RNA–Protein interactions for RNA: ENST00000438886.1

APEX1-203, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-203ENST00000438886 TRAPPC3O43617 180 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 ZC3H11AO75152 810 aaKnown RBP eCLIP9.17□□□□□ -0.94
APEX1-203ENST00000438886 STAU1O95793 577 aaKnown RBP9.17□□□□□ -0.94
APEX1-203ENST00000438886 NFICP08651 508 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 ATICP31939 592 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 MXI1P50539 228 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 ERVK-21P61565 698 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 TFAMQ00059 246 aaKnown RBP9.17□□□□□ -0.94
APEX1-203ENST00000438886 KRT17Q04695 432 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 BMS1Q14692 1282 aaKnown RBP9.17□□□□□ -0.94
APEX1-203ENST00000438886 MAN2A1Q16706 1144 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 ZACNQ401N2 412 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 GLRA4Q5JXX5 417 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 CDKAL1Q5VV42 579 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 PPP2R2DQ66LE6 453 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 DCLRE1AQ6PJP8 1040 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 KCNT2Q6UVM3 1135 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 EFCAB13Q8IY85 973 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 GPR65Q8IYL9 337 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 AOPEPQ8N6M6 819 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 COLGALT1Q8NBJ5 622 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 CCDC150Q8NCX0 1101 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 ZSWIM2Q8NEG5 633 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 SPATA18Q8TC71 538 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 TAF4BQ92750 862 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 SLC35C1Q96A29 364 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 CCDC127Q96BQ5 260 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 TIFAQ96CG3 184 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 ZMAT2Q96NC0 199 aaKnown RBP9.17□□□□□ -0.94
APEX1-203ENST00000438886 MED15Q96RN5 788 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 IMPG2Q9BZV3 1241 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 FAM124BQ9H5Z6 455 aaPredicted RBP9.17□□□□□ -0.94
APEX1-203ENST00000438886 NRDE2Q9H7Z3 1164 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 TMEM8AQ9HCN3 771 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 DPP3Q9NY33 737 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 SPG21Q9NZD8 308 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 PLAGL2Q9UPG8 496 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 FAN1Q9Y2M0 1017 aa9.17□□□□□ -0.94
APEX1-203ENST00000438886 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.17□□□□□ -0.94
APEX1-203ENST00000438886 MRPL42Q9Y6G3 142 aaKnown RBP9.17□□□□□ -0.94
APEX1-203ENST00000438886 SF3B1O75533 1304 aaKnown RBP eCLIP9.16□□□□□ -0.94
APEX1-203ENST00000438886 KCNJ18B7U540 433 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 PODXLO00592 558 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 MEFVO15553 781 aaPredicted RBP9.16□□□□□ -0.94
APEX1-203ENST00000438886 AFPP02771 609 aaKnown RBP9.16□□□□□ -0.94
APEX1-203ENST00000438886 CA3P07451 260 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 GALTP07902 379 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 P4HA1P13674 534 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 ZNF18P17022 549 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 CTNNB1P35222 781 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 BMPR1AP36894 532 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 MTIF2P46199 727 aaKnown RBP9.16□□□□□ -0.94
APEX1-203ENST00000438886 GATMP50440 423 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 RABGGTBP53611 331 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 BCAR1P56945 870 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 RBP5P82980 135 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 PLCB3Q01970 1234 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 MYO1EQ12965 1108 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 BIRC3Q13489 604 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 KCNJ12Q14500 433 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 IQCB1Q15051 598 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 UPP1Q16831 310 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 SV2CQ496J9 727 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 TCP11X2Q5H9J9 407 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 DCAF17Q5H9S7 520 aaPredicted RBP9.16□□□□□ -0.94
APEX1-203ENST00000438886 TCERG1LQ5VWI1 586 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 KRT39Q6A163 491 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 FAM109BQ6ICB4 259 aaPredicted RBP9.16□□□□□ -0.94
APEX1-203ENST00000438886 PDE12Q6L8Q7 609 aaKnown RBP9.16□□□□□ -0.94
APEX1-203ENST00000438886 PDXDC1Q6P996 788 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 TRAPPC11Q7Z392 1133 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 TMCO2Q7Z6W1 182 aaPredicted RBP9.16□□□□□ -0.94
APEX1-203ENST00000438886 IRF2BP1Q8IU81 584 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 SLC39A11Q8N1S5 342 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 C1orf127Q8N9H9 656 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 TMEM169Q96HH4 297 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 FAM81BQ96LP2 452 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 MTMR12Q9C0I1 747 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 LMAN2LQ9H0V9 348 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 GZF1Q9H116 711 aaPredicted RBP9.16□□□□□ -0.94
APEX1-203ENST00000438886 VRTNQ9H8Y1 702 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 CBX8Q9HC52 389 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 MIOSQ9NXC5 875 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 PCDH10Q9P2E7 1040 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 PUF60Q9UHX1 559 aaKnown RBP9.16□□□□□ -0.94
APEX1-203ENST00000438886 SSX2IPQ9Y2D8 614 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 COQ4Q9Y3A0 265 aa9.16□□□□□ -0.94
APEX1-203ENST00000438886 SCN1AP35498 2009 aa9.15□□□□□ -0.94
APEX1-203ENST00000438886 CASTOR2A6NHX0 329 aa9.15□□□□□ -0.94
APEX1-203ENST00000438886 LRRC10BA6NIK2 292 aa9.15□□□□□ -0.94
APEX1-203ENST00000438886 GRXCR1A8MXD5 290 aa9.15□□□□□ -0.94
APEX1-203ENST00000438886 PIRO00625 290 aa9.15□□□□□ -0.94
APEX1-203ENST00000438886 NRP1O14786 923 aa9.15□□□□□ -0.94
APEX1-203ENST00000438886 SYN3O14994 580 aa9.15□□□□□ -0.94
APEX1-203ENST00000438886 PHACTR2O75167 634 aa9.15□□□□□ -0.94
APEX1-203ENST00000438886 B3GAT3O94766 335 aa9.15□□□□□ -0.94
APEX1-203ENST00000438886 DDHD2O94830 711 aa9.15□□□□□ -0.94
APEX1-203ENST00000438886 C4BPAP04003 597 aaKnown RBP9.15□□□□□ -0.94
APEX1-203ENST00000438886 ITGB3P05106 788 aa9.15□□□□□ -0.94
APEX1-203ENST00000438886 FAM163BP0C2L3 166 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms