RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 HSP90AA2PQ14568 343 aaPredicted RBP9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 STK38Q15208 465 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 ZC2HC1CQ53FD0 456 aaPredicted RBP9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 KIAA0319Q5VV43 1072 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 FUT10Q6P4F1 479 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 SHC4Q6S5L8 630 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 DYMQ7RTS9 669 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 SFR1Q86XK3 245 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 SPNS2Q8IVW8 549 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 PDILTQ8N807 584 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 C12orf76Q8N812 135 aaPredicted RBP9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 C3orf58Q8NDZ4 430 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 RASSF8Q8NHQ8 419 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 FAM200AQ8TCP9 573 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 SUSD6Q92537 303 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 KLHL5Q96PQ7 755 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 FGFBP2Q9BYJ0 223 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 EPHX3Q9H6B9 360 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 PARVGQ9HBI0 331 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 CHST7Q9NS84 486 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 ANKFY1Q9P2R3 1169 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 ADAM28Q9UKQ2 775 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 SMIM28A0A1B0GU29 152 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 ANKRD63C9JTQ0 380 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 TEX28O15482 410 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 TOM1L1O75674 476 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 YEATS4O95619 227 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 PIGRP01833 764 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 THP07101 528 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 WEE2P0C1S8 567 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 TNFSF9P41273 254 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 GLUD2P49448 558 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 CASP5P51878 434 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 SMTNP53814 917 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 GTF2BQ00403 316 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 DSG1Q02413 1049 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 DNM1Q05193 864 aaKnown RBP9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 MCL1Q07820 350 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 NOLC1Q14978 699 aaKnown RBP eCLIP9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 SLC10A6Q3KNW5 377 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 PUS10Q3MIT2 529 aaKnown RBP9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 ARSIQ5FYB1 569 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 RTP2Q5QGT7 225 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 RRAGBQ5VZM2 374 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 PRSS55Q6UWB4 352 aaPredicted RBP9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 ZPBP2Q6X784 338 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 ADHFE1Q8IWW8 467 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 GJD3Q8N144 294 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 MYCT1Q8N699 235 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 STAMQ92783 540 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 C18orf25Q96B23 403 aaPredicted RBP9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 STRA6Q9BX79 667 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 ZHX3Q9H4I2 956 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 LARSQ9P2J5 1176 aaKnown RBP9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 TBX20Q9UMR3 447 aa9.34□□□□□ -0.91
HERPUD2-206ENST00000438224 FRMD3A2A2Y4 597 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 ANKRD33BA6NCL7 494 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 I3L4J1 428 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 ADAM12O43184 909 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 PPP6R2O75170 966 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 TBCAO75347 108 aaKnown RBP9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 KRT18P05783 430 aaKnown RBP9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 URODP06132 367 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 CXCL8P10145 99 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 MYBP10242 640 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 RPL17P18621 184 aaKnown RBP9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 VAMP1P23763 118 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 STAT6P42226 847 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 CLCN4P51793 760 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 CLCNKBP51801 687 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 SPAG1Q07617 926 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 STRN3Q13033 797 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 MMRN1Q13201 1228 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 RARS2Q5T160 578 aaKnown RBP9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 MAP4K3Q8IVH8 894 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 DEPDC4Q8N2C3 294 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 GLIS3Q8NEA6 775 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 ZSWIM2Q8NEG5 633 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 SREK1Q8WXA9 508 aaKnown RBP9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 CASP10Q92851 521 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 ZNF396Q96N95 335 aaPredicted RBP9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 TCHPQ9BT92 498 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 CCDC94Q9BW85 323 aaPredicted RBP9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 COLEC11Q9BWP8 271 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 RXFP1Q9HBX9 757 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 C11orf16Q9NQ32 467 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 MRPL17Q9NRX2 175 aaKnown RBP9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 TBC1D7Q9P0N9 293 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 CNTN3Q9P232 1028 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 CCDC39Q9UFE4 941 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 PRKAG3Q9UGI9 489 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 PCDHA7Q9UN72 937 aa9.33□□□□□ -0.92
HERPUD2-206ENST00000438224 MUC6Q6W4X9 2439 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 A0A0B4J269 797 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 TTC26A0AVF1 554 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 FSD2A1L4K1 749 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 LOC730098B7Z3J9 87 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 TMEM189-UBE2V1I3L0A0 370 aa9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 HNRNPDLO14979 420 aaKnown RBP9.32□□□□□ -0.92
HERPUD2-206ENST00000438224 CLDN3O15551 220 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms