RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 CD58P19256 250 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 KDSRQ06136 332 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 CLUL1Q15846 466 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 P3H1Q32P28 736 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.39□□□□□ -0.43
SMPD4-209ENST00000439886 RNF43Q68DV7 783 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 PHLDB3Q6NSJ2 640 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 ASRGL1Q7L266 308 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 ZBED8Q8IZ13 594 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 SYT2Q8N9I0 419 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-209ENST00000439886 WDR66Q8TBY9 1149 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 OPTNQ96CV9 577 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 TMEM98Q9Y2Y6 226 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 NDUFB5O43674 189 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 GSTT1P30711 240 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 MAGEA4P43358 317 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 C14orf80Q86SX3 495 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 IQCF2Q8IXL9 164 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 ASAP3Q8TDY4 903 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 PCMTD2Q9NV79 361 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 TJP1Q07157 1748 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 ASTN1O14525 1302 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 SIPA1L3O60292 1781 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-209ENST00000439886 C6orf229H3BNL8 230 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 FAM200BP0CF97 657 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 ITIH2P19823 946 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 DRG2P55039 364 aaKnown RBP12.39□□□□□ -0.43
SMPD4-209ENST00000439886 CBX3Q13185 183 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 MTMR2Q13614 643 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 ARHGEF19Q8IW93 802 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 SNRNP27Q8WVK2 155 aaKnown RBP12.39□□□□□ -0.43
SMPD4-209ENST00000439886 WNT8AQ9H1J5 351 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 FBXO6Q9NRD1 293 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-209ENST00000439886 PCYOX1Q9UHG3 505 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 KIF1AQ12756 1690 aa12.39□□□□□ -0.43
SMPD4-209ENST00000439886 A0A1W2PPM1 405 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 K7ENM7 598 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 RIMBP2O15034 1052 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 BANF1O75531 89 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 CAMTA2O94983 1202 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 ENO1P06733 434 aaKnown RBP12.38□□□□□ -0.43
SMPD4-209ENST00000439886 ZSCAN5DPP0CG00 497 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 NAT2P11245 290 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 PGM1P36871 562 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 DLG4P78352 724 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 LRRC74BQ6ZQY2 392 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 SLC47A2Q86VL8 602 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 PASD1Q8IV76 773 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 FAM84AQ96KN4 292 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 RILPQ96NA2 401 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 SETDB2Q96T68 719 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 LRMDAQ9H2I8 198 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 CCDC134Q9H6E4 229 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 SMYD3Q9H7B4 428 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 MARCOQ9UEW3 520 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-209ENST00000439886 LNPEPQ9UIQ6 1025 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 PCDHA2Q9Y5H9 948 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 WASF2Q9Y6W5 498 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 G3V3G9 751 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 LIN7AO14910 233 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-209ENST00000439886 CIB2O75838 187 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 BMP3P12645 472 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 KRT4P19013 534 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 RRM1P23921 792 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 PTPN4P29074 926 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 HOXD13P35453 343 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 SLC12A3P55017 1021 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 ARHGAP4P98171 946 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 TCP10Q12799 353 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 CERKLQ49MI3 558 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-209ENST00000439886 DCAF8Q5TAQ9 597 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 CYFIP1Q7L576 1253 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.38□□□□□ -0.433e-6■■■■■ 34.1
SMPD4-209ENST00000439886 CXorf38Q8TB03 319 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 TCHPQ9BT92 498 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 TRAF3IP3Q9Y228 551 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 LRRC42Q9Y546 428 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 LOC102724428A0A0B4J2F2 783 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 ARFIP2P53365 341 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 SIK1P57059 783 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 JAM2P57087 298 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 DYNLT1P63172 113 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 SLC1A5Q15758 541 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 SPDYCQ5MJ68 293 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 MFSD14BQ5SR56 506 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 SLF2Q8IX21 1173 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 ACSF2Q96CM8 615 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-209ENST00000439886 NMD3Q96D46 503 aaKnown RBP12.38□□□□□ -0.43
SMPD4-209ENST00000439886 MOV10L1Q9BXT6 1211 aaKnown RBP12.38□□□□□ -0.43
SMPD4-209ENST00000439886 ANKRD2Q9GZV1 360 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 PARVGQ9HBI0 331 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 WDR35Q9P2L0 1181 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 R3HDM2Q9Y2K5 976 aaKnown RBP12.38□□□□□ -0.43
SMPD4-209ENST00000439886 LRCH1Q9Y2L9 728 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.38□□□□□ -0.43
SMPD4-209ENST00000439886 IKBKGQ9Y6K9 419 aa12.38□□□□□ -0.43
SMPD4-209ENST00000439886 H3BRJ5 948 aa12.37□□□□□ -0.43
SMPD4-209ENST00000439886 CFBP00751 764 aa12.37□□□□□ -0.43
SMPD4-209ENST00000439886 OAS1P00973 400 aaKnown RBP12.37□□□□□ -0.43
SMPD4-209ENST00000439886 RALAP11233 206 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms