RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 GOLGA8FQ08AF8 430 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 GOLGA8DPQ0D2H9 430 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 COASYQ13057 564 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 PPP2R5CQ13362 524 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 ALCAMQ13740 583 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 SMC1AQ14683 1233 aaKnown RBP5.14□□□□□ -1.59
EDEM3-203ENST00000439962 ZNF484Q5JVG2 852 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 LLGL2Q6P1M3 1020 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 TSHZ1Q6ZSZ6 1077 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 STXBP4Q6ZWJ1 553 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 NIPA1Q7RTP0 329 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 TRIM59Q8IWR1 403 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 SYT2Q8N9I0 419 aaPredicted RBP5.14□□□□□ -1.59
EDEM3-203ENST00000439962 ACRBPQ8NEB7 543 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 CPLX3Q8WVH0 158 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 DDX12PQ92771 950 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 HPS3Q969F9 1004 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 FAM84AQ96KN4 292 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 MKNK1Q9BUB5 465 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 RUSC1Q9BVN2 902 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 EIF2AQ9BY44 585 aaKnown RBP5.14□□□□□ -1.59
EDEM3-203ENST00000439962 TSPYL1Q9H0U9 437 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 RNF39Q9H2S5 420 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 OLFML3Q9NRN5 406 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 CDH22Q9UJ99 828 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 SNX12Q9UMY4 172 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 HYOU1Q9Y4L1 999 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 IGKV6D-21A0A0A0MT36 114 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 A0A0A6YYK5 440 aaPredicted RBP5.14□□□□□ -1.59
EDEM3-203ENST00000439962 SMIM35A0A1B0GVV1 85 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 LINC01553A4QN01 128 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 SLC16A4O15374 487 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 CALUO43852 315 aaPredicted RBP5.14□□□□□ -1.59
EDEM3-203ENST00000439962 MAPTP10636 758 aaKnown RBP5.14□□□□□ -1.59
EDEM3-203ENST00000439962 RPL13P26373 211 aaKnown RBP5.14□□□□□ -1.59
EDEM3-203ENST00000439962 MCM6Q14566 821 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 EPM2AIP1Q7L775 607 aaPredicted RBP5.14□□□□□ -1.59
EDEM3-203ENST00000439962 THNSL1Q8IYQ7 743 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 LRRN4CLQ8ND94 238 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 GOLGA5Q8TBA6 731 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 LRRC15Q8TF66 581 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 BSNDQ8WZ55 320 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 BAP1Q92560 729 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 EEF2KMTQ96G04 330 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 FAM167AQ96KS9 214 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 HSD17B14Q9BPX1 270 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 TIPINQ9BVW5 301 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 GCOM2Q9BZD3 368 aaPredicted RBP5.14□□□□□ -1.59
EDEM3-203ENST00000439962 CXCL16Q9H2A7 254 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 XPNPEP1Q9NQW7 623 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 TYW1Q9NV66 732 aaKnown RBP5.14□□□□□ -1.59
EDEM3-203ENST00000439962 PANK4Q9NVE7 773 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.14□□□□□ -1.59
EDEM3-203ENST00000439962 DNM3Q9UQ16 869 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 ABHD14A-ACY1A0A1B0GW23 586 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 WEE2P0C1S8 567 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 SCP2P22307 547 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 KCNA5P22460 613 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 PRKCIP41743 596 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 SLC26A2P50443 739 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 KIF11P52732 1056 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 SLC12A3P55017 1021 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 NKX3-2P78367 333 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 PTPN11Q06124 597 aaPredicted RBP5.13□□□□□ -1.59
EDEM3-203ENST00000439962 HSP90AA4PQ58FG1 418 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 FIBCD1Q8N539 461 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 CEP120Q8N960 986 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 TOP1MTQ969P6 601 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 BICD1Q96G01 975 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 RAD9AQ99638 391 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 CHP1Q99653 195 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 KCTD10Q9H3F6 313 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 NXF3Q9H4D5 531 aaKnown RBP5.13□□□□□ -1.59
EDEM3-203ENST00000439962 ATP6V0A4Q9HBG4 840 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.13□□□□□ -1.594e-7■■■■■ 57.7
EDEM3-203ENST00000439962 CWC15Q9P013 229 aaKnown RBP5.13□□□□□ -1.59
EDEM3-203ENST00000439962 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.13□□□□□ -1.59
EDEM3-203ENST00000439962 INSL6Q9Y581 213 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 PCDHA13Q9Y5I0 950 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 SRRM3A6NNA2 597 aaPredicted RBP5.13□□□□□ -1.59
EDEM3-203ENST00000439962 TISP43B9A030 160 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 RNF225M0QZC1 329 aaPredicted RBP5.13□□□□□ -1.59
EDEM3-203ENST00000439962 CETN3O15182 167 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 GPR182O15218 404 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 MAPK13O15264 365 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 MAGEB2O15479 319 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 HIP1RO75146 1068 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 STBD1O95210 358 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 NPTXRO95502 500 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 EYA4O95677 639 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 IVLP07476 585 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 CCDC172P0C7W6 258 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 PLA2G4BP0C869 781 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 SPATA31D3P0C874 917 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 DARSP14868 501 aaKnown RBP5.13□□□□□ -1.59
EDEM3-203ENST00000439962 GLRA2P23416 452 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 IRS1P35568 1242 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 MLH1P40692 756 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 KCNQ1P51787 676 aa5.13□□□□□ -1.59
EDEM3-203ENST00000439962 CAPSQ13938 189 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms