RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 GPR62Q9BZJ7 368 aa27.24■■□□□ 1.95
CPNE1-212ENST00000430570 GZF1Q9H116 711 aaPredicted RBP27.24■■□□□ 1.95
CPNE1-212ENST00000430570 LMCD1Q9NZU5 365 aa27.24■■□□□ 1.95
CPNE1-212ENST00000430570 TMEM63CQ9P1W3 806 aa27.24■■□□□ 1.95
CPNE1-212ENST00000430570 ADAM28Q9UKQ2 775 aa27.24■■□□□ 1.95
CPNE1-212ENST00000430570 ATG2AQ2TAZ0 1938 aa27.23■■□□□ 1.95
CPNE1-212ENST00000430570 PTPRJQ12913 1337 aa27.23■■□□□ 1.95
CPNE1-212ENST00000430570 PSMA7O14818 248 aa27.23■■□□□ 1.95
CPNE1-212ENST00000430570 TADA2AO75478 443 aa27.23■■□□□ 1.95
CPNE1-212ENST00000430570 B3GAT3O94766 335 aa27.23■■□□□ 1.95
CPNE1-212ENST00000430570 LRPAP1P30533 357 aa27.23■■□□□ 1.95
CPNE1-212ENST00000430570 RPL9P32969 192 aaKnown RBP27.23■■□□□ 1.95
CPNE1-212ENST00000430570 PSMD6Q15008 389 aa27.23■■□□□ 1.95
CPNE1-212ENST00000430570 PTPROQ16827 1216 aa27.23■■□□□ 1.95
CPNE1-212ENST00000430570 EDRF1Q3B7T1 1238 aa27.23■■□□□ 1.95
CPNE1-212ENST00000430570 SCARA3Q6AZY7 606 aa27.23■■□□□ 1.95
CPNE1-212ENST00000430570 VPS52Q8N1B4 723 aa27.23■■□□□ 1.95
CPNE1-212ENST00000430570 BEST2Q8NFU1 509 aa27.23■■□□□ 1.95
CPNE1-212ENST00000430570 NELFBQ8WX92 580 aa27.23■■□□□ 1.95
CPNE1-212ENST00000430570 EEF2KMTQ96G04 330 aa27.23■■□□□ 1.95
CPNE1-212ENST00000430570 POP1Q99575 1024 aaKnown RBP27.23■■□□□ 1.95
CPNE1-212ENST00000430570 TLR9Q9NR96 1032 aa27.23■■□□□ 1.95
CPNE1-212ENST00000430570 MYO7AQ13402 2215 aa27.23■■□□□ 1.95
CPNE1-212ENST00000430570 PRRC2BQ5JSZ5 2229 aaKnown RBP27.22■■□□□ 1.95
CPNE1-212ENST00000430570 PPEF2O14830 753 aa27.22■■□□□ 1.95
CPNE1-212ENST00000430570 FSCN2O14926 492 aa27.22■■□□□ 1.95
CPNE1-212ENST00000430570 XPOTO43592 962 aaKnown RBP27.22■■□□□ 1.95
CPNE1-212ENST00000430570 AKAP3O75969 853 aa27.22■■□□□ 1.95
CPNE1-212ENST00000430570 PPP1R2P41236 205 aa27.22■■□□□ 1.95
CPNE1-212ENST00000430570 TFAMQ00059 246 aaKnown RBP27.22■■□□□ 1.95
CPNE1-212ENST00000430570 FUT10Q6P4F1 479 aa27.22■■□□□ 1.95
CPNE1-212ENST00000430570 RNF168Q8IYW5 571 aaPredicted RBP27.22■■□□□ 1.95
CPNE1-212ENST00000430570 CCDC127Q96BQ5 260 aa27.22■■□□□ 1.95
CPNE1-212ENST00000430570 TSG101Q99816 390 aa27.22■■□□□ 1.95
CPNE1-212ENST00000430570 CTNND2Q9UQB3 1225 aa27.22■■□□□ 1.95
CPNE1-212ENST00000430570 TMEM189-UBE2V1I3L0A0 370 aa27.21■■□□□ 1.95
CPNE1-212ENST00000430570 RPL13P26373 211 aaKnown RBP27.21■■□□□ 1.95
CPNE1-212ENST00000430570 BRCC3P46736 316 aa27.21■■□□□ 1.95
CPNE1-212ENST00000430570 STX17P56962 302 aa27.21■■□□□ 1.95
CPNE1-212ENST00000430570 SURF1Q15526 300 aa27.21■■□□□ 1.95
CPNE1-212ENST00000430570 CCDC183Q5T5S1 534 aa27.21■■□□□ 1.95
CPNE1-212ENST00000430570 NT5DC4Q86YG4 428 aa27.21■■□□□ 1.95
CPNE1-212ENST00000430570 OR5B17Q8NGF7 314 aa27.21■■□□□ 1.95
CPNE1-212ENST00000430570 TCF25Q9BQ70 676 aa27.21■■□□□ 1.95
CPNE1-212ENST00000430570 ZBP1Q9H171 429 aa27.21■■□□□ 1.95
CPNE1-212ENST00000430570 DPP3Q9NY33 737 aa27.21■■□□□ 1.95
CPNE1-212ENST00000430570 NLRP12P59046 1061 aa27.2■■□□□ 1.95
CPNE1-212ENST00000430570 LRRC63Q05C16 580 aa27.2■■□□□ 1.95
CPNE1-212ENST00000430570 TTI2Q6NXR4 508 aa27.2■■□□□ 1.95
CPNE1-212ENST00000430570 ZC3H3Q8IXZ2 948 aaKnown RBP27.2■■□□□ 1.95
CPNE1-212ENST00000430570 MICALL1Q8N3F8 863 aa27.2■■□□□ 1.95
CPNE1-212ENST00000430570 MICAL1Q8TDZ2 1067 aa27.2■■□□□ 1.95
CPNE1-212ENST00000430570 AUTS2Q8WXX7 1259 aa27.2■■□□□ 1.95
CPNE1-212ENST00000430570 DUSP9Q99956 384 aaKnown RBP27.2■■□□□ 1.95
CPNE1-212ENST00000430570 INTS13Q9NVM9 706 aa27.2■■□□□ 1.95
CPNE1-212ENST00000430570 FRMD4BQ9Y2L6 1034 aa27.2■■□□□ 1.95
CPNE1-212ENST00000430570 I3L4J1 428 aa27.19■■□□□ 1.94
CPNE1-212ENST00000430570 SOD2P04179 222 aa27.19■■□□□ 1.94
CPNE1-212ENST00000430570 DLATP10515 647 aaKnown RBP27.19■■□□□ 1.94
CPNE1-212ENST00000430570 DPCR1Q3MIW9 517 aa27.19■■□□□ 1.94
CPNE1-212ENST00000430570 PLPP4Q5VZY2 271 aa27.19■■□□□ 1.94
CPNE1-212ENST00000430570 C9orf57Q5W0N0 161 aa27.19■■□□□ 1.94
CPNE1-212ENST00000430570 TMC7Q7Z402 723 aa27.19■■□□□ 1.94
CPNE1-212ENST00000430570 ZNF516Q92618 1163 aa27.19■■□□□ 1.94
CPNE1-212ENST00000430570 B3GALT6Q96L58 329 aa27.19■■□□□ 1.94
CPNE1-212ENST00000430570 HERC2P3Q9BVR0 1158 aa27.19■■□□□ 1.94
CPNE1-212ENST00000430570 MTMR12Q9C0I1 747 aa27.19■■□□□ 1.94
CPNE1-212ENST00000430570 ANO9A1A5B4 782 aa27.18■■□□□ 1.94
CPNE1-212ENST00000430570 PIRO00625 290 aa27.18■■□□□ 1.94
CPNE1-212ENST00000430570 CETN3O15182 167 aa27.18■■□□□ 1.94
CPNE1-212ENST00000430570 CTSAP10619 480 aa27.18■■□□□ 1.94
CPNE1-212ENST00000430570 DLG4P78352 724 aa27.18■■□□□ 1.94
CPNE1-212ENST00000430570 PAK1Q13153 545 aa27.18■■□□□ 1.94
CPNE1-212ENST00000430570 CAVIN1Q6NZI2 390 aaKnown RBP27.18■■□□□ 1.94
CPNE1-212ENST00000430570 ADGRD2Q7Z7M1 963 aa27.18■■□□□ 1.94
CPNE1-212ENST00000430570 WDR49Q8IV35 697 aa27.18■■□□□ 1.94
CPNE1-212ENST00000430570 C1orf127Q8N9H9 656 aa27.18■■□□□ 1.94
CPNE1-212ENST00000430570 MLKLQ8NB16 471 aa27.18■■□□□ 1.94
CPNE1-212ENST00000430570 PARD3BQ8TEW8 1205 aa27.18■■□□□ 1.94
CPNE1-212ENST00000430570 CACTINQ8WUQ7 758 aaKnown RBP27.18■■□□□ 1.94
CPNE1-212ENST00000430570 MED15Q96RN5 788 aa27.18■■□□□ 1.94
CPNE1-212ENST00000430570 FNBP1Q96RU3 617 aa27.18■■□□□ 1.94
CPNE1-212ENST00000430570 CGRRF1Q99675 332 aa27.18■■□□□ 1.94
CPNE1-212ENST00000430570 ENTPD7Q9NQZ7 604 aa27.18■■□□□ 1.94
CPNE1-212ENST00000430570 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.18■■□□□ 1.94
CPNE1-212ENST00000430570 HIDE1A8MVS5 230 aa27.17■■□□□ 1.94
CPNE1-212ENST00000430570 MAPK13O15264 365 aa27.17■■□□□ 1.94
CPNE1-212ENST00000430570 TNNI1P19237 187 aa27.17■■□□□ 1.94
CPNE1-212ENST00000430570 PSMC2P35998 433 aaKnown RBP27.17■■□□□ 1.94
CPNE1-212ENST00000430570 FKBP3Q00688 224 aaKnown RBP27.17■■□□□ 1.94
CPNE1-212ENST00000430570 CCDC85BQ15834 202 aaPredicted RBP27.17■■□□□ 1.94
CPNE1-212ENST00000430570 FAM186BQ8IYM0 893 aa27.17■■□□□ 1.94
CPNE1-212ENST00000430570 CXorf38Q8TB03 319 aa27.17■■□□□ 1.94
CPNE1-212ENST00000430570 STXBP5LQ9Y2K9 1186 aa27.17■■□□□ 1.94
CPNE1-212ENST00000430570 SF3B1O75533 1304 aaKnown RBP eCLIP27.17■■□□□ 1.942e-6■■■■■ 85.9
CPNE1-212ENST00000430570 LRRIQ3A6PVS8 624 aaPredicted RBP27.16■■□□□ 1.94
CPNE1-212ENST00000430570 CXCL14O95715 111 aa27.16■■□□□ 1.94
CPNE1-212ENST00000430570 TMEM191BP0C7N4 346 aa27.16■■□□□ 1.94
CPNE1-212ENST00000430570 DUOXA2Q1HG44 320 aa27.16■■□□□ 1.94
CPNE1-212ENST00000430570 TIGD5Q53EQ6 642 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms