR1 403 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 ANKRD20A12PQ8NF67 263 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 HASPINQ8TF76 798 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 CACTINQ8WUQ7 758 aaKnown RBP14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 SLC35C1Q96A29 364 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 PAAF1Q9BRP4 392 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 NKX2-4Q9H2Z4 354 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 CWH43Q9H720 699 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 DPP3Q9NY33 737 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 MSRAQ9UJ68 235 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 MTUS1Q9ULD2 1270 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 R3HCC1Q9Y3T6 440 aaKnown RBP14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 PCDHA11Q9Y5I1 949 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 NT5C1B-RDH14C9J2C7 533 aa14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 F8W810 466 aa14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 STX10O60499 249 aa14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 ARHGEF15O94989 841 aa14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 AFPP02771 609 aaKnown RBP14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 TPM2P07951 284 aa14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 LAG3P18627 525 aa14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 POLR2BP30876 1174 aaKnown RBP14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 CTNNB1P35222 781 aa14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 PIK3CAP42336 1068 aa14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 SLC11A1P49279 550 aa14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 MARSP56192 900 aaKnown RBP14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 BCAR1P56945 870 aa14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 MYL7Q01449 175 aa14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 PPP3CAQ08209 521 aa14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 DSC1Q08554 894 aa14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 TDRD10Q5VZ19 366 aaKnown RBP14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 COLGALT2Q8IYK4 626 aa14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 C1orf127Q8N9H9 656 aa14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 SP7Q8TDD2 431 aaPredicted RBP14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 ZNF516Q92618 1163 aa14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 UROC1Q96N76 676 aa14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 ZNF558Q96NG5 402 aa14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 TSPAN18Q96SJ8 248 aa14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 HSD3B7Q9H2F3 369 aa14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.65□□□□□ -0.06
TM9SF4-204ENST00000442842 LINC01553A4QN01 128 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 NRP1O14786 923 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 PPEF2O14830 753 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 KIF4AO95239 1232 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 ZNF18P17022 549 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 CYP3A5P20815 502 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 AP3M2P53677 418 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 ENPEPQ07075 957 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 TRPC3Q13507 836 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 KRT31Q15323 416 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 ZBTB6Q15916 424 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 MAN2A1Q16706 1144 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 CBWD6Q4V339 395 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 CBWD3Q5JTY5 395 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 CBWD5Q5RIA9 395 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 PPP2R2DQ66LE6 453 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 TRAPPC11Q7Z392 1133 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 SPRED2Q7Z698 418 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 GAS2L3Q86XJ1 694 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 COLGALT1Q8NBJ5 622 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 TMEM175Q9BSA9 504 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 TUBGCP2Q9BSJ2 902 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 RBSNQ9H1K0 784 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 VPS16Q9H269 839 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 TMEM8AQ9HCN3 771 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 ITGA11Q9UKX5 1188 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 AGAP1Q9UPQ3 857 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 TTC3P53804 2025 aa14.64□□□□□ -0.07
TM9SF4-204ENST00000442842 A0A1W2PPC1 479 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 CSPG5O95196 566 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 GALTP07902 379 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 DNAJB2P25686 324 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 LRPAP1P30533 357 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 FMO5P49326 533 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 ALDH7A1P49419 539 aaKnown RBP14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 CLDN10P78369 228 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 KCNH2Q12809 1159 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 VWA3BQ502W6 1294 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 C9orf57Q5W0N0 161 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 KRT39Q6A163 491 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 SCARA3Q6AZY7 606 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 KCNT2Q6UVM3 1135 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 SV2AQ7L0J3 742 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 C3orf58Q8NDZ4 430 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 ZNF560Q96MR9 790 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 C17orf80Q9BSJ5 609 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 CERS4Q9HA82 394 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 AAASQ9NRG9 546 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 SIX4Q9UIU6 781 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 FAN1Q9Y2M0 1017 aa14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 RANBP2P49792 3224 aaKnown RBP14.63□□□□□ -0.07
TM9SF4-204ENST00000442842 N4BP1O75113 896 aaKnown RBP14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 B3GAT3O94766 335 aa14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 SERPINC1P01008 464 aa14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 HLA-DRAP01903 254 aa14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 C4BPAP04003 597 aaKnown RBP14.62□□□□□ -0.07
TM9SF4-204ENST00000442842 ALDH2P05091 517 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms