RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 NT5C1BQ96P26 610 aa24.81■■□□□ 1.56
CPSF4-204ENST00000436336 RSAD1Q9HA92 442 aa24.81■■□□□ 1.56
CPSF4-204ENST00000436336 ENPP3O14638 875 aa24.8■■□□□ 1.56
CPSF4-204ENST00000436336 CST3P01034 146 aaPredicted RBP24.8■■□□□ 1.56
CPSF4-204ENST00000436336 TRPC3Q13507 836 aa24.8■■□□□ 1.56
CPSF4-204ENST00000436336 WDR44Q5JSH3 913 aa24.8■■□□□ 1.56
CPSF4-204ENST00000436336 GLRA4Q5JXX5 417 aa24.8■■□□□ 1.56
CPSF4-204ENST00000436336 PHLDB3Q6NSJ2 640 aa24.8■■□□□ 1.56
CPSF4-204ENST00000436336 BEST2Q8NFU1 509 aa24.8■■□□□ 1.56
CPSF4-204ENST00000436336 RPS6KC1Q96S38 1066 aa24.8■■□□□ 1.56
CPSF4-204ENST00000436336 DPP3Q9NY33 737 aa24.8■■□□□ 1.56
CPSF4-204ENST00000436336 ITGA11Q9UKX5 1188 aa24.8■■□□□ 1.56
CPSF4-204ENST00000436336 FHOD1Q9Y613 1164 aa24.8■■□□□ 1.56
CPSF4-204ENST00000436336 TTC3P53804 2025 aa24.8■■□□□ 1.56
CPSF4-204ENST00000436336 ITGB8P26012 769 aa24.79■■□□□ 1.56
CPSF4-204ENST00000436336 MLH1P40692 756 aa24.79■■□□□ 1.56
CPSF4-204ENST00000436336 GOLGA8FQ08AF8 430 aa24.79■■□□□ 1.56
CPSF4-204ENST00000436336 GOLGA8DPQ0D2H9 430 aa24.79■■□□□ 1.56
CPSF4-204ENST00000436336 ARID5BQ14865 1188 aa24.79■■□□□ 1.56
CPSF4-204ENST00000436336 MFSD5Q6N075 450 aa24.79■■□□□ 1.56
CPSF4-204ENST00000436336 CNKSR3Q6P9H4 555 aa24.79■■□□□ 1.56
CPSF4-204ENST00000436336 RNF169Q8NCN4 708 aa24.79■■□□□ 1.56
CPSF4-204ENST00000436336 GAD1Q99259 594 aa24.79■■□□□ 1.56
CPSF4-204ENST00000436336 NAA15Q9BXJ9 866 aaKnown RBP24.79■■□□□ 1.56
CPSF4-204ENST00000436336 IMPG2Q9BZV3 1241 aa24.79■■□□□ 1.56
CPSF4-204ENST00000436336 ELAC1Q9H777 363 aaKnown RBP24.79■■□□□ 1.56
CPSF4-204ENST00000436336 NLRC4Q9NPP4 1024 aa24.79■■□□□ 1.56
CPSF4-204ENST00000436336 ITGB3P05106 788 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 CYP3A5P20815 502 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 LRMPQ12912 555 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 TCTN1Q2MV58 587 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 SGSM1Q2NKQ1 1148 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 IQCEQ6IPM2 695 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 LRRC8AQ8IWT6 810 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 TMEM199Q8N511 208 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 BAP1Q92560 729 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 ZFP42Q96MM3 310 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 PI4K2AQ9BTU6 479 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 ABHD10Q9NUJ1 306 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 SIX4Q9UIU6 781 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 DNAJC12Q9UKB3 198 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.78■■□□□ 1.56
CPSF4-204ENST00000436336 ARL5CA6NH57 179 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 PTGESO14684 152 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 KRT19P08727 400 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 GJB7Q6PEY0 223 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 ARHGEF19Q8IW93 802 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 GSTCDQ8NEC7 633 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 OR8K1Q8NGG5 319 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 CXorf38Q8TB03 319 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 FAM81BQ96LP2 452 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 PANX2Q96RD6 677 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 NUCKS1Q9H1E3 243 aaKnown RBP24.78■■□□□ 1.56
CPSF4-204ENST00000436336 TMEM161AQ9NX61 479 aa24.78■■□□□ 1.56
CPSF4-204ENST00000436336 R3HCC1Q9Y3T6 440 aaKnown RBP24.78■■□□□ 1.56
CPSF4-204ENST00000436336 ASS1P00966 412 aaKnown RBP24.77■■□□□ 1.56
CPSF4-204ENST00000436336 IBSPP21815 317 aaPredicted RBP24.77■■□□□ 1.56
CPSF4-204ENST00000436336 MYL6P60660 151 aa24.77■■□□□ 1.56
CPSF4-204ENST00000436336 TAF4BQ92750 862 aa24.77■■□□□ 1.56
CPSF4-204ENST00000436336 TRIM44Q96DX7 344 aaPredicted RBP24.77■■□□□ 1.56
CPSF4-204ENST00000436336 PPP1R10Q96QC0 940 aaKnown RBP24.77■■□□□ 1.56
CPSF4-204ENST00000436336 DNAJC7Q99615 494 aa24.77■■□□□ 1.56
CPSF4-204ENST00000436336 UBE2TQ9NPD8 197 aaPredicted RBP24.77■■□□□ 1.56
CPSF4-204ENST00000436336 SLC38A7Q9NVC3 462 aa24.77■■□□□ 1.56
CPSF4-204ENST00000436336 PRKAG2Q9UGJ0 569 aa24.77■■□□□ 1.56
CPSF4-204ENST00000436336 TUBGCP4Q9UGJ1 667 aa24.77■■□□□ 1.56
CPSF4-204ENST00000436336 MYO6Q9UM54 1294 aa24.77■■□□□ 1.56
CPSF4-204ENST00000436336 SCN1AP35498 2009 aa24.77■■□□□ 1.56
CPSF4-204ENST00000436336 INPPL1O15357 1258 aa24.76■■□□□ 1.55
CPSF4-204ENST00000436336 ATICP31939 592 aa24.76■■□□□ 1.55
CPSF4-204ENST00000436336 NOP14P78316 857 aaKnown RBP24.76■■□□□ 1.55
CPSF4-204ENST00000436336 RBP5P82980 135 aa24.76■■□□□ 1.55
CPSF4-204ENST00000436336 IKBKEQ14164 716 aa24.76■■□□□ 1.55
CPSF4-204ENST00000436336 SCARA3Q6AZY7 606 aa24.76■■□□□ 1.55
CPSF4-204ENST00000436336 PDXDC1Q6P996 788 aa24.76■■□□□ 1.55
CPSF4-204ENST00000436336 RRAGAQ7L523 313 aa24.76■■□□□ 1.55
CPSF4-204ENST00000436336 PPM1KQ8N3J5 372 aa24.76■■□□□ 1.55
CPSF4-204ENST00000436336 HELQQ8TDG4 1101 aa24.76■■□□□ 1.55
CPSF4-204ENST00000436336 C18orf25Q96B23 403 aaPredicted RBP24.76■■□□□ 1.55
CPSF4-204ENST00000436336 VWCEQ96DN2 955 aa24.76■■□□□ 1.55
CPSF4-204ENST00000436336 SPAG5Q96R06 1193 aa24.76■■□□□ 1.55
CPSF4-204ENST00000436336 STK33Q9BYT3 514 aa24.76■■□□□ 1.55
CPSF4-204ENST00000436336 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.76■■□□□ 1.553e-7■■■■■ 76.5
CPSF4-204ENST00000436336 RNF19AQ9NV58 838 aa24.76■■□□□ 1.55
CPSF4-204ENST00000436336 RNF216Q9NWF9 866 aaPredicted RBP24.76■■□□□ 1.55
CPSF4-204ENST00000436336 AJAP1Q9UKB5 411 aaPredicted RBP24.76■■□□□ 1.55
CPSF4-204ENST00000436336 LRRC53A6NM62 1247 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 THP07101 528 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 PFKMP08237 780 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 POLR2BP30876 1174 aaKnown RBP24.75■■□□□ 1.55
CPSF4-204ENST00000436336 GUCY2FP51841 1108 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 GCNT1Q02742 428 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 RAPGEF1Q13905 1077 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 TSR1Q2NL82 804 aaKnown RBP24.75■■□□□ 1.55
CPSF4-204ENST00000436336 HS1BP3Q53T59 392 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 RPUSD2Q8IZ73 545 aaKnown RBP24.75■■□□□ 1.55
CPSF4-204ENST00000436336 TATDN2Q93075 761 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 ABHD8Q96I13 439 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 AGAP1Q9UPQ3 857 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms