RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 ACTL7AQ9Y615 435 aa6.35□□□□□ -1.39
PTPN4-204ENST00000431283 GPR39O43194 453 aa6.34□□□□□ -1.39
PTPN4-204ENST00000431283 CKBP12277 381 aa6.34□□□□□ -1.39
PTPN4-204ENST00000431283 SLC6A2P23975 617 aa6.34□□□□□ -1.39
PTPN4-204ENST00000431283 GPR3P46089 330 aa6.34□□□□□ -1.39
PTPN4-204ENST00000431283 C21orf58P58505 322 aa6.34□□□□□ -1.39
PTPN4-204ENST00000431283 MRPS35P82673 323 aaKnown RBP6.34□□□□□ -1.39
PTPN4-204ENST00000431283 RNF219Q5W0B1 726 aaPredicted RBP6.34□□□□□ -1.39
PTPN4-204ENST00000431283 Q6ZNX1 250 aa6.34□□□□□ -1.39
PTPN4-204ENST00000431283 FITM2Q8N6M3 262 aa6.34□□□□□ -1.39
PTPN4-204ENST00000431283 BOLLQ8N9W6 283 aaKnown RBP6.34□□□□□ -1.39
PTPN4-204ENST00000431283 SIMC1Q8NDZ2 872 aa6.34□□□□□ -1.39
PTPN4-204ENST00000431283 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.34□□□□□ -1.39
PTPN4-204ENST00000431283 HOXB13Q92826 284 aaPredicted RBP6.34□□□□□ -1.39
PTPN4-204ENST00000431283 HEPHQ9BQS7 1158 aa6.34□□□□□ -1.39
PTPN4-204ENST00000431283 AIFM2Q9BRQ8 373 aa6.34□□□□□ -1.39
PTPN4-204ENST00000431283 SAP30BPQ9UHR5 308 aaKnown RBP6.34□□□□□ -1.39
PTPN4-204ENST00000431283 SIK3Q9Y2K2 1263 aa6.34□□□□□ -1.39
PTPN4-204ENST00000431283 GPR45Q9Y5Y3 372 aa6.34□□□□□ -1.39
PTPN4-204ENST00000431283 HMGXB3Q12766 1538 aa6.34□□□□□ -1.39
PTPN4-204ENST00000431283 BAZ1BQ9UIG0 1483 aaKnown RBP6.34□□□□□ -1.4
PTPN4-204ENST00000431283 AATKQ6ZMQ8 1374 aa6.33□□□□□ -1.4
PTPN4-204ENST00000431283 KIAA0391O15091 583 aaKnown RBP6.33□□□□□ -1.4
PTPN4-204ENST00000431283 PRKD3O94806 890 aa6.33□□□□□ -1.4
PTPN4-204ENST00000431283 FPR1P21462 350 aa6.33□□□□□ -1.4
PTPN4-204ENST00000431283 CLUL1Q15846 466 aa6.33□□□□□ -1.4
PTPN4-204ENST00000431283 SEM1Q6ZVN7 128 aa6.33□□□□□ -1.4
PTPN4-204ENST00000431283 PNKPQ96T60 521 aa6.33□□□□□ -1.4
PTPN4-204ENST00000431283 R3HDMLQ9H3Y0 253 aa6.33□□□□□ -1.4
PTPN4-204ENST00000431283 TMEM74BQ9NUR3 256 aa6.33□□□□□ -1.4
PTPN4-204ENST00000431283 FBXO34Q9NWN3 711 aa6.33□□□□□ -1.4
PTPN4-204ENST00000431283 USP25Q9UHP3 1055 aa6.33□□□□□ -1.4
PTPN4-204ENST00000431283 NESP48681 1621 aa6.32□□□□□ -1.4
PTPN4-204ENST00000431283 C1RP00736 705 aa6.32□□□□□ -1.4
PTPN4-204ENST00000431283 DDCP20711 480 aa6.32□□□□□ -1.4
PTPN4-204ENST00000431283 MTNR1BP49286 362 aa6.32□□□□□ -1.4
PTPN4-204ENST00000431283 KRT26Q7Z3Y9 468 aa6.32□□□□□ -1.4
PTPN4-204ENST00000431283 NLGN4YQ8NFZ3 816 aaPredicted RBP6.32□□□□□ -1.4
PTPN4-204ENST00000431283 NUP133Q8WUM0 1156 aa6.32□□□□□ -1.4
PTPN4-204ENST00000431283 MED15Q96RN5 788 aa6.32□□□□□ -1.4
PTPN4-204ENST00000431283 MYOCQ99972 504 aa6.32□□□□□ -1.4
PTPN4-204ENST00000431283 TMX1Q9H3N1 280 aa6.32□□□□□ -1.4
PTPN4-204ENST00000431283 GSTO2Q9H4Y5 243 aa6.32□□□□□ -1.4
PTPN4-204ENST00000431283 SLC23A1Q9UHI7 598 aa6.32□□□□□ -1.4
PTPN4-204ENST00000431283 PDS5BQ9NTI5 1447 aa6.32□□□□□ -1.4
PTPN4-204ENST00000431283 MYBBP1AQ9BQG0 1328 aaKnown RBP6.31□□□□□ -1.4
PTPN4-204ENST00000431283 TRGV11A0A075B6L2 103 aa6.31□□□□□ -1.4
PTPN4-204ENST00000431283 TCRBV7S2A1N4TA0A589 114 aa6.31□□□□□ -1.4
PTPN4-204ENST00000431283 CDHR4A6H8M9 788 aa6.31□□□□□ -1.4
PTPN4-204ENST00000431283 MYADML2A6NDP7 307 aa6.31□□□□□ -1.4
PTPN4-204ENST00000431283 WNT10BO00744 389 aa6.31□□□□□ -1.4
PTPN4-204ENST00000431283 ORC4O43929 436 aa6.31□□□□□ -1.4
PTPN4-204ENST00000431283 EYA4O95677 639 aa6.31□□□□□ -1.4
PTPN4-204ENST00000431283 PCSK1P29120 753 aa6.31□□□□□ -1.4
PTPN4-204ENST00000431283 SCAPQ12770 1279 aa6.31□□□□□ -1.4
PTPN4-204ENST00000431283 SEPT2Q15019 361 aa6.31□□□□□ -1.4
PTPN4-204ENST00000431283 GIMAP6Q6P9H5 292 aa6.31□□□□□ -1.4
PTPN4-204ENST00000431283 RSPH3Q86UC2 560 aa6.31□□□□□ -1.4
PTPN4-204ENST00000431283 RHOT1Q8IXI2 618 aa6.31□□□□□ -1.4
PTPN4-204ENST00000431283 TBC1D15Q8TC07 691 aa6.31□□□□□ -1.4
PTPN4-204ENST00000431283 ACTRT2Q8TDY3 377 aa6.31□□□□□ -1.4
PTPN4-204ENST00000431283 COG1Q8WTW3 980 aa6.31□□□□□ -1.4
PTPN4-204ENST00000431283 MARS2Q96GW9 593 aaKnown RBP6.31□□□□□ -1.4
PTPN4-204ENST00000431283 SMARCA4P51532 1647 aa6.31□□□□□ -1.4
PTPN4-204ENST00000431283 BAZ1AQ9NRL2 1556 aaPredicted RBP6.31□□□□□ -1.4
PTPN4-204ENST00000431283 PEX1O43933 1283 aa6.3□□□□□ -1.4
PTPN4-204ENST00000431283 PTH2RP49190 550 aa6.3□□□□□ -1.4
PTPN4-204ENST00000431283 VAV2P52735 878 aa6.3□□□□□ -1.4
PTPN4-204ENST00000431283 KRTAP1-1Q07627 177 aa6.3□□□□□ -1.4
PTPN4-204ENST00000431283 MTM1Q13496 603 aa6.3□□□□□ -1.4
PTPN4-204ENST00000431283 ZNF169Q14929 603 aaPredicted RBP6.3□□□□□ -1.4
PTPN4-204ENST00000431283 CYP2A13Q16696 494 aa6.3□□□□□ -1.4
PTPN4-204ENST00000431283 ZKSCAN2Q63HK3 967 aa6.3□□□□□ -1.4
PTPN4-204ENST00000431283 LHFPL2Q6ZUX7 228 aa6.3□□□□□ -1.4
PTPN4-204ENST00000431283 MIGA2Q7L4E1 593 aa6.3□□□□□ -1.4
PTPN4-204ENST00000431283 PPM1NQ8N819 430 aa6.3□□□□□ -1.4
PTPN4-204ENST00000431283 SSH1Q8WYL5 1049 aa6.3□□□□□ -1.4
PTPN4-204ENST00000431283 FUBP1Q96AE4 644 aaKnown RBP6.3□□□□□ -1.4
PTPN4-204ENST00000431283 SLC2A13Q96QE2 648 aa6.3□□□□□ -1.4
PTPN4-204ENST00000431283 MCM8Q9UJA3 840 aa6.3□□□□□ -1.4
PTPN4-204ENST00000431283 INTUQ9ULD6 942 aa6.3□□□□□ -1.4
PTPN4-204ENST00000431283 PRSS23O95084 383 aa6.29□□□□□ -1.4
PTPN4-204ENST00000431283 CDK4P11802 303 aa6.29□□□□□ -1.4
PTPN4-204ENST00000431283 ZNF37AP17032 561 aaPredicted RBP6.29□□□□□ -1.4
PTPN4-204ENST00000431283 AGXTP21549 392 aa6.29□□□□□ -1.4
PTPN4-204ENST00000431283 IL12RB1P42701 662 aa6.29□□□□□ -1.4
PTPN4-204ENST00000431283 SLC6A9P48067 706 aa6.29□□□□□ -1.4
PTPN4-204ENST00000431283 KLF1Q13351 362 aaPredicted RBP6.29□□□□□ -1.4
PTPN4-204ENST00000431283 ARHGEF25Q86VW2 580 aa6.29□□□□□ -1.4
PTPN4-204ENST00000431283 NTN5Q8WTR8 489 aaPredicted RBP6.29□□□□□ -1.4
PTPN4-204ENST00000431283 DPF2Q92785 391 aa6.29□□□□□ -1.4
PTPN4-204ENST00000431283 C11orf54Q9H0W9 315 aaPredicted RBP6.29□□□□□ -1.4
PTPN4-204ENST00000431283 UNKLQ9H9P5 680 aaKnown RBP6.29□□□□□ -1.4
PTPN4-204ENST00000431283 TDP1Q9NUW8 608 aa6.29□□□□□ -1.4
PTPN4-204ENST00000431283 KCTD5Q9NXV2 234 aa6.29□□□□□ -1.4
PTPN4-204ENST00000431283 PRKAB1Q9Y478 270 aa6.29□□□□□ -1.4
PTPN4-204ENST00000431283 TNFRSF18Q9Y5U5 241 aa6.29□□□□□ -1.4
PTPN4-204ENST00000431283 HAUS5O94927 633 aa6.28□□□□□ -1.4
PTPN4-204ENST00000431283 VIL1P09327 827 aaKnown RBP6.28□□□□□ -1.4
PTPN4-204ENST00000431283 NOMO3P69849 1222 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms