RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 CC2D1AQ6P1N0 951 aaPredicted RBP17.89■□□□□ 0.45
USHBP1-203ENST00000431146 TMEM270Q6UE05 265 aa17.89■□□□□ 0.45
USHBP1-203ENST00000431146 SLFN11Q7Z7L1 901 aa17.89■□□□□ 0.45
USHBP1-203ENST00000431146 KAT2BQ92831 832 aa17.89■□□□□ 0.45
USHBP1-203ENST00000431146 RPGRIP1Q96KN7 1286 aa17.89■□□□□ 0.45
USHBP1-203ENST00000431146 PDZD7Q9H5P4 517 aa17.89■□□□□ 0.45
USHBP1-203ENST00000431146 ZFYVE28Q9HCC9 887 aa17.89■□□□□ 0.45
USHBP1-203ENST00000431146 ZCCHC17Q9NP64 241 aaKnown RBP17.89■□□□□ 0.45
USHBP1-203ENST00000431146 CTTNBP2NLQ9P2B4 639 aa17.89■□□□□ 0.45
USHBP1-203ENST00000431146 ABT1Q9ULW3 272 aaKnown RBP17.89■□□□□ 0.45
USHBP1-203ENST00000431146 PCDHB4Q9Y5E5 795 aa17.89■□□□□ 0.45
USHBP1-203ENST00000431146 ZMYND10O75800 440 aa17.88■□□□□ 0.45
USHBP1-203ENST00000431146 PAFAH1B1P43034 410 aa17.88■□□□□ 0.45
USHBP1-203ENST00000431146 DUOXA2Q1HG44 320 aa17.88■□□□□ 0.45
USHBP1-203ENST00000431146 NT5DC3Q86UY8 548 aa17.88■□□□□ 0.45
USHBP1-203ENST00000431146 TAF4BQ92750 862 aa17.88■□□□□ 0.45
USHBP1-203ENST00000431146 RBM12Q9NTZ6 932 aaKnown RBP17.88■□□□□ 0.45
USHBP1-203ENST00000431146 GJD2Q9UKL4 321 aa17.88■□□□□ 0.45
USHBP1-203ENST00000431146 CEP350Q5VT06 3117 aa17.88■□□□□ 0.45
USHBP1-203ENST00000431146 MEFVO15553 781 aaPredicted RBP17.87■□□□□ 0.45
USHBP1-203ENST00000431146 ZEB2O60315 1214 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 CFHP08603 1231 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 TMEM191BP0C7N4 346 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 STAG3L1P0CL83 205 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 SMIM10L2AP0DMW4 78 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 SMIM10L2BP0DMW5 78 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 TUBB4BP68371 445 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 GPC5P78333 572 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 POU5F1BQ06416 359 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 CFAP221Q4G0U5 840 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 IMPG2Q9BZV3 1241 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 RPF1Q9H9Y2 349 aaKnown RBP17.87■□□□□ 0.45
USHBP1-203ENST00000431146 STXBP5LQ9Y2K9 1186 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 GZMAP12544 262 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 RGS2P41220 211 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 HIC1Q14526 733 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 FAM187BQ17R55 369 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 SCARA5Q6ZMJ2 495 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 ZNF572Q7Z3I7 529 aaPredicted RBP17.87■□□□□ 0.45
USHBP1-203ENST00000431146 SYCE1Q8N0S2 351 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 CCDC94Q9BW85 323 aaPredicted RBP17.87■□□□□ 0.45
USHBP1-203ENST00000431146 RAB21Q9UL25 225 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 TLL2Q9Y6L7 1015 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 HTTP42858 3142 aa17.87■□□□□ 0.45
USHBP1-203ENST00000431146 TMEM110-MUSTN1A8MSY1 372 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 F2P00734 622 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 ASS1P00966 412 aaKnown RBP17.86■□□□□ 0.45
USHBP1-203ENST00000431146 NFICP08651 508 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 CD58P19256 250 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 C2CD6Q53TS8 623 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 PHLDB2Q86SQ0 1253 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 IFNLR1Q8IU57 520 aaPredicted RBP17.86■□□□□ 0.45
USHBP1-203ENST00000431146 CPA5Q8WXQ8 436 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 ZNF653Q96CK0 615 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 BTBD6Q96KE9 485 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 FAM81BQ96LP2 452 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 LRRC1Q9BTT6 524 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 ARHGAP39Q9C0H5 1083 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 CDHR5Q9HBB8 845 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 PCDHB2Q9Y5E7 798 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 LACTBL1A8MY62 500 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 TSPAN1O60635 241 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 ZRANB2O95218 330 aaKnown RBP eCLIP17.86■□□□□ 0.45
USHBP1-203ENST00000431146 TBC1D8O95759 1140 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 MYL3P08590 195 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 KRT19P08727 400 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 AP3M2P53677 418 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 TRPC3Q13507 836 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 CLEC16AQ2KHT3 1053 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 RUFY4Q6ZNE9 571 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 PASD1Q8IV76 773 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 RHOT2Q8IXI1 618 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 RBBP8NLQ8NC74 664 aaPredicted RBP17.86■□□□□ 0.45
USHBP1-203ENST00000431146 HDAC7Q8WUI4 952 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 APBA2Q99767 749 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 AMFRQ9UKV5 643 aa17.86■□□□□ 0.45
USHBP1-203ENST00000431146 TRIP11Q15643 1979 aa17.85■□□□□ 0.45
USHBP1-203ENST00000431146 CCDC151A5D8V7 595 aa17.85■□□□□ 0.45
USHBP1-203ENST00000431146 CEP104O60308 925 aa17.85■□□□□ 0.45
USHBP1-203ENST00000431146 B4GALT4O60513 344 aa17.85■□□□□ 0.45
USHBP1-203ENST00000431146 ERLIN2O94905 339 aa17.85■□□□□ 0.45
USHBP1-203ENST00000431146 TBXAS1P24557 533 aaPredicted RBP17.85■□□□□ 0.45
USHBP1-203ENST00000431146 INHBEP58166 350 aa17.85■□□□□ 0.45
USHBP1-203ENST00000431146 ZNF200P98182 395 aaPredicted RBP17.85■□□□□ 0.45
USHBP1-203ENST00000431146 MFSD10Q14728 455 aa17.85■□□□□ 0.45
USHBP1-203ENST00000431146 SURF1Q15526 300 aa17.85■□□□□ 0.45
USHBP1-203ENST00000431146 ZNF394Q53GI3 561 aa17.85■□□□□ 0.45
USHBP1-203ENST00000431146 ANKRD36BP1Q96IX9 119 aa17.85■□□□□ 0.45
USHBP1-203ENST00000431146 ABCB6Q9NP58 842 aa17.85■□□□□ 0.45
USHBP1-203ENST00000431146 ARFGAP3Q9NP61 516 aa17.85■□□□□ 0.45
USHBP1-203ENST00000431146 TNNC2P02585 160 aa17.84■□□□□ 0.45
USHBP1-203ENST00000431146 GNA15P30679 374 aa17.84■□□□□ 0.45
USHBP1-203ENST00000431146 SLC7A5Q01650 507 aa17.84■□□□□ 0.45
USHBP1-203ENST00000431146 BRD3Q15059 726 aa17.84■□□□□ 0.45
USHBP1-203ENST00000431146 JADE1Q6IE81 842 aa17.84■□□□□ 0.45
USHBP1-203ENST00000431146 ACAD10Q6JQN1 1059 aa17.84■□□□□ 0.45
USHBP1-203ENST00000431146 MMGT1Q8N4V1 131 aa17.84■□□□□ 0.45
USHBP1-203ENST00000431146 CYFIP2Q96F07 1278 aa17.84■□□□□ 0.45
USHBP1-203ENST00000431146 HES6Q96HZ4 224 aa17.84■□□□□ 0.45
USHBP1-203ENST00000431146 NUP85Q9BW27 656 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms