RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 PLAGL2Q9UPG8 496 aa25.07■■□□□ 1.6
SMARCAL1-208ENST00000434435 CEP290O15078 2479 aa25.07■■□□□ 1.6
SMARCAL1-208ENST00000434435 POMCP01189 267 aa25.06■■□□□ 1.6
SMARCAL1-208ENST00000434435 CYP3A5P20815 502 aa25.06■■□□□ 1.6
SMARCAL1-208ENST00000434435 NR1I3Q14994 352 aa25.06■■□□□ 1.6
SMARCAL1-208ENST00000434435 TRAPPC11Q7Z392 1133 aa25.06■■□□□ 1.6
SMARCAL1-208ENST00000434435 C18orf25Q96B23 403 aaPredicted RBP25.06■■□□□ 1.6
SMARCAL1-208ENST00000434435 SLC9A7Q96T83 725 aa25.06■■□□□ 1.6
SMARCAL1-208ENST00000434435 MRPL9Q9BYD2 267 aaKnown RBP25.06■■□□□ 1.6
SMARCAL1-208ENST00000434435 DPP3Q9NY33 737 aa25.06■■□□□ 1.6
SMARCAL1-208ENST00000434435 TUBGCP4Q9UGJ1 667 aa25.06■■□□□ 1.6
SMARCAL1-208ENST00000434435 ITGA11Q9UKX5 1188 aa25.06■■□□□ 1.6
SMARCAL1-208ENST00000434435 TEX33O43247 280 aa25.05■■□□□ 1.6
SMARCAL1-208ENST00000434435 PIK3CAP42336 1068 aa25.05■■□□□ 1.6
SMARCAL1-208ENST00000434435 GATMP50440 423 aa25.05■■□□□ 1.6
SMARCAL1-208ENST00000434435 GBP6Q6ZN66 633 aa25.05■■□□□ 1.6
SMARCAL1-208ENST00000434435 C1orf127Q8N9H9 656 aa25.05■■□□□ 1.6
SMARCAL1-208ENST00000434435 CASD1Q96PB1 797 aa25.05■■□□□ 1.6
SMARCAL1-208ENST00000434435 SLC4A7Q9Y6M7 1214 aa25.05■■□□□ 1.6
SMARCAL1-208ENST00000434435 TBKBP1A7MCY6 615 aa25.04■■□□□ 1.6
SMARCAL1-208ENST00000434435 DGKIO75912 1065 aa25.04■■□□□ 1.6
SMARCAL1-208ENST00000434435 GUCY2FP51841 1108 aa25.04■■□□□ 1.6
SMARCAL1-208ENST00000434435 RNASELQ05823 741 aaKnown RBP25.04■■□□□ 1.6
SMARCAL1-208ENST00000434435 FBXL13Q8NEE6 735 aa25.04■■□□□ 1.6
SMARCAL1-208ENST00000434435 CXXC1Q9P0U4 656 aaPredicted RBP25.04■■□□□ 1.6
SMARCAL1-208ENST00000434435 GCNT4Q9P109 453 aa25.04■■□□□ 1.6
SMARCAL1-208ENST00000434435 COQ4Q9Y3A0 265 aa25.04■■□□□ 1.6
SMARCAL1-208ENST00000434435 R3HCC1Q9Y3T6 440 aaKnown RBP25.04■■□□□ 1.6
SMARCAL1-208ENST00000434435 CAPN15O75808 1086 aa25.03■■□□□ 1.6
SMARCAL1-208ENST00000434435 HLA-DRAP01903 254 aa25.03■■□□□ 1.6
SMARCAL1-208ENST00000434435 ITGB3P05106 788 aa25.03■■□□□ 1.6
SMARCAL1-208ENST00000434435 ZNF75DP51815 510 aa25.03■■□□□ 1.6
SMARCAL1-208ENST00000434435 TUSC3Q13454 348 aa25.03■■□□□ 1.6
SMARCAL1-208ENST00000434435 TRPC3Q13507 836 aa25.03■■□□□ 1.6
SMARCAL1-208ENST00000434435 NCOA4Q13772 614 aa25.03■■□□□ 1.6
SMARCAL1-208ENST00000434435 NAB2Q15742 525 aa25.03■■□□□ 1.6
SMARCAL1-208ENST00000434435 EXOC3L4Q17RC7 722 aa25.03■■□□□ 1.6
SMARCAL1-208ENST00000434435 EPC2Q52LR7 807 aa25.03■■□□□ 1.6
SMARCAL1-208ENST00000434435 FAM117BQ6P1L5 589 aa25.03■■□□□ 1.6
SMARCAL1-208ENST00000434435 LRRC43Q8N309 656 aa25.03■■□□□ 1.6
SMARCAL1-208ENST00000434435 TAS1R2Q8TE23 839 aa25.03■■□□□ 1.6
SMARCAL1-208ENST00000434435 FAM193BQ96PV7 902 aaPredicted RBP25.03■■□□□ 1.6
SMARCAL1-208ENST00000434435 ERGIC2Q96RQ1 377 aa25.03■■□□□ 1.6
SMARCAL1-208ENST00000434435 CRACR2AQ9BSW2 395 aa25.03■■□□□ 1.6
SMARCAL1-208ENST00000434435 TBC1D13Q9NVG8 400 aa25.03■■□□□ 1.6
SMARCAL1-208ENST00000434435 NLRC5Q86WI3 1866 aa25.02■■□□□ 1.6
SMARCAL1-208ENST00000434435 H0YGN5 161 aa25.02■■□□□ 1.6
SMARCAL1-208ENST00000434435 VNN1O95497 513 aa25.02■■□□□ 1.6
SMARCAL1-208ENST00000434435 KRT19P08727 400 aa25.02■■□□□ 1.6
SMARCAL1-208ENST00000434435 LRPAP1P30533 357 aa25.02■■□□□ 1.6
SMARCAL1-208ENST00000434435 POLR2BP30876 1174 aaKnown RBP25.02■■□□□ 1.6
SMARCAL1-208ENST00000434435 SOX4Q06945 474 aaPredicted RBP25.02■■□□□ 1.6
SMARCAL1-208ENST00000434435 SYCP1Q15431 976 aa25.02■■□□□ 1.6
SMARCAL1-208ENST00000434435 PAN2Q504Q3 1202 aaKnown RBP25.02■■□□□ 1.6
SMARCAL1-208ENST00000434435 TMCO2Q7Z6W1 182 aaPredicted RBP25.02■■□□□ 1.6
SMARCAL1-208ENST00000434435 PHOSPHO2Q8TCD6 241 aa25.02■■□□□ 1.6
SMARCAL1-208ENST00000434435 GOLGA2P5Q9HBQ8 144 aa25.02■■□□□ 1.6
SMARCAL1-208ENST00000434435 RAB20Q9NX57 234 aa25.02■■□□□ 1.6
SMARCAL1-208ENST00000434435 SIX4Q9UIU6 781 aa25.02■■□□□ 1.6
SMARCAL1-208ENST00000434435 PDE4DIPQ5VU43 2346 aa25.01■■□□□ 1.59
SMARCAL1-208ENST00000434435 A0A1W2PQC6 194 aa25.01■■□□□ 1.59
SMARCAL1-208ENST00000434435 RBP5P82980 135 aa25.01■■□□□ 1.59
SMARCAL1-208ENST00000434435 RASIP1Q5U651 963 aa25.01■■□□□ 1.59
SMARCAL1-208ENST00000434435 CCDC150Q8NCX0 1101 aa25.01■■□□□ 1.59
SMARCAL1-208ENST00000434435 ZNF689Q96CS4 500 aaPredicted RBP25.01■■□□□ 1.59
SMARCAL1-208ENST00000434435 MRFAP1L1Q96HT8 127 aa25.01■■□□□ 1.59
SMARCAL1-208ENST00000434435 RNPC3Q96LT9 517 aaKnown RBP25.01■■□□□ 1.59
SMARCAL1-208ENST00000434435 PCMTD1Q96MG8 357 aaPredicted RBP25.01■■□□□ 1.59
SMARCAL1-208ENST00000434435 UROC1Q96N76 676 aa25.01■■□□□ 1.59
SMARCAL1-208ENST00000434435 YME1L1Q96TA2 773 aa25.01■■□□□ 1.59
SMARCAL1-208ENST00000434435 IMPG2Q9BZV3 1241 aa25.01■■□□□ 1.59
SMARCAL1-208ENST00000434435 UBE2OQ9C0C9 1292 aaKnown RBP25.01■■□□□ 1.59
SMARCAL1-208ENST00000434435 RC3H2Q9HBD1 1191 aaKnown RBP25.01■■□□□ 1.59
SMARCAL1-208ENST00000434435 CASTOR2A6NHX0 329 aa25■■□□□ 1.59
SMARCAL1-208ENST00000434435 CLSTN1O94985 981 aa25■■□□□ 1.59
SMARCAL1-208ENST00000434435 GJB5O95377 273 aa25■■□□□ 1.59
SMARCAL1-208ENST00000434435 ATP2A2P16615 1042 aaKnown RBP25■■□□□ 1.59
SMARCAL1-208ENST00000434435 DSC1Q08554 894 aa25■■□□□ 1.59
SMARCAL1-208ENST00000434435 C9orf50Q5SZB4 431 aa25■■□□□ 1.59
SMARCAL1-208ENST00000434435 C9orf57Q5W0N0 161 aa25■■□□□ 1.59
SMARCAL1-208ENST00000434435 CMTR2Q8IYT2 770 aaKnown RBP25■■□□□ 1.59
SMARCAL1-208ENST00000434435 TMEM130Q8N3G9 435 aa25■■□□□ 1.59
SMARCAL1-208ENST00000434435 SEMA4DQ92854 862 aa25■■□□□ 1.59
SMARCAL1-208ENST00000434435 ZNF560Q96MR9 790 aa25■■□□□ 1.59
SMARCAL1-208ENST00000434435 GDF15Q99988 308 aa25■■□□□ 1.59
SMARCAL1-208ENST00000434435 ZBED2Q9BTP6 218 aa25■■□□□ 1.59
SMARCAL1-208ENST00000434435 INTS2Q9H0H0 1204 aaKnown RBP25■■□□□ 1.59
SMARCAL1-208ENST00000434435 AGAP1Q9UPQ3 857 aa25■■□□□ 1.59
SMARCAL1-208ENST00000434435 SIK3Q9Y2K2 1263 aa25■■□□□ 1.59
SMARCAL1-208ENST00000434435 ANO9A1A5B4 782 aa24.99■■□□□ 1.59
SMARCAL1-208ENST00000434435 ADCY5O95622 1261 aa24.99■■□□□ 1.59
SMARCAL1-208ENST00000434435 CST3P01034 146 aaPredicted RBP24.99■■□□□ 1.59
SMARCAL1-208ENST00000434435 RPL9P32969 192 aaKnown RBP24.99■■□□□ 1.59
SMARCAL1-208ENST00000434435 KCNMA1Q12791 1236 aa24.99■■□□□ 1.59
SMARCAL1-208ENST00000434435 HERC6Q8IVU3 1022 aa24.99■■□□□ 1.59
SMARCAL1-208ENST00000434435 LRRC52Q8N7C0 313 aa24.99■■□□□ 1.59
SMARCAL1-208ENST00000434435 EHBP1Q8NDI1 1231 aa24.99■■□□□ 1.59
SMARCAL1-208ENST00000434435 CXorf38Q8TB03 319 aa24.99■■□□□ 1.59
SMARCAL1-208ENST00000434435 DDX27Q96GQ7 796 aaKnown RBP24.99■■□□□ 1.59
SMARCAL1-208ENST00000434435 LSM14BQ9BX40 385 aaKnown RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms