RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 GCNT4Q9P109 453 aa18.43■□□□□ 0.54
LINC00887-203ENST00000429578 INPPL1O15357 1258 aa18.42■□□□□ 0.54
LINC00887-203ENST00000429578 EPC2Q52LR7 807 aa18.42■□□□□ 0.54
LINC00887-203ENST00000429578 C9orf50Q5SZB4 431 aa18.42■□□□□ 0.54
LINC00887-203ENST00000429578 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.42■□□□□ 0.54
LINC00887-203ENST00000429578 Q7L0L9 218 aa18.42■□□□□ 0.54
LINC00887-203ENST00000429578 C16orf59Q7L2K0 433 aa18.42■□□□□ 0.54
LINC00887-203ENST00000429578 LRFN2Q9ULH4 789 aa18.42■□□□□ 0.54
LINC00887-203ENST00000429578 UBQLN1Q9UMX0 589 aaKnown RBP18.42■□□□□ 0.54
LINC00887-203ENST00000429578 SIK3Q9Y2K2 1263 aa18.42■□□□□ 0.54
LINC00887-203ENST00000429578 ITIH6Q6UXX5 1313 aa18.41■□□□□ 0.54
LINC00887-203ENST00000429578 XPOTO43592 962 aaKnown RBP18.41■□□□□ 0.54
LINC00887-203ENST00000429578 OFD1O75665 1012 aa18.41■□□□□ 0.54
LINC00887-203ENST00000429578 PON1P27169 355 aa18.41■□□□□ 0.54
LINC00887-203ENST00000429578 AFF1P51825 1210 aaKnown RBP18.41■□□□□ 0.54
LINC00887-203ENST00000429578 SPECC1LQ69YQ0 1117 aa18.41■□□□□ 0.54
LINC00887-203ENST00000429578 GLB1LQ6UWU2 654 aa18.41■□□□□ 0.54
LINC00887-203ENST00000429578 NPAS4Q8IUM7 802 aa18.41■□□□□ 0.54
LINC00887-203ENST00000429578 LMO3Q8TAP4 145 aa18.41■□□□□ 0.54
LINC00887-203ENST00000429578 TAS1R2Q8TE23 839 aa18.41■□□□□ 0.54
LINC00887-203ENST00000429578 PPP1R10Q96QC0 940 aaKnown RBP18.41■□□□□ 0.54
LINC00887-203ENST00000429578 RNF19AQ9NV58 838 aa18.41■□□□□ 0.54
LINC00887-203ENST00000429578 PHACTR2O75167 634 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 VNN1O95497 513 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 THP07101 528 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 SLC9A1P19634 815 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 CYP3A5P20815 502 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 CLLU1OSQ5K130 101 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 TRIM65Q6PJ69 517 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 C1orf127Q8N9H9 656 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 EHBP1Q8NDI1 1231 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 BEST2Q8NFU1 509 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 HELQQ8TDG4 1101 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 PCMTD1Q96MG8 357 aaPredicted RBP18.4■□□□□ 0.54
LINC00887-203ENST00000429578 SLC38A7Q9NVC3 462 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 RAB20Q9NX57 234 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 MIOSQ9NXC5 875 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 DPP3Q9NY33 737 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 ITGA11Q9UKX5 1188 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 PLAGL2Q9UPG8 496 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.4■□□□□ 0.54
LINC00887-203ENST00000429578 HOXA2O43364 376 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 FGBP02675 491 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 FGFR1P11362 822 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 PIK3CAP42336 1068 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 KLK7P49862 253 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 SCNN1GP51170 649 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 PSRC1Q6PGN9 363 aaPredicted RBP18.4■□□□□ 0.54
LINC00887-203ENST00000429578 ZNF365Q70YC5 407 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 SEMA4DQ92854 862 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 C18orf25Q96B23 403 aaPredicted RBP18.4■□□□□ 0.54
LINC00887-203ENST00000429578 TUBGCP4Q9UGJ1 667 aa18.4■□□□□ 0.54
LINC00887-203ENST00000429578 LAMA2P24043 3122 aaKnown RBP18.39■□□□□ 0.53
LINC00887-203ENST00000429578 CST3P01034 146 aaPredicted RBP18.39■□□□□ 0.53
LINC00887-203ENST00000429578 HLA-DRAP01903 254 aa18.39■□□□□ 0.53
LINC00887-203ENST00000429578 AMHP03971 560 aa18.39■□□□□ 0.53
LINC00887-203ENST00000429578 ITGB3P05106 788 aa18.39■□□□□ 0.53
LINC00887-203ENST00000429578 WDR5P61964 334 aaKnown RBP18.39■□□□□ 0.53
LINC00887-203ENST00000429578 GRIK3Q13003 919 aa18.39■□□□□ 0.53
LINC00887-203ENST00000429578 TRPC3Q13507 836 aa18.39■□□□□ 0.53
LINC00887-203ENST00000429578 NCOA4Q13772 614 aa18.39■□□□□ 0.53
LINC00887-203ENST00000429578 NAB2Q15742 525 aa18.39■□□□□ 0.53
LINC00887-203ENST00000429578 OTOP2Q7RTS6 562 aa18.39■□□□□ 0.53
LINC00887-203ENST00000429578 TMC6Q7Z403 805 aa18.39■□□□□ 0.53
LINC00887-203ENST00000429578 DRC7Q8IY82 874 aa18.39■□□□□ 0.53
LINC00887-203ENST00000429578 CXorf38Q8TB03 319 aa18.39■□□□□ 0.53
LINC00887-203ENST00000429578 RSPH1Q8WYR4 309 aa18.39■□□□□ 0.53
LINC00887-203ENST00000429578 INTS2Q9H0H0 1204 aaKnown RBP18.39■□□□□ 0.53
LINC00887-203ENST00000429578 PLCB1Q9NQ66 1216 aa18.39■□□□□ 0.53
LINC00887-203ENST00000429578 SIX4Q9UIU6 781 aa18.39■□□□□ 0.53
LINC00887-203ENST00000429578 INPP5FQ9Y2H2 1132 aa18.39■□□□□ 0.53
LINC00887-203ENST00000429578 LRRN2O75325 713 aa18.38■□□□□ 0.53
LINC00887-203ENST00000429578 POMCP01189 267 aa18.38■□□□□ 0.53
LINC00887-203ENST00000429578 GUCY2FP51841 1108 aa18.38■□□□□ 0.53
LINC00887-203ENST00000429578 EPHB4P54760 987 aa18.38■□□□□ 0.53
LINC00887-203ENST00000429578 SOX4Q06945 474 aaPredicted RBP18.38■□□□□ 0.53
LINC00887-203ENST00000429578 NOMO2Q5JPE7 1267 aa18.38■□□□□ 0.53
LINC00887-203ENST00000429578 DPY19L2P1Q6NXN4 242 aa18.38■□□□□ 0.53
LINC00887-203ENST00000429578 ABI1Q8IZP0 508 aa18.38■□□□□ 0.53
LINC00887-203ENST00000429578 URGCPQ8TCY9 931 aa18.38■□□□□ 0.53
LINC00887-203ENST00000429578 TOP1MTQ969P6 601 aa18.38■□□□□ 0.53
LINC00887-203ENST00000429578 PDLIM2Q96JY6 352 aa18.38■□□□□ 0.53
LINC00887-203ENST00000429578 NUP58Q9BVL2 599 aa18.38■□□□□ 0.53
LINC00887-203ENST00000429578 LSM14BQ9BX40 385 aaKnown RBP18.38■□□□□ 0.53
LINC00887-203ENST00000429578 FAM207AQ9NSI2 230 aaPredicted RBP18.38■□□□□ 0.53
LINC00887-203ENST00000429578 KANSL3Q9P2N6 904 aa18.38■□□□□ 0.53
LINC00887-203ENST00000429578 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.38■□□□□ 0.53
LINC00887-203ENST00000429578 COL4A6Q14031 1691 aa18.38■□□□□ 0.53
LINC00887-203ENST00000429578 ZC3H11AO75152 810 aaKnown RBP eCLIP18.37■□□□□ 0.53
LINC00887-203ENST00000429578 KRT19P08727 400 aa18.37■□□□□ 0.53
LINC00887-203ENST00000429578 TRIM21P19474 475 aaKnown RBP18.37■□□□□ 0.53
LINC00887-203ENST00000429578 KCNJ6P48051 423 aa18.37■□□□□ 0.53
LINC00887-203ENST00000429578 FIGNQ5HY92 759 aa18.37■□□□□ 0.53
LINC00887-203ENST00000429578 TMEM240Q5SV17 173 aa18.37■□□□□ 0.53
LINC00887-203ENST00000429578 SCARA3Q6AZY7 606 aa18.37■□□□□ 0.53
LINC00887-203ENST00000429578 NEK11Q8NG66 645 aa18.37■□□□□ 0.53
LINC00887-203ENST00000429578 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.37■□□□□ 0.53
LINC00887-203ENST00000429578 SIX2Q9NPC8 291 aa18.37■□□□□ 0.53
LINC00887-203ENST00000429578 MTMR10Q9NXD2 777 aa18.37■□□□□ 0.53
LINC00887-203ENST00000429578 ASS1P00966 412 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms