RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 C2CD2Q9Y426 696 aa17.51■□□□□ 0.39
SNRPB-202ENST00000438552 MYO7AQ13402 2215 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 PPEF2O14830 753 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 B3GAT3O94766 335 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 ERVFC1P60507 584 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 TFAMQ00059 246 aaKnown RBP17.5■□□□□ 0.39
SNRPB-202ENST00000438552 PSMD6Q15008 389 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 EDRF1Q3B7T1 1238 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 ANKRD40Q6AI12 368 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 FUT10Q6P4F1 479 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 VPS52Q8N1B4 723 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 TMEM174Q8WUU8 243 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 NELFBQ8WX92 580 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 EEF2KMTQ96G04 330 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 TSPAN18Q96SJ8 248 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 TSG101Q99816 390 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 TCF25Q9BQ70 676 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 HERC2P3Q9BVR0 1158 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 GPR62Q9BZJ7 368 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 MTMR12Q9C0I1 747 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 ZBP1Q9H171 429 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 ENTPD7Q9NQZ7 604 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 LMCD1Q9NZU5 365 aa17.5■□□□□ 0.39
SNRPB-202ENST00000438552 PUF60Q9UHX1 559 aaKnown RBP17.5■□□□□ 0.39
SNRPB-202ENST00000438552 SF3B1O75533 1304 aaKnown RBP eCLIP17.49■□□□□ 0.393e-6■■■■■ 137.9
SNRPB-202ENST00000438552 TMEM189-UBE2V1I3L0A0 370 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 FSCN2O14926 492 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 TADA2AO75478 443 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 EFEMP2O95967 443 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 DLATP10515 647 aaKnown RBP17.49■□□□□ 0.39
SNRPB-202ENST00000438552 POU3F3P20264 500 aaPredicted RBP17.49■□□□□ 0.39
SNRPB-202ENST00000438552 CYP3A5P20815 502 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 CCNE1P24864 410 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 LRPAP1P30533 357 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 CA8P35219 290 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 PPP1R2P41236 205 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 MYBPC2Q14324 1141 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 TIGD5Q53EQ6 642 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 CCDC183Q5T5S1 534 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 CD300LGQ6UXG3 332 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 TAS1R1Q7RTX1 841 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 RNF168Q8IYW5 571 aaPredicted RBP17.49■□□□□ 0.39
SNRPB-202ENST00000438552 PLEKHO2Q8TD55 490 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 AUTS2Q8WXX7 1259 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 CCDC127Q96BQ5 260 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 DDX27Q96GQ7 796 aaKnown RBP17.49■□□□□ 0.39
SNRPB-202ENST00000438552 DHTKD1Q96HY7 919 aaPredicted RBP17.49■□□□□ 0.39
SNRPB-202ENST00000438552 B3GALT6Q96L58 329 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 CGRRF1Q99675 332 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 GZF1Q9H116 711 aaPredicted RBP17.49■□□□□ 0.39
SNRPB-202ENST00000438552 TMEM63CQ9P1W3 806 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 FRMD4BQ9Y2L6 1034 aa17.49■□□□□ 0.39
SNRPB-202ENST00000438552 I3L4J1 428 aa17.48■□□□□ 0.39
SNRPB-202ENST00000438552 AKAP3O75969 853 aa17.48■□□□□ 0.39
SNRPB-202ENST00000438552 SOD2P04179 222 aa17.48■□□□□ 0.39
SNRPB-202ENST00000438552 TMEM191BP0C7N4 346 aa17.48■□□□□ 0.39
SNRPB-202ENST00000438552 RPL13P26373 211 aaKnown RBP17.48■□□□□ 0.39
SNRPB-202ENST00000438552 RPL9P32969 192 aaKnown RBP17.48■□□□□ 0.39
SNRPB-202ENST00000438552 BRCC3P46736 316 aa17.48■□□□□ 0.39
SNRPB-202ENST00000438552 STX17P56962 302 aa17.48■□□□□ 0.39
SNRPB-202ENST00000438552 LRRC63Q05C16 580 aa17.48■□□□□ 0.39
SNRPB-202ENST00000438552 PAK1Q13153 545 aa17.48■□□□□ 0.39
SNRPB-202ENST00000438552 ADAM9Q13443 819 aa17.48■□□□□ 0.39
SNRPB-202ENST00000438552 CCDC85BQ15834 202 aaPredicted RBP17.48■□□□□ 0.39
SNRPB-202ENST00000438552 DPCR1Q3MIW9 517 aa17.48■□□□□ 0.39
SNRPB-202ENST00000438552 DCLRE1AQ6PJP8 1040 aa17.48■□□□□ 0.39
SNRPB-202ENST00000438552 RBM43Q6ZSC3 357 aaKnown RBP17.48■□□□□ 0.39
SNRPB-202ENST00000438552 TMC7Q7Z402 723 aa17.48■□□□□ 0.39
SNRPB-202ENST00000438552 ADGRD2Q7Z7M1 963 aa17.48■□□□□ 0.39
SNRPB-202ENST00000438552 NT5DC4Q86YG4 428 aa17.48■□□□□ 0.39
SNRPB-202ENST00000438552 FAM186BQ8IYM0 893 aa17.48■□□□□ 0.39
SNRPB-202ENST00000438552 OR5B17Q8NGF7 314 aa17.48■□□□□ 0.39
SNRPB-202ENST00000438552 MFSD14AQ96MC6 490 aa17.48■□□□□ 0.39
SNRPB-202ENST00000438552 DPP3Q9NY33 737 aa17.48■□□□□ 0.39
SNRPB-202ENST00000438552 STXBP5LQ9Y2K9 1186 aa17.48■□□□□ 0.39
SNRPB-202ENST00000438552 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.48■□□□□ 0.39
SNRPB-202ENST00000438552 PLXNA3P51805 1871 aa17.48■□□□□ 0.39
SNRPB-202ENST00000438552 HIDE1A8MVS5 230 aa17.47■□□□□ 0.39
SNRPB-202ENST00000438552 SURF1Q15526 300 aa17.47■□□□□ 0.39
SNRPB-202ENST00000438552 TCEAL5Q5H9L2 206 aa17.47■□□□□ 0.39
SNRPB-202ENST00000438552 C9orf57Q5W0N0 161 aa17.47■□□□□ 0.39
SNRPB-202ENST00000438552 TTI2Q6NXR4 508 aa17.47■□□□□ 0.39
SNRPB-202ENST00000438552 CAVIN1Q6NZI2 390 aaKnown RBP17.47■□□□□ 0.39
SNRPB-202ENST00000438552 WDR49Q8IV35 697 aa17.47■□□□□ 0.39
SNRPB-202ENST00000438552 ZC3H3Q8IXZ2 948 aaKnown RBP17.47■□□□□ 0.39
SNRPB-202ENST00000438552 C1orf127Q8N9H9 656 aa17.47■□□□□ 0.39
SNRPB-202ENST00000438552 MAFAQ8NHW3 353 aaPredicted RBP17.47■□□□□ 0.39
SNRPB-202ENST00000438552 MICAL1Q8TDZ2 1067 aa17.47■□□□□ 0.39
SNRPB-202ENST00000438552 PPM1EQ8WY54 764 aa17.47■□□□□ 0.39
SNRPB-202ENST00000438552 ANKRD36BP1Q96IX9 119 aa17.47■□□□□ 0.39
SNRPB-202ENST00000438552 FNBP1Q96RU3 617 aa17.47■□□□□ 0.39
SNRPB-202ENST00000438552 POP1Q99575 1024 aaKnown RBP17.47■□□□□ 0.39
SNRPB-202ENST00000438552 DUSP9Q99956 384 aaKnown RBP17.47■□□□□ 0.39
SNRPB-202ENST00000438552 NSUN3Q9H649 340 aaKnown RBP17.47■□□□□ 0.39
SNRPB-202ENST00000438552 INTS13Q9NVM9 706 aa17.47■□□□□ 0.39
SNRPB-202ENST00000438552 NUB1Q9Y5A7 615 aa17.47■□□□□ 0.39
SNRPB-202ENST00000438552 COL6A3P12111 3177 aa17.46■□□□□ 0.39
SNRPB-202ENST00000438552 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.46■□□□□ 0.39
SNRPB-202ENST00000438552 ANO9A1A5B4 782 aa17.46■□□□□ 0.39
SNRPB-202ENST00000438552 LRRIQ3A6PVS8 624 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms