RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 CD302Q8IX05 232 aa21.15■□□□□ 0.98
APTR-204ENST00000440088 APOBEC3GQ9HC16 384 aaKnown RBP21.15■□□□□ 0.98
APTR-204ENST00000440088 TRPV2Q9Y5S1 764 aa21.15■□□□□ 0.98
APTR-204ENST00000440088 CDY2AQ9Y6F7 541 aa21.15■□□□□ 0.98
APTR-204ENST00000440088 DUSP10Q9Y6W6 482 aa21.15■□□□□ 0.98
APTR-204ENST00000440088 DDX3XO00571 662 aaKnown RBP eCLIP21.14■□□□□ 0.987e-9■■■■□ 20
APTR-204ENST00000440088 FANCGO15287 622 aa21.14■□□□□ 0.98
APTR-204ENST00000440088 MEFVO15553 781 aaPredicted RBP21.14■□□□□ 0.98
APTR-204ENST00000440088 NFICP08651 508 aa21.14■□□□□ 0.98
APTR-204ENST00000440088 CUL2Q13617 745 aa21.14■□□□□ 0.98
APTR-204ENST00000440088 GLYCTKQ8IVS8 523 aa21.14■□□□□ 0.98
APTR-204ENST00000440088 GLT1D1Q96MS3 346 aa21.14■□□□□ 0.98
APTR-204ENST00000440088 TSEN34Q9BSV6 310 aaKnown RBP21.14■□□□□ 0.98
APTR-204ENST00000440088 EIF2AQ9BY44 585 aaKnown RBP21.14■□□□□ 0.98
APTR-204ENST00000440088 CYP26A1O43174 497 aa21.14■□□□□ 0.97
APTR-204ENST00000440088 MYL6P60660 151 aa21.14■□□□□ 0.97
APTR-204ENST00000440088 NT5DC4Q86YG4 428 aa21.14■□□□□ 0.97
APTR-204ENST00000440088 SLC30A5Q8TAD4 765 aa21.14■□□□□ 0.97
APTR-204ENST00000440088 DHX38Q92620 1227 aaKnown RBP21.14■□□□□ 0.97
APTR-204ENST00000440088 ARID3AQ99856 593 aa21.14■□□□□ 0.97
APTR-204ENST00000440088 AGPAT1Q99943 283 aa21.14■□□□□ 0.97
APTR-204ENST00000440088 C2CD2Q9Y426 696 aa21.14■□□□□ 0.97
APTR-204ENST00000440088 NUB1Q9Y5A7 615 aa21.14■□□□□ 0.97
APTR-204ENST00000440088 MACROD2A1Z1Q3 448 aa21.13■□□□□ 0.97
APTR-204ENST00000440088 TNFAIP3P21580 790 aa21.13■□□□□ 0.97
APTR-204ENST00000440088 PTPN11Q06124 597 aaPredicted RBP21.13■□□□□ 0.97
APTR-204ENST00000440088 TMEM132DQ14C87 1099 aa21.13■□□□□ 0.97
APTR-204ENST00000440088 SLC35F6Q8N357 371 aa21.13■□□□□ 0.97
APTR-204ENST00000440088 LNX1Q8TBB1 728 aaPredicted RBP21.13■□□□□ 0.97
APTR-204ENST00000440088 EPS8L1Q8TE68 723 aa21.13■□□□□ 0.97
APTR-204ENST00000440088 SECISBP2LQ93073 1101 aaKnown RBP21.13■□□□□ 0.97
APTR-204ENST00000440088 WNT8BQ93098 351 aa21.13■□□□□ 0.97
APTR-204ENST00000440088 PLEKHA5Q9HAU0 1116 aa21.13■□□□□ 0.97
APTR-204ENST00000440088 NENFQ9UMX5 172 aa21.13■□□□□ 0.97
APTR-204ENST00000440088 SGPL1O95470 568 aa21.12■□□□□ 0.97
APTR-204ENST00000440088 KRT5P13647 590 aa21.12■□□□□ 0.97
APTR-204ENST00000440088 YARSP54577 528 aaKnown RBP21.12■□□□□ 0.97
APTR-204ENST00000440088 FAM228AQ86W67 206 aa21.12■□□□□ 0.97
APTR-204ENST00000440088 OLIG1Q8TAK6 271 aa21.12■□□□□ 0.97
APTR-204ENST00000440088 SENP6Q9GZR1 1112 aaPredicted RBP21.12■□□□□ 0.97
APTR-204ENST00000440088 SNTG2Q9NY99 539 aa21.12■□□□□ 0.97
APTR-204ENST00000440088 NOC2LQ9Y3T9 749 aaKnown RBP21.12■□□□□ 0.97
APTR-204ENST00000440088 ATP8B3O60423 1300 aa21.12■□□□□ 0.97
APTR-204ENST00000440088 CTSHP09668 335 aa21.12■□□□□ 0.97
APTR-204ENST00000440088 PDE6CP51160 858 aa21.12■□□□□ 0.97
APTR-204ENST00000440088 ZNF699Q32M78 642 aa21.12■□□□□ 0.97
APTR-204ENST00000440088 SCARA3Q6AZY7 606 aa21.12■□□□□ 0.97
APTR-204ENST00000440088 SLC47A2Q86VL8 602 aa21.12■□□□□ 0.97
APTR-204ENST00000440088 C1orf127Q8N9H9 656 aa21.12■□□□□ 0.97
APTR-204ENST00000440088 ARRDC4Q8NCT1 418 aa21.12■□□□□ 0.97
APTR-204ENST00000440088 U2AF1L4Q8WU68 220 aaKnown RBP21.12■□□□□ 0.97
APTR-204ENST00000440088 SEPT11Q9NVA2 429 aaKnown RBP21.12■□□□□ 0.97
APTR-204ENST00000440088 NOD1Q9Y239 953 aa21.12■□□□□ 0.97
APTR-204ENST00000440088 RPS6KA5O75582 802 aa21.11■□□□□ 0.97
APTR-204ENST00000440088 KRT19P08727 400 aa21.11■□□□□ 0.97
APTR-204ENST00000440088 CYP11B1P15538 503 aa21.11■□□□□ 0.97
APTR-204ENST00000440088 SLC20A1Q8WUM9 679 aa21.11■□□□□ 0.97
APTR-204ENST00000440088 TAF4BQ92750 862 aa21.11■□□□□ 0.97
APTR-204ENST00000440088 NIF3L1Q9GZT8 377 aa21.11■□□□□ 0.97
APTR-204ENST00000440088 NOCTQ9UK39 431 aaKnown RBP21.11■□□□□ 0.97
APTR-204ENST00000440088 UMODL1Q5DID0 1318 aa21.11■□□□□ 0.97
APTR-204ENST00000440088 CHRNA1P02708 482 aa21.11■□□□□ 0.97
APTR-204ENST00000440088 THPOP40225 353 aa21.11■□□□□ 0.97
APTR-204ENST00000440088 PTK7Q13308 1070 aa21.11■□□□□ 0.97
APTR-204ENST00000440088 NOP9Q86U38 636 aaKnown RBP21.11■□□□□ 0.97
APTR-204ENST00000440088 SH3TC2Q8TF17 1288 aa21.11■□□□□ 0.97
APTR-204ENST00000440088 PACSIN1Q9BY11 444 aa21.11■□□□□ 0.97
APTR-204ENST00000440088 XYLT2Q9H1B5 865 aa21.11■□□□□ 0.97
APTR-204ENST00000440088 NXF3Q9H4D5 531 aaKnown RBP21.11■□□□□ 0.97
APTR-204ENST00000440088 SIX4Q9UIU6 781 aa21.11■□□□□ 0.97
APTR-204ENST00000440088 INTUQ9ULD6 942 aa21.11■□□□□ 0.97
APTR-204ENST00000440088 HES2Q9Y543 173 aa21.11■□□□□ 0.97
APTR-204ENST00000440088 FRMPD3Q5JV73 1810 aa21.1■□□□□ 0.97
APTR-204ENST00000440088 RALGAPA2Q2PPJ7 1873 aa21.1■□□□□ 0.97
APTR-204ENST00000440088 CTAGE9A4FU28 777 aa21.1■□□□□ 0.97
APTR-204ENST00000440088 RIOK3O14730 519 aaKnown RBP21.1■□□□□ 0.97
APTR-204ENST00000440088 ITGB3P05106 788 aa21.1■□□□□ 0.97
APTR-204ENST00000440088 ACO1P21399 889 aaKnown RBP21.1■□□□□ 0.97
APTR-204ENST00000440088 TERF1P54274 439 aa21.1■□□□□ 0.97
APTR-204ENST00000440088 BPIFB4P59827 614 aa21.1■□□□□ 0.97
APTR-204ENST00000440088 MGAT3Q09327 533 aa21.1■□□□□ 0.97
APTR-204ENST00000440088 RPUSD2Q8IZ73 545 aaKnown RBP21.1■□□□□ 0.97
APTR-204ENST00000440088 RNF10Q8N5U6 811 aaKnown RBP21.1■□□□□ 0.97
APTR-204ENST00000440088 TRIM58Q8NG06 486 aa21.1■□□□□ 0.97
APTR-204ENST00000440088 KIF12Q96FN5 646 aa21.1■□□□□ 0.97
APTR-204ENST00000440088 SNX27Q96L92 541 aa21.1■□□□□ 0.97
APTR-204ENST00000440088 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.1■□□□□ 0.97
APTR-204ENST00000440088 DERAQ9Y315 318 aa21.1■□□□□ 0.97
APTR-204ENST00000440088 URI1O94763 535 aaPredicted RBP21.09■□□□□ 0.97
APTR-204ENST00000440088 H2AFZP0C0S5 128 aa21.09■□□□□ 0.97
APTR-204ENST00000440088 UBXN11Q5T124 520 aa21.09■□□□□ 0.97
APTR-204ENST00000440088 TWF2Q6IBS0 349 aaKnown RBP21.09■□□□□ 0.97
APTR-204ENST00000440088 H2AFVQ71UI9 128 aa21.09■□□□□ 0.97
APTR-204ENST00000440088 ACP6Q9NPH0 428 aa21.09■□□□□ 0.97
APTR-204ENST00000440088 TRMT13Q9NUP7 481 aaKnown RBP21.09■□□□□ 0.97
APTR-204ENST00000440088 ITGA11Q9UKX5 1188 aa21.09■□□□□ 0.97
APTR-204ENST00000440088 ST3GAL5Q9UNP4 418 aa21.09■□□□□ 0.97
APTR-204ENST00000440088 PCDHB4Q9Y5E5 795 aa21.09■□□□□ 0.97
APTR-204ENST00000440088 PCDHB2Q9Y5E7 798 aa21.09■□□□□ 0.97
APTR-204ENST00000440088 TACC1O75410 805 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms