RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 PSMB7Q99436 277 aa22.69■■□□□ 1.22
PTPRF-207ENST00000436724 GOLPH3Q9H4A6 298 aa22.69■■□□□ 1.22
PTPRF-207ENST00000436724 A0A1B0GUA9 196 aa22.68■■□□□ 1.22
PTPRF-207ENST00000436724 ZNF185O15231 689 aa22.68■■□□□ 1.22
PTPRF-207ENST00000436724 TRPA1O75762 1119 aa22.68■■□□□ 1.22
PTPRF-207ENST00000436724 CXCL17Q6UXB2 119 aa22.68■■□□□ 1.22
PTPRF-207ENST00000436724 ENOSF1Q7L5Y1 443 aa22.68■■□□□ 1.22
PTPRF-207ENST00000436724 LACTBL1A8MY62 500 aa22.67■■□□□ 1.22
PTPRF-207ENST00000436724 B4GALT4O60513 344 aa22.67■■□□□ 1.22
PTPRF-207ENST00000436724 FTCDO95954 541 aa22.67■■□□□ 1.22
PTPRF-207ENST00000436724 NFICP08651 508 aa22.67■■□□□ 1.22
PTPRF-207ENST00000436724 CLTAP09496 248 aa22.67■■□□□ 1.22
PTPRF-207ENST00000436724 TMEM191BP0C7N4 346 aa22.67■■□□□ 1.22
PTPRF-207ENST00000436724 NOP2P46087 812 aaKnown RBP22.67■■□□□ 1.22
PTPRF-207ENST00000436724 AP3M2P53677 418 aa22.67■■□□□ 1.22
PTPRF-207ENST00000436724 FMO1Q01740 532 aa22.67■■□□□ 1.22
PTPRF-207ENST00000436724 GABPB1Q06547 395 aaPredicted RBP22.67■■□□□ 1.22
PTPRF-207ENST00000436724 SURF1Q15526 300 aa22.67■■□□□ 1.22
PTPRF-207ENST00000436724 C7orf31Q8N865 590 aa22.67■■□□□ 1.22
PTPRF-207ENST00000436724 TMEM40Q8WWA1 233 aa22.67■■□□□ 1.22
PTPRF-207ENST00000436724 CAPZA3Q96KX2 299 aa22.67■■□□□ 1.22
PTPRF-207ENST00000436724 KATNAL1Q9BW62 490 aa22.67■■□□□ 1.22
PTPRF-207ENST00000436724 PCDHGC5Q9Y5F6 944 aa22.67■■□□□ 1.22
PTPRF-207ENST00000436724 GRID2IPA4D2P6 1211 aa22.67■■□□□ 1.22
PTPRF-207ENST00000436724 BTNL10A8MVZ5 291 aa22.67■■□□□ 1.22
PTPRF-207ENST00000436724 ASS1P00966 412 aaKnown RBP22.67■■□□□ 1.22
PTPRF-207ENST00000436724 HOXA11P31270 313 aaPredicted RBP22.67■■□□□ 1.22
PTPRF-207ENST00000436724 PDE6CP51160 858 aa22.67■■□□□ 1.22
PTPRF-207ENST00000436724 GJA9P57773 515 aa22.67■■□□□ 1.22
PTPRF-207ENST00000436724 DDX1Q92499 740 aaKnown RBP22.67■■□□□ 1.22
PTPRF-207ENST00000436724 GCOM2Q9BZD3 368 aaPredicted RBP22.67■■□□□ 1.22
PTPRF-207ENST00000436724 THAP2Q9H0W7 228 aa22.67■■□□□ 1.22
PTPRF-207ENST00000436724 ARGLU1Q9NWB6 273 aaPredicted RBP22.67■■□□□ 1.22
PTPRF-207ENST00000436724 C17orf102A2RUQ5 167 aa22.66■■□□□ 1.22
PTPRF-207ENST00000436724 MYCNP04198 464 aaPredicted RBP22.66■■□□□ 1.22
PTPRF-207ENST00000436724 ACO1P21399 889 aaKnown RBP22.66■■□□□ 1.22
PTPRF-207ENST00000436724 CCND3P30281 292 aaPredicted RBP22.66■■□□□ 1.22
PTPRF-207ENST00000436724 CXCR5P32302 372 aa22.66■■□□□ 1.22
PTPRF-207ENST00000436724 SLC10A6Q3KNW5 377 aa22.66■■□□□ 1.22
PTPRF-207ENST00000436724 GPR161Q8N6U8 529 aaKnown RBP22.66■■□□□ 1.22
PTPRF-207ENST00000436724 ARHGEF26Q96DR7 871 aa22.66■■□□□ 1.22
PTPRF-207ENST00000436724 TLR10Q9BXR5 811 aa22.66■■□□□ 1.22
PTPRF-207ENST00000436724 OSGEPQ9NPF4 335 aa22.66■■□□□ 1.22
PTPRF-207ENST00000436724 PACSIN2Q9UNF0 486 aaPredicted RBP22.66■■□□□ 1.22
PTPRF-207ENST00000436724 SEPT4O43236 478 aa22.66■■□□□ 1.22
PTPRF-207ENST00000436724 TUBB2AQ13885 445 aa22.66■■□□□ 1.22
PTPRF-207ENST00000436724 PTPROQ16827 1216 aa22.66■■□□□ 1.22
PTPRF-207ENST00000436724 JADE1Q6IE81 842 aa22.66■■□□□ 1.22
PTPRF-207ENST00000436724 CATSPER4Q7RTX7 472 aa22.66■■□□□ 1.22
PTPRF-207ENST00000436724 TUBB2BQ9BVA1 445 aa22.66■■□□□ 1.22
PTPRF-207ENST00000436724 IMPG2Q9BZV3 1241 aa22.66■■□□□ 1.22
PTPRF-207ENST00000436724 INTUQ9ULD6 942 aa22.66■■□□□ 1.22
PTPRF-207ENST00000436724 SNX12Q9UMY4 172 aa22.66■■□□□ 1.22
PTPRF-207ENST00000436724 FTLP02792 175 aaPredicted RBP22.65■■□□□ 1.22
PTPRF-207ENST00000436724 TMEM270Q6UE05 265 aa22.65■■□□□ 1.22
PTPRF-207ENST00000436724 TMCO3Q6UWJ1 677 aa22.65■■□□□ 1.22
PTPRF-207ENST00000436724 CREBZFQ9NS37 354 aa22.65■■□□□ 1.22
PTPRF-207ENST00000436724 IL18RAPO95256 599 aa22.65■■□□□ 1.22
PTPRF-207ENST00000436724 DARSP14868 501 aaKnown RBP22.65■■□□□ 1.22
PTPRF-207ENST00000436724 DNA2P51530 1060 aa22.65■■□□□ 1.22
PTPRF-207ENST00000436724 CDR2Q01850 454 aa22.65■■□□□ 1.22
PTPRF-207ENST00000436724 TRPC3Q13507 836 aa22.65■■□□□ 1.22
PTPRF-207ENST00000436724 WHAMMP3Q1A5X7 153 aa22.65■■□□□ 1.22
PTPRF-207ENST00000436724 TEX35Q5T0J7 233 aa22.65■■□□□ 1.22
PTPRF-207ENST00000436724 COG1Q8WTW3 980 aa22.65■■□□□ 1.22
PTPRF-207ENST00000436724 CTNNBL1Q8WYA6 563 aaPredicted RBP22.65■■□□□ 1.22
PTPRF-207ENST00000436724 ANKRD36BP1Q96IX9 119 aa22.65■■□□□ 1.22
PTPRF-207ENST00000436724 FAM81BQ96LP2 452 aa22.65■■□□□ 1.22
PTPRF-207ENST00000436724 ADPGKQ9BRR6 497 aa22.65■■□□□ 1.22
PTPRF-207ENST00000436724 PCDHB4Q9Y5E5 795 aa22.65■■□□□ 1.22
PTPRF-207ENST00000436724 TNNC2P02585 160 aa22.64■■□□□ 1.21
PTPRF-207ENST00000436724 KRT19P08727 400 aa22.64■■□□□ 1.21
PTPRF-207ENST00000436724 TMEM253P0C7T8 217 aa22.64■■□□□ 1.21
PTPRF-207ENST00000436724 RARBP10826 455 aa22.64■■□□□ 1.21
PTPRF-207ENST00000436724 PRKAR2AP13861 404 aaKnown RBP22.64■■□□□ 1.21
PTPRF-207ENST00000436724 CEP112Q8N8E3 955 aa22.64■■□□□ 1.21
PTPRF-207ENST00000436724 SLC35G2Q8TBE7 412 aa22.64■■□□□ 1.21
PTPRF-207ENST00000436724 RABGGTAQ92696 567 aa22.64■■□□□ 1.21
PTPRF-207ENST00000436724 EIF2AQ9BY44 585 aaKnown RBP22.64■■□□□ 1.21
PTPRF-207ENST00000436724 ISCUQ9H1K1 167 aa22.64■■□□□ 1.21
PTPRF-207ENST00000436724 CXCL16Q9H2A7 254 aa22.64■■□□□ 1.21
PTPRF-207ENST00000436724 CHORDC1Q9UHD1 332 aaPredicted RBP22.64■■□□□ 1.21
PTPRF-207ENST00000436724 ATP8B3O60423 1300 aa22.64■■□□□ 1.21
PTPRF-207ENST00000436724 NPTXRO95502 500 aa22.63■■□□□ 1.21
PTPRF-207ENST00000436724 EIF4BP23588 611 aaKnown RBP22.63■■□□□ 1.21
PTPRF-207ENST00000436724 HOXC8P31273 242 aa22.63■■□□□ 1.21
PTPRF-207ENST00000436724 PLA2G4AP47712 749 aa22.63■■□□□ 1.21
PTPRF-207ENST00000436724 C1orf127Q8N9H9 656 aa22.63■■□□□ 1.21
PTPRF-207ENST00000436724 TPCN2Q8NHX9 752 aa22.63■■□□□ 1.21
PTPRF-207ENST00000436724 CD99L2Q8TCZ2 262 aa22.63■■□□□ 1.21
PTPRF-207ENST00000436724 MMS19Q96T76 1030 aa22.63■■□□□ 1.21
PTPRF-207ENST00000436724 XYLT2Q9H1B5 865 aa22.63■■□□□ 1.21
PTPRF-207ENST00000436724 ST7Q9NRC1 585 aa22.63■■□□□ 1.21
PTPRF-207ENST00000436724 SIX4Q9UIU6 781 aa22.63■■□□□ 1.21
PTPRF-207ENST00000436724 ANKRD62A6NC57 917 aa22.63■■□□□ 1.21
PTPRF-207ENST00000436724 SEC31AO94979 1220 aaKnown RBP22.63■■□□□ 1.21
PTPRF-207ENST00000436724 TBXAS1P24557 533 aaPredicted RBP22.63■■□□□ 1.21
PTPRF-207ENST00000436724 CDC42EP1Q00587 391 aa22.63■■□□□ 1.21
PTPRF-207ENST00000436724 SNX17Q15036 470 aa22.63■■□□□ 1.21
PTPRF-207ENST00000436724 SGSM1Q2NKQ1 1148 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms