RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 ENPEPQ07075 957 aa17.57■□□□□ 0.4
SEMA3B-207ENST00000441915 KYNUQ16719 465 aa17.57■□□□□ 0.4
SEMA3B-207ENST00000441915 WDR44Q5JSH3 913 aa17.57■□□□□ 0.4
SEMA3B-207ENST00000441915 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.57■□□□□ 0.46e-9■■■■□ 22.1
SEMA3B-207ENST00000441915 ANAPC5Q9UJX4 755 aa17.57■□□□□ 0.4
SEMA3B-207ENST00000441915 CD2APQ9Y5K6 639 aa17.57■□□□□ 0.4
SEMA3B-207ENST00000441915 MYPNQ86TC9 1320 aa17.57■□□□□ 0.4
SEMA3B-207ENST00000441915 MGRN1O60291 552 aa17.57■□□□□ 0.4
SEMA3B-207ENST00000441915 CENPCQ03188 943 aa17.57■□□□□ 0.4
SEMA3B-207ENST00000441915 HIBCHQ6NVY1 386 aaPredicted RBP17.57■□□□□ 0.4
SEMA3B-207ENST00000441915 PHLDB2Q86SQ0 1253 aa17.57■□□□□ 0.4
SEMA3B-207ENST00000441915 DDX27Q96GQ7 796 aaKnown RBP17.57■□□□□ 0.4
SEMA3B-207ENST00000441915 KCNK9Q9NPC2 374 aa17.57■□□□□ 0.4
SEMA3B-207ENST00000441915 DNAJC17Q9NVM6 304 aaKnown RBP17.57■□□□□ 0.4
SEMA3B-207ENST00000441915 GABBR1Q9UBS5 961 aa17.57■□□□□ 0.4
SEMA3B-207ENST00000441915 KCNG1Q9UIX4 513 aa17.57■□□□□ 0.4
SEMA3B-207ENST00000441915 TPX2Q9ULW0 747 aaKnown RBP17.57■□□□□ 0.4
SEMA3B-207ENST00000441915 ATP6V0A1Q93050 837 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 HERPUD2Q9BSE4 406 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 ADGRA3Q8IWK6 1321 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 TCP11X1B4DZS4 312 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 CREB1P16220 341 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 VPS41P49754 854 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 VSTM1Q6UX27 236 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 ZNF365Q70YC5 407 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 CCDC63Q8NA47 563 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 MCPH1Q8NEM0 835 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 MAGEC3Q8TD91 643 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 FNBP1Q96RU3 617 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 CTNNAL1Q9UBT7 734 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 USP15Q9Y4E8 981 aaPredicted RBP17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 SORBS3O60504 671 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 DKC1O60832 514 aaKnown RBP eCLIP17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 DGAT1O75907 488 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 PROSCO94903 275 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 RALAP11233 206 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 PTP4A2Q12974 167 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 C2CD6Q53TS8 623 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 FAM133BQ5BKY9 247 aaKnown RBP17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 NUGGCQ68CJ6 796 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 C15orf39Q6ZRI6 1047 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 CEP57Q86XR8 500 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 CCDC89Q8N998 374 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 BBOF1Q8ND07 529 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 HEMGNQ9BXL5 484 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 KIAA1683Q9H0B3 1180 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 PGAP2Q9UHJ9 254 aa17.56■□□□□ 0.4
SEMA3B-207ENST00000441915 TCEA3O75764 348 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 TNNI1P19237 187 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 ELF3P78545 371 aaPredicted RBP17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 DGKZQ13574 1117 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 FAM228AQ86W67 206 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 RHOT1Q8IXI2 618 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 ANKRD42Q8N9B4 389 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 MTMR14Q8NCE2 650 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 IFT74Q96LB3 600 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 FGFR1OP2Q9NVK5 253 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 R3HDM2Q9Y2K5 976 aaKnown RBP17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 PSTPIP1O43586 416 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 ZNF862O60290 1169 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 ZBED4O75132 1171 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 SUN1O94901 812 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 CYP1A1P04798 512 aaPredicted RBP17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 BRAFP15056 766 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 HSPA1LP34931 641 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 KLF1Q13351 362 aaPredicted RBP17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 CCNG2Q16589 344 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 PREPLQ4J6C6 727 aaPredicted RBP17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 LIN9Q5TKA1 542 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 LLGL2Q6P1M3 1020 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 ZNF516Q92618 1163 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 FAM84AQ96KN4 292 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 SENP7Q9BQF6 1050 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 KIAA1586Q9HCI6 787 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 MRPL47Q9HD33 250 aaKnown RBP17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 ABCF3Q9NUQ8 709 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 NINJ2Q9NZG7 142 aa17.55■□□□□ 0.4
SEMA3B-207ENST00000441915 MAFGO15525 162 aa17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 OAS1P00973 400 aaKnown RBP17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 SLC8A1P32418 973 aa17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 RTP1P59025 263 aa17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 DAB2IPQ5VWQ8 1189 aa17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 LMBRD2Q68DH5 695 aaPredicted RBP17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 MON1BQ7L1V2 547 aa17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 RTKN2Q8IZC4 609 aa17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 CCDC77Q9BR77 488 aa17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 TACO1Q9BSH4 297 aaKnown RBP17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 CFAP73A6NFT4 308 aa17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 EXTL3O43909 919 aa17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 CDH16O75309 829 aa17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 POTEJP0CG39 1038 aa17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 LIG4P49917 911 aa17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 ZACNQ401N2 412 aa17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 WLSQ5T9L3 541 aa17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 XRRA1Q6P2D8 792 aa17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 GPRASP2Q96D09 838 aa17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 C11orf70Q9BRQ4 267 aa17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 MLXIPLQ9NP71 852 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms