RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 NID2Q14112 1375 aa12.55□□□□□ -0.4
RTN4-211ENST00000438462 NUP210Q8TEM1 1887 aaPredicted RBP12.55□□□□□ -0.4
RTN4-211ENST00000438462 BSNQ9UPA5 3926 aa12.55□□□□□ -0.4
RTN4-211ENST00000438462 PALM3A6NDB9 673 aaPredicted RBP12.54□□□□□ -0.4
RTN4-211ENST00000438462 MOSPD3O75425 235 aa12.54□□□□□ -0.4
RTN4-211ENST00000438462 ATG7O95352 703 aa12.54□□□□□ -0.4
RTN4-211ENST00000438462 SYPP08247 313 aa12.54□□□□□ -0.4
RTN4-211ENST00000438462 MLH1P40692 756 aa12.54□□□□□ -0.4
RTN4-211ENST00000438462 SCNN1GP51170 649 aa12.54□□□□□ -0.4
RTN4-211ENST00000438462 C1QBPQ07021 282 aaKnown RBP12.54□□□□□ -0.4
RTN4-211ENST00000438462 RAB33AQ14088 237 aa12.54□□□□□ -0.4
RTN4-211ENST00000438462 C6orf118Q5T5N4 469 aa12.54□□□□□ -0.4
RTN4-211ENST00000438462 RTL10Q7L3V2 364 aa12.54□□□□□ -0.4
RTN4-211ENST00000438462 HAUS6Q7Z4H7 955 aa12.54□□□□□ -0.4
RTN4-211ENST00000438462 MRPL10Q7Z7H8 261 aaKnown RBP12.54□□□□□ -0.4
RTN4-211ENST00000438462 FRMD1Q8N878 549 aa12.54□□□□□ -0.4
RTN4-211ENST00000438462 MDGA1Q8NFP4 955 aa12.54□□□□□ -0.4
RTN4-211ENST00000438462 BAHD1Q8TBE0 780 aaPredicted RBP12.54□□□□□ -0.4
RTN4-211ENST00000438462 HASPINQ8TF76 798 aa12.54□□□□□ -0.4
RTN4-211ENST00000438462 RLN3Q8WXF3 142 aa12.54□□□□□ -0.4
RTN4-211ENST00000438462 CNOT6LQ96LI5 555 aaKnown RBP12.54□□□□□ -0.4
RTN4-211ENST00000438462 PIGSQ96S52 555 aa12.54□□□□□ -0.4
RTN4-211ENST00000438462 TTPALQ9BTX7 342 aa12.54□□□□□ -0.4
RTN4-211ENST00000438462 GCOM2Q9BZD3 368 aaPredicted RBP12.54□□□□□ -0.4
RTN4-211ENST00000438462 ZNF768Q9H5H4 540 aaKnown RBP12.54□□□□□ -0.4
RTN4-211ENST00000438462 ZNF302Q9NR11 478 aa12.54□□□□□ -0.4
RTN4-211ENST00000438462 SEPT3Q9UH03 358 aa12.54□□□□□ -0.4
RTN4-211ENST00000438462 POLQO75417 2590 aa12.54□□□□□ -0.4
RTN4-211ENST00000438462 MYH9P35579 1960 aaKnown RBP12.54□□□□□ -0.4
RTN4-211ENST00000438462 LRBAP50851 2863 aa12.53□□□□□ -0.4
RTN4-211ENST00000438462 CLEC18AA5D8T8 446 aa12.53□□□□□ -0.4
RTN4-211ENST00000438462 MAGEB2O15479 319 aa12.53□□□□□ -0.4
RTN4-211ENST00000438462 CT47B1P0C2W7 299 aaPredicted RBP12.53□□□□□ -0.4
RTN4-211ENST00000438462 OR1D2P34982 312 aa12.53□□□□□ -0.4
RTN4-211ENST00000438462 NBR1Q14596 966 aa12.53□□□□□ -0.4
RTN4-211ENST00000438462 ARHGAP29Q52LW3 1261 aa12.53□□□□□ -0.4
RTN4-211ENST00000438462 CLEC18BQ6UXF7 455 aa12.53□□□□□ -0.4
RTN4-211ENST00000438462 DGKHQ86XP1 1220 aa12.53□□□□□ -0.4
RTN4-211ENST00000438462 GPIHBP1Q8IV16 184 aa12.53□□□□□ -0.4
RTN4-211ENST00000438462 HS6ST3Q8IZP7 471 aa12.53□□□□□ -0.4
RTN4-211ENST00000438462 CLEC18CQ8NCF0 446 aa12.53□□□□□ -0.4
RTN4-211ENST00000438462 CHFRQ96EP1 664 aa12.53□□□□□ -0.4
RTN4-211ENST00000438462 SPACA7Q96KW9 195 aa12.53□□□□□ -0.4
RTN4-211ENST00000438462 MRS2Q9HD23 443 aa12.53□□□□□ -0.4
RTN4-211ENST00000438462 CACNG4Q9UBN1 327 aa12.53□□□□□ -0.4
RTN4-211ENST00000438462 NFASCO94856 1347 aa12.53□□□□□ -0.4
RTN4-211ENST00000438462 GON4LQ3T8J9 2241 aa12.53□□□□□ -0.4
RTN4-211ENST00000438462 ARL5CA6NH57 179 aa12.52□□□□□ -0.41
RTN4-211ENST00000438462 CCNE2O96020 404 aa12.52□□□□□ -0.41
RTN4-211ENST00000438462 P2RY2P41231 377 aa12.52□□□□□ -0.41
RTN4-211ENST00000438462 TRAF1Q13077 416 aa12.52□□□□□ -0.41
RTN4-211ENST00000438462 TEAD2Q15562 447 aa12.52□□□□□ -0.41
RTN4-211ENST00000438462 ITPRIPL2Q3MIP1 535 aa12.52□□□□□ -0.41
RTN4-211ENST00000438462 CCDC157Q569K6 752 aa12.52□□□□□ -0.41
RTN4-211ENST00000438462 CYP4A22Q5TCH4 519 aa12.52□□□□□ -0.41
RTN4-211ENST00000438462 VPS53Q5VIR6 699 aa12.52□□□□□ -0.41
RTN4-211ENST00000438462 FAM171A1Q5VUB5 890 aa12.52□□□□□ -0.41
RTN4-211ENST00000438462 RABEPKQ7Z6M1 372 aa12.52□□□□□ -0.41
RTN4-211ENST00000438462 FGF11Q92914 225 aa12.52□□□□□ -0.41
RTN4-211ENST00000438462 TMEM176AQ96HP8 235 aa12.52□□□□□ -0.41
RTN4-211ENST00000438462 LRRC3BQ96PB8 259 aa12.52□□□□□ -0.41
RTN4-211ENST00000438462 LGMNQ99538 433 aa12.52□□□□□ -0.41
RTN4-211ENST00000438462 KCNH7Q9NS40 1196 aa12.52□□□□□ -0.41
RTN4-211ENST00000438462 MIOSQ9NXC5 875 aa12.52□□□□□ -0.41
RTN4-211ENST00000438462 CEP131Q9UPN4 1083 aa12.52□□□□□ -0.41
RTN4-211ENST00000438462 ARHGEF37A1IGU5 675 aa12.51□□□□□ -0.41
RTN4-211ENST00000438462 KLRF2D3W0D1 207 aa12.51□□□□□ -0.41
RTN4-211ENST00000438462 DDX39AO00148 427 aaKnown RBP12.51□□□□□ -0.41
RTN4-211ENST00000438462 TRDMT1O14717 391 aaKnown RBP12.51□□□□□ -0.41
RTN4-211ENST00000438462 MAFGO15525 162 aa12.51□□□□□ -0.41
RTN4-211ENST00000438462 TADA2AO75478 443 aa12.51□□□□□ -0.41
RTN4-211ENST00000438462 MYL4P12829 197 aa12.51□□□□□ -0.41
RTN4-211ENST00000438462 SPIRE1Q08AE8 756 aa12.51□□□□□ -0.41
RTN4-211ENST00000438462 ITGB3BPQ13352 177 aaPredicted RBP12.51□□□□□ -0.41
RTN4-211ENST00000438462 SLC35G1Q2M3R5 365 aa12.51□□□□□ -0.41
RTN4-211ENST00000438462 LMBRD2Q68DH5 695 aaPredicted RBP12.51□□□□□ -0.41
RTN4-211ENST00000438462 DHRS13Q6UX07 377 aa12.51□□□□□ -0.41
RTN4-211ENST00000438462 ABHD15Q6UXT9 468 aa12.51□□□□□ -0.41
RTN4-211ENST00000438462 CATSPER4Q7RTX7 472 aa12.51□□□□□ -0.41
RTN4-211ENST00000438462 TTC30AQ86WT1 665 aa12.51□□□□□ -0.41
RTN4-211ENST00000438462 OLIG1Q8TAK6 271 aa12.51□□□□□ -0.41
RTN4-211ENST00000438462 FRAT1Q92837 279 aaPredicted RBP12.51□□□□□ -0.41
RTN4-211ENST00000438462 CUL5Q93034 780 aa12.51□□□□□ -0.41
RTN4-211ENST00000438462 ZFP42Q96MM3 310 aa12.51□□□□□ -0.41
RTN4-211ENST00000438462 FBRSL1Q9HCM7 1045 aaKnown RBP12.51□□□□□ -0.41
RTN4-211ENST00000438462 ARID2Q68CP9 1835 aa12.51□□□□□ -0.41
RTN4-211ENST00000438462 SPENQ96T58 3664 aaKnown RBP12.5□□□□□ -0.41
RTN4-211ENST00000438462 A0A087WZ62 844 aa12.5□□□□□ -0.41
RTN4-211ENST00000438462 A0A1B0GTL3 188 aa12.5□□□□□ -0.41
RTN4-211ENST00000438462 MEIS2O14770 477 aa12.5□□□□□ -0.41
RTN4-211ENST00000438462 IPO8O15397 1037 aaKnown RBP12.5□□□□□ -0.41
RTN4-211ENST00000438462 UCNP55089 124 aa12.5□□□□□ -0.41
RTN4-211ENST00000438462 MYO1EQ12965 1108 aa12.5□□□□□ -0.41
RTN4-211ENST00000438462 BROXQ5VW32 411 aa12.5□□□□□ -0.41
RTN4-211ENST00000438462 SWSAP1Q6NVH7 229 aa12.5□□□□□ -0.41
RTN4-211ENST00000438462 NAF1Q96HR8 494 aaKnown RBP12.5□□□□□ -0.41
RTN4-211ENST00000438462 PNMA5Q96PV4 448 aa12.5□□□□□ -0.41
RTN4-211ENST00000438462 FDXACB1Q9BRP7 624 aaPredicted RBP12.5□□□□□ -0.41
RTN4-211ENST00000438462 CSRNP2Q9H175 543 aa12.5□□□□□ -0.41
RTN4-211ENST00000438462 LY9Q9HBG7 655 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms