RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 DTNBP1Q96EV8 351 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 ZSWIM1Q9BR11 485 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 PCIF1Q9H4Z3 704 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 UBE2TQ9NPD8 197 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-214ENST00000441542 PPARGC1AQ9UBK2 798 aaKnown RBP7.98□□□□□ -1.13
HDAC9-214ENST00000441542 PHF24Q9UPV7 400 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.98□□□□□ -1.13
HDAC9-214ENST00000441542 HEMK1Q9Y5R4 338 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-214ENST00000441542 USP17L5A8MUK1 530 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 CYP26A1O43174 497 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 CHMP2AO43633 222 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 CCDC22O60826 627 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 CDH16O75309 829 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 PARNO95453 639 aaKnown RBP7.98□□□□□ -1.13
HDAC9-214ENST00000441542 STARD3NLO95772 234 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 NMT1P30419 496 aaKnown RBP7.98□□□□□ -1.13
HDAC9-214ENST00000441542 CCR3P51677 355 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 ARFIP2P53365 341 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 PDIA5Q14554 519 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 IZUMO3Q5VZ72 239 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 TRMT10CQ7L0Y3 403 aaKnown RBP7.98□□□□□ -1.13
HDAC9-214ENST00000441542 ALYREFQ86V81 257 aaKnown RBP7.98□□□□□ -1.13
HDAC9-214ENST00000441542 TTC30BQ8N4P2 665 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 ENDOVQ8N8Q3 282 aaKnown RBP7.98□□□□□ -1.13
HDAC9-214ENST00000441542 ZNF512BQ96KM6 892 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-214ENST00000441542 BTBD10Q9BSF8 475 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 RUSC1Q9BVN2 902 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 TIPINQ9BVW5 301 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 SYNCQ9H7C4 482 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 CYP4F11Q9HBI6 524 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 R3HDM2Q9Y2K5 976 aaKnown RBP7.98□□□□□ -1.13
HDAC9-214ENST00000441542 AK5Q9Y6K8 562 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 SYNGAP1Q96PV0 1343 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 E7ENQ6 273 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 CIB2O75838 187 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 LMNAP02545 664 aaKnown RBP7.97□□□□□ -1.13
HDAC9-214ENST00000441542 ITGA2BP08514 1039 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 TMEM253P0C7T8 217 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 TAL1P17542 331 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-214ENST00000441542 KRT4P19013 534 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 RRM1P23921 792 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 SKIV2L2P42285 1042 aaKnown RBP7.97□□□□□ -1.13
HDAC9-214ENST00000441542 YARSP54577 528 aaKnown RBP7.97□□□□□ -1.13
HDAC9-214ENST00000441542 IRX4P78413 519 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 DSG1Q02413 1049 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 EFTUD2Q15029 972 aaKnown RBP eCLIP7.97□□□□□ -1.13
HDAC9-214ENST00000441542 EPHA7Q15375 998 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 CAVIN4Q5BKX8 364 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 SUSD4Q5VX71 490 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 MFSD5Q6N075 450 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 PAOXQ6QHF9 649 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 RAPH1Q70E73 1250 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 C11orf96Q7Z7L8 435 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 FAM186BQ8IYM0 893 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 ARHGAP18Q8N392 663 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 SLC26A7Q8TE54 656 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 C10orf82Q8WW14 230 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 INPP5DQ92835 1189 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 ZNF653Q96CK0 615 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 IFT43Q96FT9 208 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 FAM84AQ96KN4 292 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 RBM15Q96T37 977 aaKnown RBP eCLIP7.97□□□□□ -1.13
HDAC9-214ENST00000441542 ROPN1BQ9BZX4 212 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-214ENST00000441542 ROPN1Q9HAT0 212 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-214ENST00000441542 PPM1HQ9ULR3 514 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 DOLKQ9UPQ8 538 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 PCDHGA4Q9Y5G9 962 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 C5P01031 1676 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 M0R2N6 131 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 EDF1O60869 148 aaKnown RBP7.97□□□□□ -1.13
HDAC9-214ENST00000441542 TBCAO75347 108 aaKnown RBP7.97□□□□□ -1.13
HDAC9-214ENST00000441542 ETS1P14921 441 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 SERPINB6P35237 376 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 ADCY7P51828 1080 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 SNAP25P60880 206 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 PLCB3Q01970 1234 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 AP1B1Q10567 949 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 GRM4Q14833 912 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 SMAD1Q15797 465 aaKnown RBP7.97□□□□□ -1.13
HDAC9-214ENST00000441542 C4orf46Q504U0 113 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 GJC2Q5T442 439 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-214ENST00000441542 USP17L6PQ6QN14 398 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 SMIM5Q71RC9 77 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 MARK2Q7KZI7 788 aaKnown RBP7.97□□□□□ -1.13
HDAC9-214ENST00000441542 SDCCAG8Q86SQ7 713 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-214ENST00000441542 NAT14Q8WUY8 206 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 ZNF75CPQ92670 426 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-214ENST00000441542 GATA6Q92908 595 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 GRAMD1AQ96CP6 724 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 NSL1Q96IY1 281 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 ANKRD27Q96NW4 1050 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 SIKE1Q9BRV8 207 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 NUP85Q9BW27 656 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 TAS2R1Q9NYW7 299 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 TRAF3IP3Q9Y228 551 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 EP400Q96L91 3159 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 SIGLEC16A6NMB1 481 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 USP17L15C9J2P7 530 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 USP17L13C9JLJ4 530 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 BHMG1C9JSJ3 638 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms