RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738		R4GN57	208 aa		19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	ANHX	E9PGG2	379 aa		19.4	■□□□□ 0.7
MRPL28-203	ENST00000429738	PDC	P20941	246 aa		19.4	■□□□□ 0.7
MRPL28-203	ENST00000429738	ZNF131	P52739	623 aa		19.4	■□□□□ 0.7
MRPL28-203	ENST00000429738	OSTN	P61366	133 aa		19.4	■□□□□ 0.7
MRPL28-203	ENST00000429738	CACNB1	Q02641	598 aa	Predicted RBP	19.4	■□□□□ 0.7
MRPL28-203	ENST00000429738	STRN3	Q13033	797 aa		19.4	■□□□□ 0.7
MRPL28-203	ENST00000429738	PDXDC1	Q6P996	788 aa		19.4	■□□□□ 0.7
MRPL28-203	ENST00000429738	CEP57	Q86XR8	500 aa		19.4	■□□□□ 0.7
MRPL28-203	ENST00000429738	CALML4	Q96GE6	196 aa		19.4	■□□□□ 0.7
MRPL28-203	ENST00000429738	ACAP3	Q96P50	834 aa		19.4	■□□□□ 0.7
MRPL28-203	ENST00000429738	PRKD2	Q9BZL6	878 aa		19.4	■□□□□ 0.7
MRPL28-203	ENST00000429738	SLC38A7	Q9NVC3	462 aa		19.4	■□□□□ 0.7
MRPL28-203	ENST00000429738	VPS37C	A5D8V6	355 aa	Predicted RBP	19.39	■□□□□ 0.69
MRPL28-203	ENST00000429738	ZMYND10	O75800	440 aa		19.39	■□□□□ 0.69
MRPL28-203	ENST00000429738	DCN	P07585	359 aa	Known RBP	19.39	■□□□□ 0.69
MRPL28-203	ENST00000429738	PLCG1	P19174	1290 aa		19.39	■□□□□ 0.69
MRPL28-203	ENST00000429738	MCL1	Q07820	350 aa		19.39	■□□□□ 0.69
MRPL28-203	ENST00000429738	NOLC1	Q14978	699 aa	Known RBP eCLIP	19.39	■□□□□ 0.69
MRPL28-203	ENST00000429738	KARS	Q15046	597 aa	Known RBP	19.39	■□□□□ 0.69
MRPL28-203	ENST00000429738	PTPA	Q15257	358 aa		19.39	■□□□□ 0.69
MRPL28-203	ENST00000429738	SPECC1	Q5M775	1068 aa		19.39	■□□□□ 0.69
MRPL28-203	ENST00000429738	RMDN1	Q96DB5	314 aa		19.39	■□□□□ 0.69
MRPL28-203	ENST00000429738	INTS4	Q96HW7	963 aa	Known RBP	19.39	■□□□□ 0.69
MRPL28-203	ENST00000429738	REEP2	Q9BRK0	252 aa		19.39	■□□□□ 0.69
MRPL28-203	ENST00000429738	TCHP	Q9BT92	498 aa		19.39	■□□□□ 0.69
MRPL28-203	ENST00000429738	CCSER1	Q9C0I3	900 aa		19.39	■□□□□ 0.69
MRPL28-203	ENST00000429738	ARHGEF3	Q9NR81	526 aa		19.39	■□□□□ 0.69
MRPL28-203	ENST00000429738	SLC2A4RG	Q9NR83	387 aa		19.39	■□□□□ 0.69
MRPL28-203	ENST00000429738	DLGAP2	Q9P1A6	1054 aa		19.39	■□□□□ 0.69
MRPL28-203	ENST00000429738	MTRR	Q9UBK8	725 aa		19.39	■□□□□ 0.69
MRPL28-203	ENST00000429738	DMXL1	Q9Y485	3027 aa		19.39	■□□□□ 0.69
MRPL28-203	ENST00000429738		H0YCG3	227 aa		19.38	■□□□□ 0.69
MRPL28-203	ENST00000429738	ADAM12	O43184	909 aa		19.38	■□□□□ 0.69
MRPL28-203	ENST00000429738	SYT1	P21579	422 aa		19.38	■□□□□ 0.69
MRPL28-203	ENST00000429738	HTR4	Q13639	388 aa		19.38	■□□□□ 0.69
MRPL28-203	ENST00000429738	ZC3H14	Q6PJT7	736 aa	Known RBP	19.38	■□□□□ 0.69
MRPL28-203	ENST00000429738	GPBP1	Q86WP2	473 aa		19.38	■□□□□ 0.69
MRPL28-203	ENST00000429738	C1orf210	Q8IVY1	113 aa		19.38	■□□□□ 0.69
MRPL28-203	ENST00000429738	RAD54L	Q92698	747 aa		19.38	■□□□□ 0.69
MRPL28-203	ENST00000429738	DDX27	Q96GQ7	796 aa	Known RBP	19.38	■□□□□ 0.69
MRPL28-203	ENST00000429738	HAPLN2	Q9GZV7	340 aa		19.38	■□□□□ 0.69
MRPL28-203	ENST00000429738	CLIC4	Q9Y696	253 aa		19.38	■□□□□ 0.69
MRPL28-203	ENST00000429738	FANCM	Q8IYD8	2048 aa		19.37	■□□□□ 0.69
MRPL28-203	ENST00000429738	TRAPPC3	O43617	180 aa		19.37	■□□□□ 0.69
MRPL28-203	ENST00000429738	SP9	P0CG40	484 aa		19.37	■□□□□ 0.69
MRPL28-203	ENST00000429738	HARS	P12081	509 aa	Known RBP	19.37	■□□□□ 0.69
MRPL28-203	ENST00000429738	TKT	P29401	623 aa	Known RBP	19.37	■□□□□ 0.69
MRPL28-203	ENST00000429738	BRCC3	P46736	316 aa		19.37	■□□□□ 0.69
MRPL28-203	ENST00000429738	REST	Q13127	1097 aa		19.37	■□□□□ 0.69
MRPL28-203	ENST00000429738	RAB33A	Q14088	237 aa		19.37	■□□□□ 0.69
MRPL28-203	ENST00000429738	MCM6	Q14566	821 aa		19.37	■□□□□ 0.69
MRPL28-203	ENST00000429738	SLC10A6	Q3KNW5	377 aa		19.37	■□□□□ 0.69
MRPL28-203	ENST00000429738	RSPO2	Q6UXX9	243 aa	Predicted RBP	19.37	■□□□□ 0.69
MRPL28-203	ENST00000429738	HAUS6	Q7Z4H7	955 aa		19.37	■□□□□ 0.69
MRPL28-203	ENST00000429738	KIAA2013	Q8IYS2	634 aa		19.37	■□□□□ 0.69
MRPL28-203	ENST00000429738	FIZ1	Q96SL8	496 aa		19.37	■□□□□ 0.69
MRPL28-203	ENST00000429738	ANKFY1	Q9P2R3	1169 aa		19.37	■□□□□ 0.69
MRPL28-203	ENST00000429738	BACE2	Q9Y5Z0	518 aa		19.37	■□□□□ 0.69
MRPL28-203	ENST00000429738	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	19.37	■□□□□ 0.69
MRPL28-203	ENST00000429738	GPR179	Q6PRD1	2367 aa		19.37	■□□□□ 0.69
MRPL28-203	ENST00000429738	NOTCH4	Q99466	2003 aa		19.36	■□□□□ 0.69
MRPL28-203	ENST00000429738	PODXL	O00592	558 aa		19.36	■□□□□ 0.69
MRPL28-203	ENST00000429738	CLDN3	O15551	220 aa		19.36	■□□□□ 0.69
MRPL28-203	ENST00000429738	PIGR	P01833	764 aa		19.36	■□□□□ 0.69
MRPL28-203	ENST00000429738	SCP2	P22307	547 aa		19.36	■□□□□ 0.69
MRPL28-203	ENST00000429738	HOXA9	P31269	272 aa		19.36	■□□□□ 0.69
MRPL28-203	ENST00000429738	GET4	Q7L5D6	327 aa	Predicted RBP	19.36	■□□□□ 0.69
MRPL28-203	ENST00000429738	DGLUCY	Q7Z3D6	616 aa		19.36	■□□□□ 0.69
MRPL28-203	ENST00000429738	LARP4B	Q92615	738 aa	Known RBP	19.36	■□□□□ 0.69
MRPL28-203	ENST00000429738	PARVG	Q9HBI0	331 aa		19.36	■□□□□ 0.69
MRPL28-203	ENST00000429738	NUMBL	Q9Y6R0	609 aa		19.36	■□□□□ 0.69
MRPL28-203	ENST00000429738	DNAH14	Q0VDD8	3507 aa		19.36	■□□□□ 0.69
MRPL28-203	ENST00000429738	NCOR2	Q9Y618	2525 aa		19.35	■□□□□ 0.69
MRPL28-203	ENST00000429738	HNRNPA1	P09651	372 aa	Known RBP eCLIP	19.35	■□□□□ 0.69
MRPL28-203	ENST00000429738	FSHR	P23945	695 aa		19.35	■□□□□ 0.69
MRPL28-203	ENST00000429738	RPL9	P32969	192 aa	Known RBP	19.35	■□□□□ 0.69
MRPL28-203	ENST00000429738	OR1D2	P34982	312 aa		19.35	■□□□□ 0.69
MRPL28-203	ENST00000429738	DDIT3	P35638	169 aa		19.35	■□□□□ 0.69
MRPL28-203	ENST00000429738	STARD6	P59095	220 aa		19.35	■□□□□ 0.69
MRPL28-203	ENST00000429738	PUM1	Q14671	1186 aa	Known RBP eCLIP	19.35	■□□□□ 0.69
MRPL28-203	ENST00000429738	SEZ6	Q53EL9	994 aa		19.35	■□□□□ 0.69
MRPL28-203	ENST00000429738	ANKS3	Q6ZW76	656 aa		19.35	■□□□□ 0.69
MRPL28-203	ENST00000429738	USP49	Q70CQ1	688 aa		19.35	■□□□□ 0.69
MRPL28-203	ENST00000429738	RUBCN	Q92622	972 aa		19.35	■□□□□ 0.69
MRPL28-203	ENST00000429738	C18orf25	Q96B23	403 aa	Predicted RBP	19.35	■□□□□ 0.69
MRPL28-203	ENST00000429738	SHD	Q96IW2	340 aa		19.35	■□□□□ 0.69
MRPL28-203	ENST00000429738	EPSTI1	Q96J88	318 aa		19.35	■□□□□ 0.69
MRPL28-203	ENST00000429738	FBXO2	Q9UK22	296 aa	Predicted RBP	19.35	■□□□□ 0.69
MRPL28-203	ENST00000429738	TBX20	Q9UMR3	447 aa		19.35	■□□□□ 0.69
MRPL28-203	ENST00000429738	SRPRB	Q9Y5M8	271 aa	Known RBP	19.35	■□□□□ 0.69
MRPL28-203	ENST00000429738	MORC2	Q9Y6X9	1032 aa	Predicted RBP	19.35	■□□□□ 0.69
MRPL28-203	ENST00000429738	FRYL	O94915	3013 aa		19.35	■□□□□ 0.69
MRPL28-203	ENST00000429738	MED19	A0JLT2	244 aa	Predicted RBP	19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738		I3L4J1	428 aa		19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	TRAK2	O60296	914 aa		19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	FAM189A1	O60320	539 aa		19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	TBC1D4	O60343	1298 aa		19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	FAM13A	O94988	1023 aa		19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	C8A	P07357	584 aa		19.34	■□□□□ 0.69

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms