RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 ARHGAP27Q6ZUM4 889 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 CERS5Q8N5B7 392 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 TLCD1Q96CP7 247 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.73■□□□□ 0.272e-6■■□□□ 13.2
DHFR-201ENST00000439211 DCTN4Q9UJW0 460 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 SNED1Q8TER0 1413 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 DDTLA6NHG4 134 aaPredicted RBP16.73■□□□□ 0.27
DHFR-201ENST00000439211 RBAK-RBAKDNI3L0D1 243 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 CCNG1P51959 295 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 TRIP13Q15645 432 aaPredicted RBP16.73■□□□□ 0.27
DHFR-201ENST00000439211 COL23A1Q86Y22 540 aaPredicted RBP16.73■□□□□ 0.27
DHFR-201ENST00000439211 FBXO25Q8TCJ0 367 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 FAM163AQ96GL9 167 aaPredicted RBP16.73■□□□□ 0.27
DHFR-201ENST00000439211 TDRKHQ9Y2W6 561 aaKnown RBP16.73■□□□□ 0.27
DHFR-201ENST00000439211 EML1O00423 815 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 PENKP01210 267 aaPredicted RBP16.73■□□□□ 0.27
DHFR-201ENST00000439211 CD151P48509 253 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 SLC34A1Q06495 639 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 DNAJC3Q13217 504 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 TMEM179Q6ZVK1 233 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 MIER3Q7Z3K6 550 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 SCUBE1Q8IWY4 988 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 ACTRT1Q8TDG2 376 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 PGM2Q96G03 612 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 NACC1Q96RE7 527 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 TIPINQ9BVW5 301 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 KCNQ5Q9NR82 932 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 BARX2Q9UMQ3 279 aaPredicted RBP16.73■□□□□ 0.27
DHFR-201ENST00000439211 STK24Q9Y6E0 443 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 ATMINO43313 823 aaPredicted RBP16.72■□□□□ 0.27
DHFR-201ENST00000439211 LYNP07948 512 aa16.72■□□□□ 0.27
DHFR-201ENST00000439211 PYGMP11217 842 aa16.72■□□□□ 0.27
DHFR-201ENST00000439211 STAT2P52630 851 aa16.72■□□□□ 0.27
DHFR-201ENST00000439211 RTP1P59025 263 aa16.72■□□□□ 0.27
DHFR-201ENST00000439211 NCCRP1Q6ZVX7 275 aaPredicted RBP16.72■□□□□ 0.27
DHFR-201ENST00000439211 RASSF3Q86WH2 238 aa16.72■□□□□ 0.27
DHFR-201ENST00000439211 ZNF510Q9Y2H8 683 aa16.72■□□□□ 0.27
DHFR-201ENST00000439211 MYH14Q7Z406 1995 aaKnown RBP16.72■□□□□ 0.27
DHFR-201ENST00000439211 GNAZP19086 355 aa16.72■□□□□ 0.27
DHFR-201ENST00000439211 BTKQ06187 659 aa16.72■□□□□ 0.27
DHFR-201ENST00000439211 RUNDC3BQ96NL0 473 aa16.72■□□□□ 0.27
DHFR-201ENST00000439211 PLVAPQ9BX97 442 aa16.72■□□□□ 0.27
DHFR-201ENST00000439211 TRAF3IP3Q9Y228 551 aa16.72■□□□□ 0.27
DHFR-201ENST00000439211 SUGT1Q9Y2Z0 365 aa16.72■□□□□ 0.27
DHFR-201ENST00000439211 SMAPO00193 183 aa16.72■□□□□ 0.27
DHFR-201ENST00000439211 MYCLP12524 364 aaPredicted RBP16.72■□□□□ 0.27
DHFR-201ENST00000439211 GYS1P13807 737 aa16.72■□□□□ 0.27
DHFR-201ENST00000439211 THOC5Q13769 683 aaKnown RBP16.72■□□□□ 0.27
DHFR-201ENST00000439211 EPHA7Q15375 998 aa16.72■□□□□ 0.27
DHFR-201ENST00000439211 MARK2Q7KZI7 788 aaKnown RBP16.72■□□□□ 0.27
DHFR-201ENST00000439211 GJD4Q96KN9 370 aaPredicted RBP16.72■□□□□ 0.27
DHFR-201ENST00000439211 FAM161BQ96MY7 647 aa16.72■□□□□ 0.27
DHFR-201ENST00000439211 MPHOSPH6Q99547 160 aaKnown RBP16.72■□□□□ 0.27
DHFR-201ENST00000439211 STK33Q9BYT3 514 aa16.72■□□□□ 0.27
DHFR-201ENST00000439211 KCNMB3Q9NPA1 279 aa16.72■□□□□ 0.27
DHFR-201ENST00000439211 GAKO14976 1311 aa16.71■□□□□ 0.27
DHFR-201ENST00000439211 DLATP10515 647 aaKnown RBP16.71■□□□□ 0.27
DHFR-201ENST00000439211 CETN2P41208 172 aa16.71■□□□□ 0.27
DHFR-201ENST00000439211 KCNJ1P48048 391 aa16.71■□□□□ 0.27
DHFR-201ENST00000439211 KHDC1Q4VXA5 237 aaKnown RBP16.71■□□□□ 0.27
DHFR-201ENST00000439211 EAPPQ56P03 285 aaPredicted RBP16.71■□□□□ 0.27
DHFR-201ENST00000439211 GSDMBQ8TAX9 411 aa16.71■□□□□ 0.27
DHFR-201ENST00000439211 GRAMD1AQ96CP6 724 aa16.71■□□□□ 0.27
DHFR-201ENST00000439211 EMSYQ7Z589 1322 aa16.71■□□□□ 0.27
DHFR-201ENST00000439211 FOXN3O00409 490 aaPredicted RBP16.71■□□□□ 0.27
DHFR-201ENST00000439211 MEIS2O14770 477 aa16.71■□□□□ 0.27
DHFR-201ENST00000439211 MED21Q13503 144 aa16.71■□□□□ 0.27
DHFR-201ENST00000439211 RASA3Q14644 834 aa16.71■□□□□ 0.27
DHFR-201ENST00000439211 AADACL2Q6P093 401 aa16.71■□□□□ 0.27
DHFR-201ENST00000439211 FNBP1Q96RU3 617 aa16.71■□□□□ 0.27
DHFR-201ENST00000439211 NDE1Q9NXR1 346 aa16.71■□□□□ 0.27
DHFR-201ENST00000439211 ALG6Q9Y672 507 aa16.71■□□□□ 0.27
DHFR-201ENST00000439211 ESRRAP11474 423 aaPredicted RBP16.71■□□□□ 0.27
DHFR-201ENST00000439211 KRT15P19012 456 aa16.71■□□□□ 0.27
DHFR-201ENST00000439211 CCDC15Q0P6D6 951 aa16.71■□□□□ 0.27
DHFR-201ENST00000439211 PARP6Q2NL67 630 aa16.71■□□□□ 0.27
DHFR-201ENST00000439211 LRRC8BQ6P9F7 803 aa16.71■□□□□ 0.27
DHFR-201ENST00000439211 ISLR2Q6UXK2 745 aa16.71■□□□□ 0.27
DHFR-201ENST00000439211 GSTA5Q7RTV2 222 aa16.71■□□□□ 0.27
DHFR-201ENST00000439211 PARP2Q9UGN5 583 aa16.71■□□□□ 0.27
DHFR-201ENST00000439211 MTTPP55157 894 aa16.7■□□□□ 0.26
DHFR-201ENST00000439211 MKRN3Q13064 507 aaKnown RBP16.7■□□□□ 0.26
DHFR-201ENST00000439211 NT5DC3Q86UY8 548 aa16.7■□□□□ 0.26
DHFR-201ENST00000439211 AGBL1Q96MI9 1066 aa16.7■□□□□ 0.26
DHFR-201ENST00000439211 TEKT3Q9BXF9 490 aa16.7■□□□□ 0.26
DHFR-201ENST00000439211 ASCC2Q9H1I8 757 aaPredicted RBP16.7■□□□□ 0.26
DHFR-201ENST00000439211 APEX2Q9UBZ4 518 aa16.7■□□□□ 0.26
DHFR-201ENST00000439211 SPATA31C1P0DKV0 1188 aa16.7■□□□□ 0.26
DHFR-201ENST00000439211 GABPAQ06546 454 aa16.7■□□□□ 0.26
DHFR-201ENST00000439211 PPP2R5EQ16537 467 aa16.7■□□□□ 0.26
DHFR-201ENST00000439211 QTRT2Q9H974 415 aaKnown RBP16.7■□□□□ 0.26
DHFR-201ENST00000439211 COL4A1P02462 1669 aa16.7■□□□□ 0.26
DHFR-201ENST00000439211 THAP12O43422 761 aa16.7■□□□□ 0.26
DHFR-201ENST00000439211 SNHG28P0DPA3 235 aa16.7■□□□□ 0.26
DHFR-201ENST00000439211 FAM102BQ5T8I3 360 aa16.7■□□□□ 0.26
DHFR-201ENST00000439211 PPP1R21Q6ZMI0 780 aa16.7■□□□□ 0.26
DHFR-201ENST00000439211 ECHDC2Q86YB7 292 aa16.7■□□□□ 0.26
DHFR-201ENST00000439211 SP8Q8IXZ3 490 aa16.7■□□□□ 0.26
DHFR-201ENST00000439211 EIF1ADQ8N9N8 165 aaKnown RBP16.7■□□□□ 0.26
DHFR-201ENST00000439211 LXNQ9BS40 222 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms