RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 CCDC183Q5T5S1 534 aa18.32■□□□□ 0.52
TARDBP-203ENST00000439080 SPATA1Q5VX52 437 aa18.32■□□□□ 0.52
TARDBP-203ENST00000439080 CEP135Q66GS9 1140 aa18.32■□□□□ 0.52
TARDBP-203ENST00000439080 DDX53Q86TM3 631 aaKnown RBP18.32■□□□□ 0.52
TARDBP-203ENST00000439080 NT5DC4Q86YG4 428 aa18.32■□□□□ 0.52
TARDBP-203ENST00000439080 BEST2Q8NFU1 509 aa18.32■□□□□ 0.52
TARDBP-203ENST00000439080 DDX27Q96GQ7 796 aaKnown RBP18.32■□□□□ 0.52
TARDBP-203ENST00000439080 DHTKD1Q96HY7 919 aaPredicted RBP18.32■□□□□ 0.52
TARDBP-203ENST00000439080 TCF25Q9BQ70 676 aa18.32■□□□□ 0.52
TARDBP-203ENST00000439080 ENTPD7Q9NQZ7 604 aa18.32■□□□□ 0.52
TARDBP-203ENST00000439080 LMCD1Q9NZU5 365 aa18.32■□□□□ 0.52
TARDBP-203ENST00000439080 PUF60Q9UHX1 559 aaKnown RBP18.32■□□□□ 0.52
TARDBP-203ENST00000439080 SF3B1O75533 1304 aaKnown RBP eCLIP18.32■□□□□ 0.52
TARDBP-203ENST00000439080 PTPRJQ12913 1337 aa18.32■□□□□ 0.52
TARDBP-203ENST00000439080 XIRP2A4UGR9 3374 aa18.32■□□□□ 0.52
TARDBP-203ENST00000439080 MYO7AQ13402 2215 aa18.32■□□□□ 0.52
TARDBP-203ENST00000439080 TADA2AO75478 443 aa18.31■□□□□ 0.52
TARDBP-203ENST00000439080 B3GAT3O94766 335 aa18.31■□□□□ 0.52
TARDBP-203ENST00000439080 CCNE1P24864 410 aa18.31■□□□□ 0.52
TARDBP-203ENST00000439080 RPL13P26373 211 aaKnown RBP18.31■□□□□ 0.52
TARDBP-203ENST00000439080 LRPAP1P30533 357 aa18.31■□□□□ 0.52
TARDBP-203ENST00000439080 RPL9P32969 192 aaKnown RBP18.31■□□□□ 0.52
TARDBP-203ENST00000439080 IRS1P35568 1242 aa18.31■□□□□ 0.52
TARDBP-203ENST00000439080 CASP4P49662 377 aa18.31■□□□□ 0.52
TARDBP-203ENST00000439080 TFAMQ00059 246 aaKnown RBP18.31■□□□□ 0.52
TARDBP-203ENST00000439080 LRRC63Q05C16 580 aa18.31■□□□□ 0.52
TARDBP-203ENST00000439080 PSMD6Q15008 389 aa18.31■□□□□ 0.52
TARDBP-203ENST00000439080 SURF1Q15526 300 aa18.31■□□□□ 0.52
TARDBP-203ENST00000439080 PLPP4Q5VZY2 271 aa18.31■□□□□ 0.52
TARDBP-203ENST00000439080 FUT10Q6P4F1 479 aa18.31■□□□□ 0.52
TARDBP-203ENST00000439080 RBM43Q6ZSC3 357 aaKnown RBP18.31■□□□□ 0.52
TARDBP-203ENST00000439080 VPS52Q8N1B4 723 aa18.31■□□□□ 0.52
TARDBP-203ENST00000439080 MICALL1Q8N3F8 863 aa18.31■□□□□ 0.52
TARDBP-203ENST00000439080 NELFBQ8WX92 580 aa18.31■□□□□ 0.52
TARDBP-203ENST00000439080 FAM84AQ96KN4 292 aa18.31■□□□□ 0.52
TARDBP-203ENST00000439080 HERC2P3Q9BVR0 1158 aa18.31■□□□□ 0.52
TARDBP-203ENST00000439080 ZBP1Q9H171 429 aa18.31■□□□□ 0.52
TARDBP-203ENST00000439080 STK39Q9UEW8 545 aa18.31■□□□□ 0.52
TARDBP-203ENST00000439080 FRMD4BQ9Y2L6 1034 aa18.31■□□□□ 0.52
TARDBP-203ENST00000439080 PCDHGC5Q9Y5F6 944 aa18.31■□□□□ 0.52
TARDBP-203ENST00000439080 FSCN2O14926 492 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 EFEMP2O95967 443 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 SOD2P04179 222 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 DLATP10515 647 aaKnown RBP18.3■□□□□ 0.52
TARDBP-203ENST00000439080 PTMSP20962 102 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 IGFBP6P24592 240 aaPredicted RBP18.3■□□□□ 0.52
TARDBP-203ENST00000439080 ERVFC1P60507 584 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 PAK1Q13153 545 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 LMBRD2Q68DH5 695 aaPredicted RBP18.3■□□□□ 0.52
TARDBP-203ENST00000439080 ANKRD40Q6AI12 368 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 DCLRE1AQ6PJP8 1040 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 WDR49Q8IV35 697 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 RNF168Q8IYW5 571 aaPredicted RBP18.3■□□□□ 0.52
TARDBP-203ENST00000439080 CCDC127Q96BQ5 260 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 MFSD14AQ96MC6 490 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 FNBP1Q96RU3 617 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 MTMR12Q9C0I1 747 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 PLXNA3P51805 1871 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 AKAP3O75969 853 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 TMEM191BP0C7N4 346 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 ADAM9Q13443 819 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 DPCR1Q3MIW9 517 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 TMC7Q7Z402 723 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 ZC3H3Q8IXZ2 948 aaKnown RBP18.3■□□□□ 0.52
TARDBP-203ENST00000439080 EEF2KMTQ96G04 330 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 CGRRF1Q99675 332 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 GPR62Q9BZJ7 368 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 GZF1Q9H116 711 aaPredicted RBP18.3■□□□□ 0.52
TARDBP-203ENST00000439080 NSUN3Q9H649 340 aaKnown RBP18.3■□□□□ 0.52
TARDBP-203ENST00000439080 DPP3Q9NY33 737 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 TMEM63CQ9P1W3 806 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 STXBP5LQ9Y2K9 1186 aa18.3■□□□□ 0.52
TARDBP-203ENST00000439080 SPTBN5Q9NRC6 3674 aaKnown RBP18.29■□□□□ 0.52
TARDBP-203ENST00000439080 BICDL2A1A5D9 508 aa18.29■□□□□ 0.52
TARDBP-203ENST00000439080 PPEF2O14830 753 aa18.29■□□□□ 0.52
TARDBP-203ENST00000439080 MAPK13O15264 365 aa18.29■□□□□ 0.52
TARDBP-203ENST00000439080 CTSAP10619 480 aa18.29■□□□□ 0.52
TARDBP-203ENST00000439080 CA8P35219 290 aa18.29■□□□□ 0.52
TARDBP-203ENST00000439080 SMC1AQ14683 1233 aaKnown RBP18.29■□□□□ 0.52
TARDBP-203ENST00000439080 C9orf57Q5W0N0 161 aa18.29■□□□□ 0.52
TARDBP-203ENST00000439080 CAVIN1Q6NZI2 390 aaKnown RBP18.29■□□□□ 0.52
TARDBP-203ENST00000439080 CD300LGQ6UXG3 332 aa18.29■□□□□ 0.52
TARDBP-203ENST00000439080 FAM186BQ8IYM0 893 aa18.29■□□□□ 0.52
TARDBP-203ENST00000439080 OR5B17Q8NGF7 314 aa18.29■□□□□ 0.52
TARDBP-203ENST00000439080 PLEKHO2Q8TD55 490 aa18.29■□□□□ 0.52
TARDBP-203ENST00000439080 MICAL1Q8TDZ2 1067 aa18.29■□□□□ 0.52
TARDBP-203ENST00000439080 CACTINQ8WUQ7 758 aaKnown RBP18.29■□□□□ 0.52
TARDBP-203ENST00000439080 ANKRD36BP1Q96IX9 119 aa18.29■□□□□ 0.52
TARDBP-203ENST00000439080 B3GALT6Q96L58 329 aa18.29■□□□□ 0.52
TARDBP-203ENST00000439080 INTS13Q9NVM9 706 aa18.29■□□□□ 0.52
TARDBP-203ENST00000439080 NUB1Q9Y5A7 615 aa18.29■□□□□ 0.52
TARDBP-203ENST00000439080 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.28■□□□□ 0.52
TARDBP-203ENST00000439080 I3L4J1 428 aa18.28■□□□□ 0.52
TARDBP-203ENST00000439080 CETN3O15182 167 aa18.28■□□□□ 0.52
TARDBP-203ENST00000439080 ITGB3P05106 788 aa18.28■□□□□ 0.52
TARDBP-203ENST00000439080 URODP06132 367 aa18.28■□□□□ 0.52
TARDBP-203ENST00000439080 TNNI1P19237 187 aa18.28■□□□□ 0.52
TARDBP-203ENST00000439080 PSMC2P35998 433 aaKnown RBP18.28■□□□□ 0.52
TARDBP-203ENST00000439080 BRCC3P46736 316 aa18.28■□□□□ 0.52
TARDBP-203ENST00000439080 GLUD2P49448 558 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms