RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 DPH6Q7L8W6 267 aa11.12□□□□□ -0.63
SCAF4-203ENST00000434667 TTC7BQ86TV6 843 aa11.12□□□□□ -0.63
SCAF4-203ENST00000434667 CCHCR1Q8TD31 782 aa11.12□□□□□ -0.63
SCAF4-203ENST00000434667 TSC22D3Q99576 134 aa11.12□□□□□ -0.63
SCAF4-203ENST00000434667 VPS37BQ9H9H4 285 aa11.12□□□□□ -0.63
SCAF4-203ENST00000434667 A6NHS1 94 aa11.12□□□□□ -0.63
SCAF4-203ENST00000434667 CALB2P22676 271 aa11.12□□□□□ -0.63
SCAF4-203ENST00000434667 DRG2P55039 364 aaKnown RBP11.12□□□□□ -0.63
SCAF4-203ENST00000434667 GABPAQ06546 454 aa11.12□□□□□ -0.63
SCAF4-203ENST00000434667 P3H1Q32P28 736 aa11.12□□□□□ -0.63
SCAF4-203ENST00000434667 C1orf220Q5T0J3 134 aa11.12□□□□□ -0.63
SCAF4-203ENST00000434667 CD101Q93033 1021 aa11.12□□□□□ -0.63
SCAF4-203ENST00000434667 SCAF8Q9UPN6 1271 aaKnown RBP11.12□□□□□ -0.63
SCAF4-203ENST00000434667 SLC4A7Q9Y6M7 1214 aa11.12□□□□□ -0.63
SCAF4-203ENST00000434667 WASF2Q9Y6W5 498 aa11.12□□□□□ -0.63
SCAF4-203ENST00000434667 EXOC1LA0A1B0GW35 172 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 LRRD1A4D1F6 860 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 DDTLA6NHG4 134 aaPredicted RBP11.11□□□□□ -0.63
SCAF4-203ENST00000434667 RCN2Q14257 317 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 MFSD5Q6N075 450 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 ZC3H18Q86VM9 953 aaKnown RBP11.11□□□□□ -0.63
SCAF4-203ENST00000434667 RHOT2Q8IXI1 618 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 SLFN12Q8IYM2 578 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 DAW1Q8N136 415 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 STMN2Q93045 179 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 RBM15Q96T37 977 aaKnown RBP eCLIP11.11□□□□□ -0.633e-12■■■■□ 25
SCAF4-203ENST00000434667 BATF3Q9NR55 127 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 SLC16A3O15427 465 aaKnown RBP11.11□□□□□ -0.63
SCAF4-203ENST00000434667 EYA4O95677 639 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 ADRB2P07550 413 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 ETS2P15036 469 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 KIF22Q14807 665 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 KPNB1Q14974 876 aaKnown RBP11.11□□□□□ -0.63
SCAF4-203ENST00000434667 RCN1Q15293 331 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 MAPK6Q16659 721 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 FOXB2Q5VYV0 432 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 C15orf52Q6ZUT6 534 aaKnown RBP11.11□□□□□ -0.63
SCAF4-203ENST00000434667 FBXO27Q8NI29 283 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 STK32AQ8WU08 396 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 WDR60Q8WVS4 1066 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 JDP2Q8WYK2 163 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 ABTB1Q969K4 478 aaPredicted RBP11.11□□□□□ -0.63
SCAF4-203ENST00000434667 MKNK1Q9BUB5 465 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 PAPOLBQ9NRJ5 636 aaKnown RBP11.11□□□□□ -0.63
SCAF4-203ENST00000434667 LRRC4BQ9NT99 713 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 NMRK1Q9NWW6 199 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 CYP39A1Q9NYL5 469 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 ADRA1DP25100 572 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 GCAP28676 217 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 MAPK4P31152 587 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 VAMP7P51809 220 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 POLGP54098 1239 aaPredicted RBP11.11□□□□□ -0.63
SCAF4-203ENST00000434667 ORC2Q13416 577 aaPredicted RBP11.11□□□□□ -0.63
SCAF4-203ENST00000434667 GRAPQ13588 217 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 PCNX4Q63HM2 1172 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 RHBDF2Q6PJF5 856 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 BTNL9Q6UXG8 535 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 SLC25A41Q8N5S1 370 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 GRAPLQ8TC17 118 aaPredicted RBP11.11□□□□□ -0.63
SCAF4-203ENST00000434667 PSPC1Q8WXF1 523 aaKnown RBP11.11□□□□□ -0.63
SCAF4-203ENST00000434667 CLPTM1LQ96KA5 538 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 MAGEB18Q96M61 343 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 SERPINB12Q96P63 405 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 STMN4Q9H169 189 aaPredicted RBP11.11□□□□□ -0.63
SCAF4-203ENST00000434667 KIAA1586Q9HCI6 787 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 PLIN4Q96Q06 1357 aa11.11□□□□□ -0.63
SCAF4-203ENST00000434667 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.1□□□□□ -0.63
SCAF4-203ENST00000434667 TAS2R40P59535 323 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 OTOAQ7RTW8 1153 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 SIAH1Q8IUQ4 282 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 SNF8Q96H20 258 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 MAK16Q9BXY0 300 aaKnown RBP11.1□□□□□ -0.63
SCAF4-203ENST00000434667 TRABDQ9H4I3 376 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 ARL8BQ9NVJ2 186 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 CYP3A7-CYP3A51PA0A087WV96 503 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 IGKV6D-41A0A0C4DH26 115 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 SLC16A4O15374 487 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 PLS3P13797 630 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 CCNB1P14635 433 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 ATF7P17544 494 aaPredicted RBP11.1□□□□□ -0.63
SCAF4-203ENST00000434667 RASA3Q14644 834 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 PSMD6Q15008 389 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 SPOPLQ6IQ16 392 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 LRRC6Q86X45 466 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 TAS1R2Q8TE23 839 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 DNAJC9Q8WXX5 260 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 TRIM4Q9C037 500 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 ZNF395Q9H8N7 513 aaPredicted RBP11.1□□□□□ -0.63
SCAF4-203ENST00000434667 PARP2Q9UGN5 583 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 NOCTQ9UK39 431 aaKnown RBP11.1□□□□□ -0.63
SCAF4-203ENST00000434667 FAM47DPA6NHR8 397 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 OPHN1O60890 802 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 BCRP11274 1271 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 NEK3P51956 506 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 DYNLT1P63172 113 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 ZNF568Q3ZCX4 644 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 CFAP157Q5JU67 520 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 LVRNQ6Q4G3 990 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 ARHGEF18Q6ZSZ5 1173 aa11.1□□□□□ -0.63
SCAF4-203ENST00000434667 TRMT10CQ7L0Y3 403 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms