RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 DPP9Q86TI2 863 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 NOP9Q86U38 636 aaKnown RBP15.15■□□□□ 0.02
LIMD1-202ENST00000440097 FAM71AQ8IYT1 594 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 HELQQ8TDG4 1101 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 TCP11Q8WWU5 503 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 N4BP2L2Q92802 583 aaPredicted RBP15.15■□□□□ 0.02
LIMD1-202ENST00000440097 ARHGEF26Q96DR7 871 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 CYFIP2Q96F07 1278 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 CCDC114Q96M63 670 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 HAPLN2Q9GZV7 340 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 SMARCAD1Q9H4L7 1026 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 NMRK2Q9NPI5 230 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 SUCLA2Q9P2R7 463 aaPredicted RBP15.15■□□□□ 0.02
LIMD1-202ENST00000440097 NENFQ9UMX5 172 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 PLAAQ9Y263 795 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 COQ4Q9Y3A0 265 aa15.15■□□□□ 0.02
LIMD1-202ENST00000440097 A0A0A6YYK5 440 aaPredicted RBP15.14■□□□□ 0.01
LIMD1-202ENST00000440097 INO80B-WBP1J3KQ70 363 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 GRIN3BO60391 1043 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 BUB1BO60566 1050 aaPredicted RBP15.14■□□□□ 0.01
LIMD1-202ENST00000440097 MMEP08473 750 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 CDR1P51861 262 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 WNT7BP56706 349 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 PSMD6Q15008 389 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 MAPK6Q16659 721 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 CCDC62Q6P9F0 684 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 CCDC121Q6ZUS5 278 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 LRRC57Q8N9N7 239 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 SHC3Q92529 594 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 ZNF516Q92618 1163 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 PPP1R16BQ96T49 567 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 KRT12Q99456 494 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 SYT11Q9BT88 431 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 INO80BQ9C086 356 aaPredicted RBP15.14■□□□□ 0.01
LIMD1-202ENST00000440097 RNF14Q9UBS8 474 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 GGA2Q9UJY4 613 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 TTLL13PA6NNM8 815 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 TMEM110-MUSTN1A8MSY1 372 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 EDN1P05305 212 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 CLCN3P51790 818 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 EFNA5P52803 228 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 MXD4Q14582 209 aaPredicted RBP15.14■□□□□ 0.01
LIMD1-202ENST00000440097 SHCBP1Q8NEM2 672 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 MRPL4Q9BYD3 311 aaKnown RBP15.14■□□□□ 0.01
LIMD1-202ENST00000440097 GBA2Q9HCG7 927 aaPredicted RBP15.14■□□□□ 0.01
LIMD1-202ENST00000440097 AMFRQ9UKV5 643 aa15.14■□□□□ 0.01
LIMD1-202ENST00000440097 KIAA0391O15091 583 aaKnown RBP15.13■□□□□ 0.01
LIMD1-202ENST00000440097 HLA-DRAP01903 254 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 MYCNP04198 464 aaPredicted RBP15.13■□□□□ 0.01
LIMD1-202ENST00000440097 CYP11B1P15538 503 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 SPRED3Q2MJR0 410 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 SPOPLQ6IQ16 392 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 PLPPR4Q7Z2D5 763 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 A0A0B4J269 797 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 ATMINO43313 823 aaPredicted RBP15.13■□□□□ 0.01
LIMD1-202ENST00000440097 CELF2O95319 508 aaKnown RBP15.13■□□□□ 0.01
LIMD1-202ENST00000440097 CALCAP01258 141 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 PRKCBP05771 671 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 OSTNP61366 133 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 WLSQ5T9L3 541 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 TDRD10Q5VZ19 366 aaKnown RBP15.13■□□□□ 0.01
LIMD1-202ENST00000440097 EFCAB12Q6NXP0 572 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 CRELD2Q6UXH1 353 aaPredicted RBP15.13■□□□□ 0.01
LIMD1-202ENST00000440097 CDR2LQ86X02 465 aaPredicted RBP15.13■□□□□ 0.01
LIMD1-202ENST00000440097 C2orf69Q8N8R5 385 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 GTF3C2Q8WUA4 911 aaPredicted RBP15.13■□□□□ 0.01
LIMD1-202ENST00000440097 BRI3BPQ8WY22 251 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 TMEM134Q9H6X4 195 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 ERAP1Q9NZ08 941 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 PTPRJQ12913 1337 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 CLGNO14967 610 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 SNCBQ16143 134 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 CEP57Q86XR8 500 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 KLHL7Q8IXQ5 586 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 WHAMMQ8TF30 809 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 TMBIM4Q9HC24 238 aa15.13■□□□□ 0.01
LIMD1-202ENST00000440097 DDX20Q9UHI6 824 aaKnown RBP15.13■□□□□ 0.01
LIMD1-202ENST00000440097 LGR5O75473 907 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 TNFSF9P41273 254 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 ZACNQ401N2 412 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 PARP9Q8IXQ6 854 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 EXOC8Q8IYI6 725 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 C1orf131Q8NDD1 294 aaKnown RBP15.12■□□□□ 0.01
LIMD1-202ENST00000440097 MS4A4AQ96JQ5 239 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 PCDHB18PQ96TA0 734 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 RNPEPQ9H4A4 650 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 NOCTQ9UK39 431 aaKnown RBP15.12■□□□□ 0.01
LIMD1-202ENST00000440097 STYXL1Q9Y6J8 313 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 GOLGA6L7A0A1B0GV03 622 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 DNM1LO00429 736 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 GAS2O43903 313 aaKnown RBP15.12■□□□□ 0.01
LIMD1-202ENST00000440097 HBP1O60381 514 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 RTN2O75298 545 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 TOM1L1O75674 476 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 PIGRP01833 764 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 ADCYAP1R1P41586 468 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 SLC26A2P50443 739 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 GPC5P78333 572 aa15.12■□□□□ 0.01
LIMD1-202ENST00000440097 MKRN4PQ13434 485 aaPredicted RBP15.12■□□□□ 0.01
LIMD1-202ENST00000440097 CYB5D1Q6P9G0 228 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms