RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 THADAQ6YHU6 1953 aa11.57□□□□□ -0.56
CPNE1-214ENST00000435747 IGKV6-21A0A0C4DH24 114 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 SPAARA0A1B0GVQ0 90 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 BCLAF3A2AJT9 711 aaKnown RBP11.56□□□□□ -0.56
CPNE1-214ENST00000435747 CDX4O14627 284 aaPredicted RBP11.56□□□□□ -0.56
CPNE1-214ENST00000435747 EXTL3O43909 919 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 GAS7O60861 476 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 OATP04181 439 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 ITGA4P13612 1032 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 SFNP31947 248 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 KPNA1P52294 538 aaPredicted RBP11.56□□□□□ -0.56
CPNE1-214ENST00000435747 JAK3P52333 1124 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 MLLT6P55198 1093 aaPredicted RBP11.56□□□□□ -0.56
CPNE1-214ENST00000435747 PRKCEQ02156 737 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 DRP2Q13474 957 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 INF2Q27J81 1249 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 UVSSAQ2YD98 709 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 LRCH2Q5VUJ6 765 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 CPLX2Q6PUV4 134 aaKnown RBP11.56□□□□□ -0.56
CPNE1-214ENST00000435747 POTEHQ6S545 545 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 VITQ6UXI7 678 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 KRT25Q7Z3Z0 450 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 ZNF605Q86T29 641 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 ZNF410Q86VK4 478 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 CHCHD4Q8N4Q1 142 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 RDM1Q8NG50 284 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 FAM200AQ8TCP9 573 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 GTF3C6Q969F1 213 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 TEKT3Q9BXF9 490 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 NIFKQ9BYG3 293 aaKnown RBP11.56□□□□□ -0.56
CPNE1-214ENST00000435747 DUSP15Q9H1R2 295 aaPredicted RBP11.56□□□□□ -0.56
CPNE1-214ENST00000435747 SLKQ9H2G2 1235 aaPredicted RBP11.56□□□□□ -0.56
CPNE1-214ENST00000435747 C8orf33Q9H7E9 229 aaPredicted RBP11.56□□□□□ -0.56
CPNE1-214ENST00000435747 SCUBE2Q9NQ36 999 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 VAV3Q9UKW4 847 aa11.56□□□□□ -0.56
CPNE1-214ENST00000435747 GOLGA4Q13439 2230 aaKnown RBP11.55□□□□□ -0.56
CPNE1-214ENST00000435747 FAM205CA6NFA0 338 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 ARL5CA6NH57 179 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 EML1O00423 815 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 TADA2AO75478 443 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 CDKL5O76039 1030 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 MLH1P40692 756 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 DNM2P50570 870 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 SCNN1GP51170 649 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 SPIRE1Q08AE8 756 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 PSMD5Q16401 504 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 WDR44Q5JSH3 913 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 PPP4R3AQ6IN85 833 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 SYNPOQ8N3V7 929 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 CNNM3Q8NE01 707 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 NSUN7Q8NE18 718 aaKnown RBP11.55□□□□□ -0.56
CPNE1-214ENST00000435747 HAS1Q92839 578 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 ASB16Q96NS5 453 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 UBL7Q96S82 380 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-214ENST00000435747 GAD1Q99259 594 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 KIF2CQ99661 725 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 TTPALQ9BTX7 342 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 AVENQ9NQS1 362 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-214ENST00000435747 SLC8A2Q9UPR5 921 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 SAMM50Q9Y512 469 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 RAI2Q9Y5P3 530 aa11.55□□□□□ -0.56
CPNE1-214ENST00000435747 SF3B1O75533 1304 aaKnown RBP eCLIP11.55□□□□□ -0.566e-7■■■■■ 71.8
CPNE1-214ENST00000435747 VWA8A3KMH1 1905 aa11.54□□□□□ -0.56
CPNE1-214ENST00000435747 TMEM150BA6NC51 233 aa11.54□□□□□ -0.56
CPNE1-214ENST00000435747 SLC38A8A6NNN8 435 aa11.54□□□□□ -0.56
CPNE1-214ENST00000435747 CHMP2AO43633 222 aa11.54□□□□□ -0.56
CPNE1-214ENST00000435747 C1QL1O75973 258 aa11.54□□□□□ -0.56
CPNE1-214ENST00000435747 SOX9P48436 509 aa11.54□□□□□ -0.56
CPNE1-214ENST00000435747 PPP2R5CQ13362 524 aa11.54□□□□□ -0.56
CPNE1-214ENST00000435747 ANKRD1Q15327 319 aa11.54□□□□□ -0.56
CPNE1-214ENST00000435747 ANO5Q75V66 913 aa11.54□□□□□ -0.56
CPNE1-214ENST00000435747 RTL10Q7L3V2 364 aa11.54□□□□□ -0.56
CPNE1-214ENST00000435747 NEK8Q86SG6 692 aa11.54□□□□□ -0.56
CPNE1-214ENST00000435747 CEP57Q86XR8 500 aa11.54□□□□□ -0.56
CPNE1-214ENST00000435747 RHPN2Q8IUC4 686 aa11.54□□□□□ -0.56
CPNE1-214ENST00000435747 NECAB1Q8N987 351 aa11.54□□□□□ -0.56
CPNE1-214ENST00000435747 PIK3R5Q8WYR1 880 aa11.54□□□□□ -0.56
CPNE1-214ENST00000435747 SLC39A7Q92504 469 aa11.54□□□□□ -0.56
CPNE1-214ENST00000435747 SMARCD2Q92925 531 aa11.54□□□□□ -0.56
CPNE1-214ENST00000435747 NLRP4Q96MN2 994 aa11.54□□□□□ -0.56
CPNE1-214ENST00000435747 HNRNPABQ99729 332 aaKnown RBP11.54□□□□□ -0.56
CPNE1-214ENST00000435747 MIOSQ9NXC5 875 aa11.54□□□□□ -0.56
CPNE1-214ENST00000435747 WRAP73Q9P2S5 460 aaPredicted RBP11.54□□□□□ -0.56
CPNE1-214ENST00000435747 ORC3Q9UBD5 711 aaPredicted RBP11.54□□□□□ -0.56
CPNE1-214ENST00000435747 DDX25Q9UHL0 483 aaKnown RBP11.54□□□□□ -0.56
CPNE1-214ENST00000435747 RAXQ9Y2V3 346 aa11.54□□□□□ -0.56
CPNE1-214ENST00000435747 ARID2Q68CP9 1835 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 PLXNB3Q9ULL4 1909 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 SPECC1L-ADORA2AF8WAN1 911 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 TK2O00142 265 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 ARNTLO00327 626 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 WNT7AO00755 349 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 NRG2O14511 850 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-214ENST00000435747 TBX3O15119 743 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 ADAM12O43184 909 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 PTPN2P17706 415 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 VIPR2P41587 438 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 NR5A1Q13285 461 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 CCINQ13939 588 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 KARSQ15046 597 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms