RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 PSMC4P43686 418 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 LIG4P49917 911 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 FXR1P51114 621 aaKnown RBP eCLIP4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 VAMP7P51809 220 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 KRT83P78385 493 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 LAMTOR4Q0VGL1 99 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 SNRNP35Q16560 246 aaKnown RBP4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 EXOC3L4Q17RC7 722 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 DCAF17Q5H9S7 520 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 RNFT1Q5M7Z0 435 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 TCERG1LQ5VWI1 586 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 EFCAB12Q6NXP0 572 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 ZPBP2Q6X784 338 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 APBB1IPQ7Z5R6 666 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 CCDC170Q8IYT3 715 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 METTL13Q8N6R0 699 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 NPLOC4Q8TAT6 608 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 ASAP3Q8TDY4 903 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 BSNDQ8WZ55 320 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 POMGNT1Q8WZA1 660 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 EDEM1Q92611 657 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 COPS5Q92905 334 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 SLC35C1Q96A29 364 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 BORCS6Q96GS4 357 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 CAPNS2Q96L46 248 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 FAM81BQ96LP2 452 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 MFSD14AQ96MC6 490 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 FBXL18Q96ME1 805 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 MAP7D2Q96T17 732 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 C16orf70Q9BSU1 422 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 KATNAL1Q9BW62 490 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 MRPL4Q9BYD3 311 aaKnown RBP4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 NFKBIZQ9BYH8 718 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 TTYH3Q9C0H2 523 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 SUGCTQ9HAC7 445 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 SPC25Q9HBM1 224 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 LUC7LQ9NQ29 371 aaKnown RBP4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 FAM207AQ9NSI2 230 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 ABHD10Q9NUJ1 306 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 HSPBP1Q9NZL4 362 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 CEP72Q9P209 647 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 SUCLA2Q9P2R7 463 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 PYCARDQ9ULZ3 195 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 POLIQ9UNA4 740 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 TELO2Q9Y4R8 837 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 BZW2Q9Y6E2 419 aaKnown RBP4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 EPN1Q9Y6I3 576 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 STYXL1Q9Y6J8 313 aa4.31□□□□□ -1.72
HMGB1P37-201ENST00000439613 NRCAMQ92823 1304 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 ZNF233A6NK53 670 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 ANKRD63C9JTQ0 380 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 ACKR2O00590 384 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 DYNC1LI2O43237 492 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 ZEB2O60315 1214 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 FZD6O60353 706 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 DUSP11O75319 330 aaKnown RBP4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 TOM1L1O75674 476 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 C22orf31O95567 290 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 IGHA2P01877 340 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 RPLP2P05387 115 aaKnown RBP4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 GNAT1P11488 350 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 BMP4P12644 408 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 AKR1A1P14550 325 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 EPB42P16452 691 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 NPR3P17342 541 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 CYP2B6P20813 491 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 KLRC1P26715 233 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 PON1P27169 355 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 MARK3P27448 753 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 CYP2C19P33261 490 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 CYLC1P35663 651 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 MATR3P43243 847 aaKnown RBP eCLIP4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 FMO5P49326 533 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 CASP4P49662 377 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 ARSDP51689 593 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 AP3M2P53677 418 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 SOX10P56693 466 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 PTENP60484 403 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 LACTBP83111 547 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 MYL7Q01449 175 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 POU5F1Q01860 360 aaKnown RBP4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 SP3Q02447 781 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 SRSF11Q05519 484 aaKnown RBP4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 NCBP1Q09161 790 aaKnown RBP4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 KCNMA1Q12791 1236 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 BFSP1Q12934 665 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 PPFIA1Q13136 1202 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 GRM1Q13255 1194 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 CAPSQ13938 189 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 PCBP1Q15365 356 aaKnown RBP eCLIP4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 SPA17Q15506 151 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 SURF1Q15526 300 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 TRIP4Q15650 581 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 PTPN14Q15678 1187 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 MEA1Q16626 185 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 FSCN1Q16658 493 aaKnown RBP4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 MAPK6Q16659 721 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 KYAT1Q16773 422 aa4.3□□□□□ -1.72
HMGB1P37-201ENST00000439613 PTPN21Q16825 1174 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms