RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 NOC2LQ9Y3T9 749 aaKnown RBP27.55■■■□□ 2
CPNE1-216ENST00000437340 ALG6Q9Y672 507 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 CCDC188H7C350 402 aa27.54■■■□□ 2
CPNE1-216ENST00000437340 PHKA2P46019 1235 aa27.54■■■□□ 2
CPNE1-216ENST00000437340 APLP1P51693 650 aa27.54■■■□□ 2
CPNE1-216ENST00000437340 DEFB115Q30KQ5 88 aa27.54■■■□□ 2
CPNE1-216ENST00000437340 SPOPLQ6IQ16 392 aa27.54■■■□□ 2
CPNE1-216ENST00000437340 CAPNS2Q96L46 248 aa27.54■■■□□ 2
CPNE1-216ENST00000437340 SLC15A5A6NIM6 579 aa27.53■■■□□ 2
CPNE1-216ENST00000437340 UNGP13051 313 aaPredicted RBP27.53■■■□□ 2
CPNE1-216ENST00000437340 HOXD8P13378 290 aaPredicted RBP27.53■■■□□ 2
CPNE1-216ENST00000437340 NOGQ13253 232 aa27.53■■■□□ 2
CPNE1-216ENST00000437340 PTPROQ16827 1216 aa27.53■■■□□ 2
CPNE1-216ENST00000437340 DUOXA2Q1HG44 320 aa27.53■■■□□ 2
CPNE1-216ENST00000437340 DUSP28Q4G0W2 176 aa27.53■■■□□ 2
CPNE1-216ENST00000437340 AENQ8WTP8 325 aaKnown RBP27.53■■■□□ 2
CPNE1-216ENST00000437340 KRT12Q99456 494 aa27.53■■■□□ 2
CPNE1-216ENST00000437340 C16orf70Q9BSU1 422 aa27.53■■■□□ 2
CPNE1-216ENST00000437340 ACBD3Q9H3P7 528 aa27.53■■■□□ 2
CPNE1-216ENST00000437340 SLC5A4Q9NY91 659 aa27.53■■■□□ 2
CPNE1-216ENST00000437340 ASS1P00966 412 aaKnown RBP27.53■■■□□ 2
CPNE1-216ENST00000437340 RNASE9P60153 205 aaKnown RBP27.53■■■□□ 2
CPNE1-216ENST00000437340 GABPB1Q06547 395 aaPredicted RBP27.53■■■□□ 2
CPNE1-216ENST00000437340 ZNF568Q3ZCX4 644 aa27.53■■■□□ 2
CPNE1-216ENST00000437340 IFT20Q8IY31 132 aa27.53■■■□□ 2
CPNE1-216ENST00000437340 ZNF653Q96CK0 615 aa27.53■■■□□ 2
CPNE1-216ENST00000437340 TINF2Q9BSI4 451 aa27.53■■■□□ 2
CPNE1-216ENST00000437340 ZSWIM8A7E2V4 1837 aa27.52■■■□□ 2
CPNE1-216ENST00000437340 GJB1P08034 283 aa27.52■■■□□ 2
CPNE1-216ENST00000437340 MYBL2P10244 700 aa27.52■■■□□ 2
CPNE1-216ENST00000437340 TMOD1P28289 359 aa27.52■■■□□ 2
CPNE1-216ENST00000437340 TRIM72Q6ZMU5 477 aa27.52■■■□□ 2
CPNE1-216ENST00000437340 TRIM11Q96F44 468 aa27.52■■■□□ 2
CPNE1-216ENST00000437340 IFT122Q9HBG6 1241 aa27.52■■■□□ 2
CPNE1-216ENST00000437340 GDF3Q9NR23 364 aa27.52■■■□□ 2
CPNE1-216ENST00000437340 NUB1Q9Y5A7 615 aa27.52■■■□□ 2
CPNE1-216ENST00000437340 MYBL1P10243 752 aa27.51■■□□□ 1.99
CPNE1-216ENST00000437340 IGBP1P78318 339 aa27.51■■□□□ 1.99
CPNE1-216ENST00000437340 SLC7A5Q01650 507 aa27.51■■□□□ 1.99
CPNE1-216ENST00000437340 POU5F1Q01860 360 aaKnown RBP27.51■■□□□ 1.99
CPNE1-216ENST00000437340 GLIPR1L2Q4G1C9 344 aa27.51■■□□□ 1.99
CPNE1-216ENST00000437340 IQSEC1Q6DN90 963 aa27.51■■□□□ 1.99
CPNE1-216ENST00000437340 PPP1R2P3Q6NXS1 205 aa27.51■■□□□ 1.99
CPNE1-216ENST00000437340 ZNF564Q8TBZ8 553 aaPredicted RBP27.51■■□□□ 1.99
CPNE1-216ENST00000437340 NAP1L3Q99457 506 aaPredicted RBP27.51■■□□□ 1.99
CPNE1-216ENST00000437340 NUP85Q9BW27 656 aa27.51■■□□□ 1.99
CPNE1-216ENST00000437340 PCDHB4Q9Y5E5 795 aa27.51■■□□□ 1.99
CPNE1-216ENST00000437340 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.5■■□□□ 1.99
CPNE1-216ENST00000437340 CA12O43570 354 aa27.5■■□□□ 1.99
CPNE1-216ENST00000437340 B4GALT4O60513 344 aa27.5■■□□□ 1.99
CPNE1-216ENST00000437340 CYP1A1P04798 512 aaPredicted RBP27.5■■□□□ 1.99
CPNE1-216ENST00000437340 IRF5Q13568 498 aa27.5■■□□□ 1.99
CPNE1-216ENST00000437340 ACVR2BQ13705 512 aa27.5■■□□□ 1.99
CPNE1-216ENST00000437340 UBL4BQ8N7F7 174 aa27.5■■□□□ 1.99
CPNE1-216ENST00000437340 AVENQ9NQS1 362 aaPredicted RBP27.5■■□□□ 1.99
CPNE1-216ENST00000437340 A0A0U1RQG5 324 aaPredicted RBP27.5■■□□□ 1.99
CPNE1-216ENST00000437340 H3BRB1 525 aa27.5■■□□□ 1.99
CPNE1-216ENST00000437340 HOXC6P09630 235 aa27.5■■□□□ 1.99
CPNE1-216ENST00000437340 SMPD1P17405 629 aa27.5■■□□□ 1.99
CPNE1-216ENST00000437340 EMBQ6PCB8 327 aa27.5■■□□□ 1.99
CPNE1-216ENST00000437340 MTMR12Q9C0I1 747 aa27.5■■□□□ 1.99
CPNE1-216ENST00000437340 TUT1Q9H6E5 874 aaKnown RBP27.5■■□□□ 1.99
CPNE1-216ENST00000437340 MINDY3Q9H8M7 445 aa27.5■■□□□ 1.99
CPNE1-216ENST00000437340 KRIT1O00522 736 aa27.49■■□□□ 1.99
CPNE1-216ENST00000437340 B4GALT5O43286 388 aa27.49■■□□□ 1.99
CPNE1-216ENST00000437340 HEXIM1O94992 359 aaKnown RBP27.49■■□□□ 1.99
CPNE1-216ENST00000437340 IL18RAPO95256 599 aa27.49■■□□□ 1.99
CPNE1-216ENST00000437340 ZNF286BP0CG31 522 aa27.49■■□□□ 1.99
CPNE1-216ENST00000437340 EPHB4P54760 987 aa27.49■■□□□ 1.99
CPNE1-216ENST00000437340 CENPCQ03188 943 aa27.49■■□□□ 1.99
CPNE1-216ENST00000437340 TMEM132AQ24JP5 1023 aa27.49■■□□□ 1.99
CPNE1-216ENST00000437340 SGSM1Q2NKQ1 1148 aa27.49■■□□□ 1.99
CPNE1-216ENST00000437340 TMEM270Q6UE05 265 aa27.49■■□□□ 1.99
CPNE1-216ENST00000437340 UBR7Q8N806 425 aa27.49■■□□□ 1.99
CPNE1-216ENST00000437340 ZBTB10Q96DT7 871 aa27.49■■□□□ 1.99
CPNE1-216ENST00000437340 WNT8AQ9H1J5 351 aa27.49■■□□□ 1.99
CPNE1-216ENST00000437340 CNOT8Q9UFF9 292 aaKnown RBP27.49■■□□□ 1.99
CPNE1-216ENST00000437340 CST3P01034 146 aaPredicted RBP27.48■■□□□ 1.99
CPNE1-216ENST00000437340 GLI1P08151 1106 aa27.48■■□□□ 1.99
CPNE1-216ENST00000437340 MMP3P08254 477 aa27.48■■□□□ 1.99
CPNE1-216ENST00000437340 TNNT3P45378 269 aaPredicted RBP27.48■■□□□ 1.99
CPNE1-216ENST00000437340 TNFAIP2Q03169 654 aa27.48■■□□□ 1.99
CPNE1-216ENST00000437340 MORN1Q5T089 497 aa27.48■■□□□ 1.99
CPNE1-216ENST00000437340 DCAF12L1Q5VU92 463 aa27.48■■□□□ 1.99
CPNE1-216ENST00000437340 MTHFD1LQ6UB35 978 aa27.48■■□□□ 1.99
CPNE1-216ENST00000437340 MCOLN2Q8IZK6 566 aa27.48■■□□□ 1.99
CPNE1-216ENST00000437340 RBBP8NLQ8NC74 664 aaPredicted RBP27.48■■□□□ 1.99
CPNE1-216ENST00000437340 CDT1Q9H211 546 aa27.48■■□□□ 1.99
CPNE1-216ENST00000437340 GNA15P30679 374 aa27.48■■□□□ 1.99
CPNE1-216ENST00000437340 PPP2R5EQ16537 467 aa27.48■■□□□ 1.99
CPNE1-216ENST00000437340 EEF1DP3Q658K8 133 aa27.48■■□□□ 1.99
CPNE1-216ENST00000437340 THNSL1Q8IYQ7 743 aa27.48■■□□□ 1.99
CPNE1-216ENST00000437340 EIF1ADQ8N9N8 165 aaKnown RBP27.48■■□□□ 1.99
CPNE1-216ENST00000437340 NPLOC4Q8TAT6 608 aa27.48■■□□□ 1.99
CPNE1-216ENST00000437340 FAM212AQ96EL1 285 aa27.48■■□□□ 1.99
CPNE1-216ENST00000437340 ANKRD36BP1Q96IX9 119 aa27.48■■□□□ 1.99
CPNE1-216ENST00000437340 ZNF668Q96K58 619 aaPredicted RBP27.48■■□□□ 1.99
CPNE1-216ENST00000437340 ZSWIM1Q9BR11 485 aa27.48■■□□□ 1.99
CPNE1-216ENST00000437340 SLITRK6Q9H5Y7 841 aa27.48■■□□□ 1.99
CPNE1-216ENST00000437340 AKT3Q9Y243 479 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms