RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 SLKQ9H2G2 1235 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-206ENST00000441089 SMOC2Q9H3U7 446 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 RNF146Q9NTX7 359 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 FEM1BQ9UK73 627 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 GMEB2Q9UKD1 530 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 SMG5Q9UPR3 1016 aaKnown RBP5.45□□□□□ -1.54
PTPN4-206ENST00000441089 PCDHGA2Q9Y5H1 932 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 ANKRD17O75179 2603 aaKnown RBP5.45□□□□□ -1.54
PTPN4-206ENST00000441089 F5P12259 2224 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 PATJQ8NI35 1801 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 DENND4AQ7Z401 1863 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 APC2O95996 2303 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 GREB1LQ9C091 1923 aaPredicted RBP5.44□□□□□ -1.54
PTPN4-206ENST00000441089 A0A1W2PP55 124 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 GOLGA8AA7E2F4 631 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 B4DLN1 442 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.44□□□□□ -1.54
PTPN4-206ENST00000441089 F5H6K3 240 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 TBC1D4O60343 1298 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 LRP3O75074 770 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 CAND2O75155 1236 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 FDPSP14324 419 aaKnown RBP5.44□□□□□ -1.54
PTPN4-206ENST00000441089 THPOP40225 353 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 MRPL12P52815 198 aaKnown RBP5.44□□□□□ -1.54
PTPN4-206ENST00000441089 RING1Q06587 406 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 KLRC3Q07444 240 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 TROAPQ12815 778 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 PKP1Q13835 747 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 SART3Q15020 963 aaKnown RBP5.44□□□□□ -1.54
PTPN4-206ENST00000441089 NTRK3Q16288 839 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 IFIT1BQ5T764 474 aaKnown RBP5.44□□□□□ -1.54
PTPN4-206ENST00000441089 SYCE2Q6PIF2 218 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 PRR23BQ6ZRT6 265 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 MICU3Q86XE3 530 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 IQCA1Q86XH1 822 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 KSR1Q8IVT5 923 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 SMARCC2Q8TAQ2 1214 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 ACSF2Q96CM8 615 aaPredicted RBP5.44□□□□□ -1.54
PTPN4-206ENST00000441089 INTS4Q96HW7 963 aaKnown RBP5.44□□□□□ -1.54
PTPN4-206ENST00000441089 NUP88Q99567 741 aaPredicted RBP5.44□□□□□ -1.54
PTPN4-206ENST00000441089 EPC1Q9H2F5 836 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 ZNF287Q9HBT7 754 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 CYP26B1Q9NR63 512 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 MTMR4Q9NYA4 1195 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 CYP39A1Q9NYL5 469 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 CRIM1Q9NZV1 1036 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 HDAC6Q9UBN7 1215 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 WNT16Q9UBV4 365 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 FBXO4Q9UKT5 387 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 NAP1L2Q9ULW6 460 aaPredicted RBP5.44□□□□□ -1.54
PTPN4-206ENST00000441089 DUSP12Q9UNI6 340 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 GREB1Q4ZG55 1949 aa5.44□□□□□ -1.54
PTPN4-206ENST00000441089 LOXHD1Q8IVV2 1947 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 A0A096LPE4 126 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-206ENST00000441089 A0A1W2PPZ6 126 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 ERICH2A1L162 156 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 PTPDC1A2A3K4 754 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 ZNF503-AS2A6NEH8 195 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 CCDC69A6NI79 296 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 BIN1O00499 593 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 PER2O15055 1255 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 ZBTB43O43298 467 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 DDAH1O94760 285 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 PLEKHA8P1O95397 391 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 TXNP10599 105 aaKnown RBP5.43□□□□□ -1.54
PTPN4-206ENST00000441089 TOP1P11387 765 aaKnown RBP5.43□□□□□ -1.54
PTPN4-206ENST00000441089 ALAS1P13196 640 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 TGM1P22735 817 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 GJB2P29033 226 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 METAP2P50579 478 aaKnown RBP eCLIP5.43□□□□□ -1.54
PTPN4-206ENST00000441089 ALDH5A1P51649 535 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-206ENST00000441089 RCAN1P53805 252 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 CDK5R2Q13319 367 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 MAP7Q14244 749 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 GRM4Q14833 912 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 NONOQ15233 471 aaKnown RBP eCLIP5.43□□□□□ -1.54
PTPN4-206ENST00000441089 DGKDQ16760 1214 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 N4BP2L1Q5TBK1 243 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-206ENST00000441089 IL31Q6EBC2 164 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 SERINC5Q86VE9 423 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 DHX37Q8IY37 1157 aaKnown RBP5.43□□□□□ -1.54
PTPN4-206ENST00000441089 CMTR2Q8IYT2 770 aaKnown RBP5.43□□□□□ -1.54
PTPN4-206ENST00000441089 TMTC2Q8N394 836 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 SRBD1Q8N5C6 995 aaKnown RBP5.43□□□□□ -1.54
PTPN4-206ENST00000441089 FANCBQ8NB91 859 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 VN1R2Q8NFZ6 395 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 TMEM40Q8WWA1 233 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 KAT2BQ92831 832 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 CASP10Q92851 521 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 CHMP4CQ96CF2 233 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 ZNF689Q96CS4 500 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-206ENST00000441089 TCF12Q99081 682 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 YIPF2Q9BWQ6 316 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 ADAM7Q9H2U9 754 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 CLEC4MQ9H2X3 399 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-206ENST00000441089 POMKQ9H5K3 350 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 KAT14Q9H8E8 782 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 LIN7BQ9HAP6 207 aa5.43□□□□□ -1.54
PTPN4-206ENST00000441089 PRDM7Q9NQW5 492 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms