RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 DOCK6Q96HP0 2047 aa22.17■■□□□ 1.14
NCKIPSD-206ENST00000439518 TTC26A0AVF1 554 aa22.16■■□□□ 1.14
NCKIPSD-206ENST00000439518 FAM189A1O60320 539 aa22.16■■□□□ 1.14
NCKIPSD-206ENST00000439518 TBC1D4O60343 1298 aa22.16■■□□□ 1.14
NCKIPSD-206ENST00000439518 POU2F2P09086 479 aa22.16■■□□□ 1.14
NCKIPSD-206ENST00000439518 CXCL8P10145 99 aa22.16■■□□□ 1.14
NCKIPSD-206ENST00000439518 DDIT3P35638 169 aa22.16■■□□□ 1.14
NCKIPSD-206ENST00000439518 PTPN5P54829 565 aa22.16■■□□□ 1.14
NCKIPSD-206ENST00000439518 VARS2Q5ST30 1063 aaKnown RBP22.16■■□□□ 1.14
NCKIPSD-206ENST00000439518 SLC8B1Q6J4K2 584 aa22.16■■□□□ 1.14
NCKIPSD-206ENST00000439518 FAM173BQ6P4H8 233 aa22.16■■□□□ 1.14
NCKIPSD-206ENST00000439518 RTL10Q7L3V2 364 aa22.16■■□□□ 1.14
NCKIPSD-206ENST00000439518 RASSF8Q8NHQ8 419 aa22.16■■□□□ 1.14
NCKIPSD-206ENST00000439518 LARP4BQ92615 738 aaKnown RBP22.16■■□□□ 1.14
NCKIPSD-206ENST00000439518 BICD1Q96G01 975 aa22.16■■□□□ 1.14
NCKIPSD-206ENST00000439518 EPSTI1Q96J88 318 aa22.16■■□□□ 1.14
NCKIPSD-206ENST00000439518 SRPRBQ9Y5M8 271 aaKnown RBP22.16■■□□□ 1.14
NCKIPSD-206ENST00000439518 ANHXE9PGG2 379 aa22.15■■□□□ 1.14
NCKIPSD-206ENST00000439518 HNRNPDLO14979 420 aaKnown RBP22.15■■□□□ 1.14
NCKIPSD-206ENST00000439518 SYN3O14994 580 aa22.15■■□□□ 1.14
NCKIPSD-206ENST00000439518 TRAK2O60296 914 aa22.15■■□□□ 1.14
NCKIPSD-206ENST00000439518 FSHRP23945 695 aa22.15■■□□□ 1.14
NCKIPSD-206ENST00000439518 MARCKSP29966 332 aaPredicted RBP22.15■■□□□ 1.14
NCKIPSD-206ENST00000439518 LIG4P49917 911 aa22.15■■□□□ 1.14
NCKIPSD-206ENST00000439518 NUBP1P53384 320 aa22.15■■□□□ 1.14
NCKIPSD-206ENST00000439518 NTHL1P78549 312 aa22.15■■□□□ 1.14
NCKIPSD-206ENST00000439518 MRPL58Q14197 206 aaKnown RBP22.15■■□□□ 1.14
NCKIPSD-206ENST00000439518 ZBTB6Q15916 424 aa22.15■■□□□ 1.14
NCKIPSD-206ENST00000439518 KYAT1Q16773 422 aa22.15■■□□□ 1.14
NCKIPSD-206ENST00000439518 SPECC1Q5M775 1068 aa22.15■■□□□ 1.14
NCKIPSD-206ENST00000439518 GET4Q7L5D6 327 aaPredicted RBP22.15■■□□□ 1.14
NCKIPSD-206ENST00000439518 SLC44A3Q8N4M1 653 aa22.15■■□□□ 1.14
NCKIPSD-206ENST00000439518 SUSD3Q96L08 255 aa22.15■■□□□ 1.14
NCKIPSD-206ENST00000439518 TUBGCP4Q9UGJ1 667 aa22.15■■□□□ 1.14
NCKIPSD-206ENST00000439518 A0A0B4J269 797 aa22.14■■□□□ 1.13
NCKIPSD-206ENST00000439518 K7ENM7 598 aa22.14■■□□□ 1.13
NCKIPSD-206ENST00000439518 CCL16O15467 120 aa22.14■■□□□ 1.13
NCKIPSD-206ENST00000439518 NARSO43776 548 aaKnown RBP22.14■■□□□ 1.13
NCKIPSD-206ENST00000439518 XYLBO75191 536 aa22.14■■□□□ 1.13
NCKIPSD-206ENST00000439518 KRT18P05783 430 aaKnown RBP22.14■■□□□ 1.13
NCKIPSD-206ENST00000439518 TNFSF9P41273 254 aa22.14■■□□□ 1.13
NCKIPSD-206ENST00000439518 MATR3P43243 847 aaKnown RBP eCLIP22.14■■□□□ 1.13
NCKIPSD-206ENST00000439518 ALYREFQ86V81 257 aaKnown RBP22.14■■□□□ 1.13
NCKIPSD-206ENST00000439518 TMEM105Q8N8V8 129 aa22.14■■□□□ 1.13
NCKIPSD-206ENST00000439518 ZNF461Q8TAF7 563 aa22.14■■□□□ 1.13
NCKIPSD-206ENST00000439518 MTMR6Q9Y217 621 aa22.14■■□□□ 1.13
NCKIPSD-206ENST00000439518 NUB1Q9Y5A7 615 aa22.14■■□□□ 1.13
NCKIPSD-206ENST00000439518 ZFP37Q9Y6Q3 630 aaPredicted RBP22.14■■□□□ 1.13
NCKIPSD-206ENST00000439518 PDCD11Q14690 1871 aaKnown RBP22.13■■□□□ 1.13
NCKIPSD-206ENST00000439518 OGTO15294 1046 aa22.13■■□□□ 1.13
NCKIPSD-206ENST00000439518 TBCAO75347 108 aaKnown RBP22.13■■□□□ 1.13
NCKIPSD-206ENST00000439518 ABLIM3O94929 683 aa22.13■■□□□ 1.13
NCKIPSD-206ENST00000439518 ADRB2P07550 413 aa22.13■■□□□ 1.13
NCKIPSD-206ENST00000439518 LRPAP1P30533 357 aa22.13■■□□□ 1.13
NCKIPSD-206ENST00000439518 CLCN5P51795 746 aa22.13■■□□□ 1.13
NCKIPSD-206ENST00000439518 GTF2BQ00403 316 aa22.13■■□□□ 1.13
NCKIPSD-206ENST00000439518 ROR1Q01973 937 aa22.13■■□□□ 1.13
NCKIPSD-206ENST00000439518 HTR4Q13639 388 aa22.13■■□□□ 1.13
NCKIPSD-206ENST00000439518 ENOX2Q16206 610 aaKnown RBP22.13■■□□□ 1.13
NCKIPSD-206ENST00000439518 ZBTB41Q5SVQ8 909 aa22.13■■□□□ 1.13
NCKIPSD-206ENST00000439518 ASTLQ6HA08 431 aaPredicted RBP22.13■■□□□ 1.13
NCKIPSD-206ENST00000439518 SLC39A4Q6P5W5 647 aa22.13■■□□□ 1.13
NCKIPSD-206ENST00000439518 ST6GALNAC4Q9H4F1 302 aa22.13■■□□□ 1.13
NCKIPSD-206ENST00000439518 ZHX3Q9H4I2 956 aa22.13■■□□□ 1.13
NCKIPSD-206ENST00000439518 STK17AQ9UEE5 414 aa22.13■■□□□ 1.13
NCKIPSD-206ENST00000439518 CDH7Q9ULB5 785 aa22.13■■□□□ 1.13
NCKIPSD-206ENST00000439518 MORC2Q9Y6X9 1032 aaPredicted RBP22.13■■□□□ 1.13
NCKIPSD-206ENST00000439518 K7ELQ4 463 aaPredicted RBP22.12■■□□□ 1.13
NCKIPSD-206ENST00000439518 NPR3P17342 541 aa22.12■■□□□ 1.13
NCKIPSD-206ENST00000439518 NMT1P30419 496 aaKnown RBP22.12■■□□□ 1.13
NCKIPSD-206ENST00000439518 ABCD1P33897 745 aa22.12■■□□□ 1.13
NCKIPSD-206ENST00000439518 SPAG1Q07617 926 aa22.12■■□□□ 1.13
NCKIPSD-206ENST00000439518 MAP4K3Q8IVH8 894 aa22.12■■□□□ 1.13
NCKIPSD-206ENST00000439518 TMEM130Q8N3G9 435 aa22.12■■□□□ 1.13
NCKIPSD-206ENST00000439518 KIF12Q96FN5 646 aa22.12■■□□□ 1.13
NCKIPSD-206ENST00000439518 CLIC6Q96NY7 704 aa22.12■■□□□ 1.13
NCKIPSD-206ENST00000439518 MFSD1Q9H3U5 465 aa22.12■■□□□ 1.13
NCKIPSD-206ENST00000439518 FBXL5Q9UKA1 691 aa22.12■■□□□ 1.13
NCKIPSD-206ENST00000439518 POLIQ9UNA4 740 aa22.12■■□□□ 1.13
NCKIPSD-206ENST00000439518 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.12■■□□□ 1.13
NCKIPSD-206ENST00000439518 WDR27A2RRH5 827 aa22.11■■□□□ 1.13
NCKIPSD-206ENST00000439518 LACTBL1A8MY62 500 aa22.11■■□□□ 1.13
NCKIPSD-206ENST00000439518 H7C4K7 107 aa22.11■■□□□ 1.13
NCKIPSD-206ENST00000439518 CYP3A5P20815 502 aa22.11■■□□□ 1.13
NCKIPSD-206ENST00000439518 MCM4P33991 863 aa22.11■■□□□ 1.13
NCKIPSD-206ENST00000439518 MRE11P49959 708 aa22.11■■□□□ 1.13
NCKIPSD-206ENST00000439518 CEBPZQ03701 1054 aaKnown RBP22.11■■□□□ 1.13
NCKIPSD-206ENST00000439518 CWF19L1Q69YN2 538 aaKnown RBP22.11■■□□□ 1.13
NCKIPSD-206ENST00000439518 TSPAN18Q96SJ8 248 aa22.11■■□□□ 1.13
NCKIPSD-206ENST00000439518 PHOX2BQ99453 314 aa22.11■■□□□ 1.13
NCKIPSD-206ENST00000439518 HCFC1R1Q9NWW0 138 aa22.11■■□□□ 1.13
NCKIPSD-206ENST00000439518 DNMT3BQ9UBC3 853 aaKnown RBP22.11■■□□□ 1.13
NCKIPSD-206ENST00000439518 WNT16Q9UBV4 365 aa22.11■■□□□ 1.13
NCKIPSD-206ENST00000439518 CCDC39Q9UFE4 941 aa22.11■■□□□ 1.13
NCKIPSD-206ENST00000439518 FBXL21Q9UKT6 434 aa22.11■■□□□ 1.13
NCKIPSD-206ENST00000439518 ARHGEF37A1IGU5 675 aa22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 GALR2O43603 387 aaPredicted RBP22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 SRFP11831 508 aa22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 ATF2P15336 505 aa22.1■■□□□ 1.13
NCKIPSD-206ENST00000439518 PPP2R3AQ06190 1150 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms