RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 CALUO43852 315 aaPredicted RBP13.48□□□□□ -0.25
USP40-205ENST00000430158 ZC3H11AO75152 810 aaKnown RBP eCLIP13.48□□□□□ -0.25
USP40-205ENST00000430158 AKAP3O75969 853 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 FGF18O76093 207 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 IL18RAPO95256 599 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 ALDH2P05091 517 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 CYP3A5P20815 502 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 LRPAP1P30533 357 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 PPP1R2P41236 205 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 GUCY2FP51841 1108 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 NLRP12P59046 1061 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 LRRC63Q05C16 580 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 PPP2R3AQ06190 1150 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 PSMD6Q15008 389 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 UPP1Q16831 310 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 DPCR1Q3MIW9 517 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 SPATA1Q5VX52 437 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 MLKLQ8NB16 471 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 C3orf58Q8NDZ4 430 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 FBXO22Q8NEZ5 403 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 NELFBQ8WX92 580 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 ZNF516Q92618 1163 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 RABGGTAQ92696 567 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 AAASQ9NRG9 546 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 RBAKQ9NYW8 714 aaPredicted RBP13.48□□□□□ -0.25
USP40-205ENST00000430158 SPG21Q9NZD8 308 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 TUBGCP4Q9UGJ1 667 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 PCDHB12Q9Y5F1 795 aa13.48□□□□□ -0.25
USP40-205ENST00000430158 ANO9A1A5B4 782 aa13.47□□□□□ -0.25
USP40-205ENST00000430158 CASTOR2A6NHX0 329 aa13.47□□□□□ -0.25
USP40-205ENST00000430158 TMEM189-UBE2V1I3L0A0 370 aa13.47□□□□□ -0.25
USP40-205ENST00000430158 PSMA7O14818 248 aa13.47□□□□□ -0.25
USP40-205ENST00000430158 EXOC3O60645 756 aa13.47□□□□□ -0.25
USP40-205ENST00000430158 CHRM1P11229 460 aaPredicted RBP13.47□□□□□ -0.25
USP40-205ENST00000430158 NR2F2P24468 414 aa13.47□□□□□ -0.25
USP40-205ENST00000430158 ALDH7A1P49419 539 aaKnown RBP13.47□□□□□ -0.25
USP40-205ENST00000430158 ADAM9Q13443 819 aa13.47□□□□□ -0.25
USP40-205ENST00000430158 GPM6BQ13491 265 aa13.47□□□□□ -0.25
USP40-205ENST00000430158 NFKBIBQ15653 356 aa13.47□□□□□ -0.25
USP40-205ENST00000430158 NT5DC4Q86YG4 428 aa13.47□□□□□ -0.25
USP40-205ENST00000430158 DEFB123Q8N688 67 aa13.47□□□□□ -0.25
USP40-205ENST00000430158 RDH13Q8NBN7 331 aa13.47□□□□□ -0.25
USP40-205ENST00000430158 PARD3BQ8TEW8 1205 aa13.47□□□□□ -0.25
USP40-205ENST00000430158 GDPD5Q8WTR4 605 aa13.47□□□□□ -0.25
USP40-205ENST00000430158 FAM161BQ96MY7 647 aa13.47□□□□□ -0.25
USP40-205ENST00000430158 FAM193BQ96PV7 902 aaPredicted RBP13.47□□□□□ -0.25
USP40-205ENST00000430158 C11orf84Q9BUA3 381 aaPredicted RBP13.47□□□□□ -0.25
USP40-205ENST00000430158 ALG13Q9NP73 1137 aaKnown RBP13.47□□□□□ -0.25
USP40-205ENST00000430158 SLC38A7Q9NVC3 462 aa13.47□□□□□ -0.25
USP40-205ENST00000430158 UBQLN1Q9UMX0 589 aaKnown RBP13.47□□□□□ -0.25
USP40-205ENST00000430158 LZTS1Q9Y250 596 aa13.47□□□□□ -0.25
USP40-205ENST00000430158 FAN1Q9Y2M0 1017 aa13.47□□□□□ -0.25
USP40-205ENST00000430158 CARNS1A5YM72 827 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 PIRO00625 290 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 PPEF2O14830 753 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 FSCN2O14926 492 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 KIF4AO95239 1232 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 PTMSP20962 102 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 RPL9P32969 192 aaKnown RBP13.46□□□□□ -0.25
USP40-205ENST00000430158 PPM1AP35813 382 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 AARSP49588 968 aaKnown RBP eCLIP13.46□□□□□ -0.25
USP40-205ENST00000430158 CLCNKBP51801 687 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 ENPEPQ07075 957 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 HSP90AA2PQ14568 343 aaPredicted RBP13.46□□□□□ -0.25
USP40-205ENST00000430158 TMEM132DQ14C87 1099 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 SPOUT1Q5T280 376 aaKnown RBP13.46□□□□□ -0.25
USP40-205ENST00000430158 KLHL10Q6JEL2 608 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 CAVIN1Q6NZI2 390 aaKnown RBP13.46□□□□□ -0.25
USP40-205ENST00000430158 DCLRE1AQ6PJP8 1040 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 TAS1R1Q7RTX1 841 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 DDX53Q86TM3 631 aaKnown RBP13.46□□□□□ -0.25
USP40-205ENST00000430158 OR5B17Q8NGF7 314 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 TMC2Q8TDI7 906 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 EEF2KMTQ96G04 330 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 DDX27Q96GQ7 796 aaKnown RBP13.46□□□□□ -0.25
USP40-205ENST00000430158 UROC1Q96N76 676 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 HS3ST6Q96QI5 342 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 POP1Q99575 1024 aaKnown RBP13.46□□□□□ -0.25
USP40-205ENST00000430158 CDX2Q99626 313 aaPredicted RBP13.46□□□□□ -0.25
USP40-205ENST00000430158 FUCA2Q9BTY2 467 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 MKNK1Q9BUB5 465 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 GPR62Q9BZJ7 368 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 INTS13Q9NVM9 706 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 SIX4Q9UIU6 781 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 RWDD2AQ9UIY3 292 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 CTNND2Q9UQB3 1225 aa13.46□□□□□ -0.25
USP40-205ENST00000430158 PRG3Q9Y2Y8 225 aaPredicted RBP13.46□□□□□ -0.25
USP40-205ENST00000430158 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.46□□□□□ -0.25
USP40-205ENST00000430158 PODXLO00592 558 aa13.45□□□□□ -0.26
USP40-205ENST00000430158 LILRB3O75022 631 aa13.45□□□□□ -0.26
USP40-205ENST00000430158 RPL13P26373 211 aaKnown RBP13.45□□□□□ -0.26
USP40-205ENST00000430158 OR1G1P47890 313 aa13.45□□□□□ -0.26
USP40-205ENST00000430158 STX17P56962 302 aa13.45□□□□□ -0.26
USP40-205ENST00000430158 ERVFC1P60507 584 aa13.45□□□□□ -0.26
USP40-205ENST00000430158 DLG4P78352 724 aa13.45□□□□□ -0.26
USP40-205ENST00000430158 FKBP3Q00688 224 aaKnown RBP13.45□□□□□ -0.26
USP40-205ENST00000430158 UBE3AQ05086 875 aa13.45□□□□□ -0.26
USP40-205ENST00000430158 PAK1Q13153 545 aa13.45□□□□□ -0.26
USP40-205ENST00000430158 STIM1Q13586 685 aa13.45□□□□□ -0.26
USP40-205ENST00000430158 GSE1Q14687 1217 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms